6B2E


Conserved Protein Domain Family
AMPKBI
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pfam04739: AMPKBI (this model, PSSM-Id:398422 is obsolete and has been replaced by 461416)
5'-AMP-activated protein kinase beta subunit, interaction domain
This region is found in the beta subunit of the 5'-AMP-activated protein kinase complex, and its yeast homologs Sip1, Sip2 and Gal83, which are found in the SNF1 kinase complex. This region is sufficient for interaction of this subunit with the kinase complex, but is not solely responsible for the interaction, and the interaction partner is not known. The isoamylase N-terminal domain (pfam02922) is sometimes found in proteins belonging to this family.
Links
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Statistics
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PSSM-Id: 398422
Aligned: 92 rows
Threshold Bit Score: 50.235
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
6B2E_B       203 KSPPILPPHLLQVILNK--------------------DTNISCDPALLPEPNHVMLNHLYALSIKD--SVMVLSATHRYK 260
XP_005851455 136 KEPPVMPPQLQLSLLNV---------------------PPAMDAIAALPRPQHVILNHIYLQRMTTstQAMVVGTTHRYR 194 Chlorella varia...
XP_002947465 186 KEPPAMPAHLQLTLLNV---------------------PPALDAQAVLPRPQHVILNHVYCQRGQNv-QALVVGTTTRYK 243 Volvox carteri ...
XP_001416754 200 KEPPPLPPQLHMTLLNM---------------------PMVPDAPNLLPRPQHVVLNHTYCDGTKSesGVQVLGTTHRYR 258 Ostreococcus lu...
XP_003054854 158 KEPPACPPHLHLTLLNM---------------------PQIPDAPNLLPRPQHVVLNHMYNDRTKQqrGQHVMGTTHRYR 216 Micromonas pusi...
CAM36559     177 KYPPIVPLHLRYTPLNTpptlvrcsrdgrmavmdtggEHNSRVPPEHLPLPLSVTINHVYFQRRED---HAVMGVTTRYC 253 Leishmania braz...
Q4DYN9       224 NYPPIAPVHLRYTPLNTpptavrc------trdgvisSAGEIMSPENLPLPLNVTINHVYFQRRED---HSVMGLTTRYC 294 Trypanosoma cruzi
XP_015169014 211 EKLPDLPPLLQQTPLDQ--------------------PSSSAGSVETFQKPLPAVLNHLYIQKTRSsqSMVVLSSTHRFR 270 potato
EEF32157     213 KQPPDIPPQLQLTMLND---------------------RSAAESHPTLPRPRHAVLNHLYIQNNRG--QPVALGTSHRFL 269 castor bean
KRH14060     158 KPPPELPPQLPVAIRHE--------------------ASSSASGSRFVPRPTHLELNHLYIHKTDRg-QFVALRSTYKFQ 216 soybean

6B2E_B       261 KKYVTTLLYKP 271
XP_005851455 195 SKYVTTVM--- 202 Chlorella variabilis
XP_002947465 244 SKYITTVMYKP 254 Volvox carteri f. nagariensis
XP_001416754 259 SKYITVVFlka 269 Ostreococcus lucimarinus CCE9901
XP_003054854 217 SKYVTVVFVKP 227 Micromonas pusilla CCMP1545
CAM36559     254 NKYTTVVYYSh 264 Leishmania braziliensis MHOM/BR/75/M2904
Q4DYN9       295 NKYTTVVYYSr 305 Trypanosoma cruzi
XP_015169014 271 TKYVTAVLYKs 281 potato
EEF32157     270 HKYVTVVLYKP 280 castor bean
KRH14060     217 HKYITTELYKs 227 soybean
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