Conserved Protein Domain Family
Atl1

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COG3695: Atl1 (this model, PSSM-Id:226219 is obsolete and has been replaced by 442910)
Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domain [Transcription]
Statistics
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PSSM-Id: 226219
Aligned: 14 rows
Threshold Bit Score: 117.844
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
16123301  78 PPVADSFRQRVFHVVAAIPYGQVATYGDIAQLIGSPRAARQVGGVLKRLPEGSALPWHRVINRYGEISLTGD--DYLRQK 155 Yersinia pestis
19551399   3 ELEFDELTSMVLDCADLIPQGKVATYGDIAKIVGTG--PRQVGRIMA--TAGQFTSWWRVVRSDGGSQVAGTarSKWAEE 78  Corynebacterium glu...
15805455  25 QPIAAPFRQQLLDLVARIPPGRVMTYGQLALLAGQPGAARQAGAVMHS-LKDSDLPWQRVINAQGRVSTYKVg-LGEVQE 102 Deinococcus radiodu...
15842791   2 APVTDEQVELVRSLVAAIPLGRVSTYGDIAALAGLS-SPRIVGWIMR--TDSSDLPWHRVIRASGRPAQH----LATRQL 74  Mycobacterium tuber...
15599588  22 PASAQARREALYLVLAQVPPGQVVSYGQLAELAGLGRAARWVGRTLSQLPVDTRLPWHRVLGAGGRISLPADspGGREQR 101 Pseudomonas aerugin...
15610340   2 APVTDEQVELVRSLVAAIPLGRVSTYGDIAALTGLS-SPRIVGWIMR--TDSSDLPWHRVIRASGRPAQH----LATRQL 74  Mycobacterium tuber...
19115770   1 -MRMDEFYTKVYDAVCEIPYGKVSTYGEIARYVGMPSYARQVGQAMKHLHPETHVPWHRVINSRGTISKRDIsaGEQRQK 79  fission yeast
16763847  27 mdIQDTFPQRVWQIVASIPEGFVTTYGDVARLAGSPRAARQVGGVLKRLPEGSTLPWHRVVNRHGAISLTGP--DLQRQR 104 Salmonella typhimur...
15641078   1 ---MDQFLQQIFVVIHQIPVGRVSTYGAIAKMAGYPGYARHVGKALGHLPEGSQLPWFRVINSQGKISLQGE--DFVRQR 75  Vibrio cholerae
16799655   1 -MVPADFEERVYTVVRQIPRGKVTTYGQIAYMIGFPKNARLVGATLKHSKRDQITPCHRVVNAAGRLVPN-----WEEQR 74  Listeria innocua
16123301 156 KALVAEGICLDAA------GRINLQQYRWRY 180 Yersinia pestis
19551399  79 NIAFSELSAPKVRmqqhrlSEEELETIAGKL 109 Corynebacterium glutamicum ATCC 13032
15805455 103 GLLRAEGIEFDDA------GRCDLSRYQWWP 127 Deinococcus radiodurans
15842791  75 ELLRAEGVLSVD-------GRVALSEIRYEF 98  Mycobacterium tuberculosis CDC1551
15599588 102 ARLREEGVLLHN-------DRVDIRRHGWLT 125 Pseudomonas aeruginosa PA01
15610340  75 ELLRAEGVLSVD-------GRVALSEIRYEF 98  Mycobacterium tuberculosis H37Rv
19115770  80 DRLEEEGVEIYQTsl--geYKLNLPEYMWKP 108 fission yeast
16763847 105 QALLAEGVVVSGS------GQIDLQRYRWVY 129 Salmonella typhimurium LT2
15641078  76 QLLLAEGIEVSDT------GKISLRKYQWQL 100 Vibrio cholerae
16799655  75 ELLLSEGVTFKEN------GHVKMKDHFWQ- 98  Listeria innocua
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