Conserved Protein Domain Family
HP_OMP_2

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pfam02521: HP_OMP_2 (this model, PSSM-Id:334957 is obsolete and has been replaced by 426814)
Putative outer membrane protein
This family consists of putative outer membrane proteins from Helicobacter pylori (campylobacter pylori).
Statistics
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PSSM-Id: 334957
Aligned: 23 rows
Threshold Bit Score: 410.553
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CBY83529      12 ASSSlglcaLDAITYEVHGDLINFSKVGFNNNPINPVKGLYPTGTFVELTGKLESTMHL--------GKGWSVSIGGALG 83  Helicobacter fe...
O25230        23 TTGS-----LGAVTYEVHGDFINFAKVGFNHSPINPVKGIYPTETFVNLTGKLEGSVHL--------GRGWTVNLGGVLG 89  Helicobacter py...
CBY83596      10 FPLS-----LLAFDYKISGRVGSLSRIGFNHSAINSDKGIYPTGTYVTAVGALQIDVNLlpk--svsAHKLSAGLGGELG 82  Helicobacter fe...
O25000        14 HGVF-----LNAFEYQISARVGSFSRIAFNQSVINSKKGIYPTGSYVTTTGALQVDLSLlpk--gieNHKLGFGVGGEIG 86  Helicobacter py...
CBY83388       9 VPLF-----LYALDYQVSGQMGSFSRIGFNNSPINSAKGLYPTGSYVTAIGALQIDMDLlpk--sidTQRLKVGIGGELG 81  Helicobacter fe...
CBG39825      14 MSGS-----AGAMDFKPSGSLTSFNRIGFNNAPMNVKENLYPTESWGTFIVKAQVDADFlskeqkesGQSFTGSIGIFAG 88  Helicobacter mu...
WP_013022910  14 SSNT-----LQGMDAKISGAVETFNKIGFNNAPMNVKEGRYPTDTFGTLIARVQVDGDFltkeqkesGQSFTGGIGFLAG 88  Helicobacter mu...
Q7VIT2        14 FASS-----VNAFDYKVSGSAESFTKWGFNNQKLDIPNNQAPTESFTTLFAQLNLNADL--------GAGFKAGFGGALG 80  Helicobacter he...
BAM33060      14 VATS-----ASAFDYKVSGSAESFTKWGFNNQKLNQQSGAAPTESFTTIFSQLNLNLDL--------GAGFKAGFGGAIG 80  Helicobacter ci...
O25231        32 SSLFlsklqAYKFNMSIVGKVSSYTKFGFNNQRYQPSKDIYPTGSYTSLLGELNLSMGL--------YKGLRAEVGAMMA 103 Helicobacter py...
CBY83529      84 GMPYDGTRyDRYSKNLiQDAASTkitqgqyagktylevweqqknscggkwgcgsildggkyantgvpggiadprgIGYMF 163 Helicobacter fe...
O25230        90 GQAYDGTKyDRWAKDFtPPSYWDktscgtdsmslcmnat--------------------kmwqqsgpggvinprgIGWEY 149 Helicobacter py...
CBY83596      83 GLAFDSTK-TLIDQSKpNAGFQP----------------------------------------------------ANWYY 109 Helicobacter fe...
O25000        87 SLAYDSTK-FLMDEANpKAGFQP----------------------------------------------------ANWYY 113 Helicobacter py...
CBY83388      82 GLAYDSTK-TLVDQSGdNSEFQP----------------------------------------------------ANWYY 108 Helicobacter fe...
CBG39825      89 GLIYDNSR------------------------------------------------------------------------ 96  Helicobacter mu...
WP_013022910  89 GIIYDDTR------------------------------------------------------------------------ 96  Helicobacter mu...
Q7VIT2        81 GLAFDSTR----NDPIlDGVGSP----------------------------------------------------VITSY 104 Helicobacter he...
BAM33060      81 GLAFDSTDgKDPNQP-----FSA----------------------------------------------------VRNAY 103 Helicobacter ci...
O25231       104 ALPYDSTA-YQGNNIPnGQPGSRtdpf---------------------------------------------gagIFWQY 137 Helicobacter py...
CBY83529     164 MGEWNGLFPNYYPA--YAYSPGQSRPYE-----VYKANIQYKS----------DKVWMILGRYDTtQVediDWFYQLTQG 226 Helicobacter fe...
O25230       150 MGEWNGLFPNYYPA--NAYLPGGSRRYQ-----VYKANLTYDS----------DRVHMVMGRFDItEQeqmDWIYQLFQG 212 Helicobacter py...
CBY83596     110 IGRWQGYLMNAPWHrsLYGNSVNTRDYI-----LYSAYMSYSYk---------DIAGCQAGRYRS-HA---LFLSGYNQG 171 Helicobacter fe...
O25000       114 MGRWEGYLMQHSQNwtREQKAQNARPYV-----LYNLYLDYQYk---------DIFGIKLGRYPS-KA---LFLSGFNQG 175 Helicobacter py...
CBY83388     109 MGRWEGYLMNAPWRhsRYEDSVHAKNYI-----LYNAYLDYSYk---------DIFGIKLGRYVSkEA---LFLRGFNQG 171 Helicobacter fe...
CBG39825      97 --RWGNADFDKNFNl-KSGDSVVGAWYViananIYNLYGRYEIrkpnadgtadHVFSIKGGRYES-SA---EFMYAYTQG 169 Helicobacter mu...
WP_013022910  97 --RWGNVDFERNFHv-KSGDSIAGTNYIitngvLYNLYLQYQIqrpnadgtaeHIFTIKGGRYKS-TA---MFMSGFNQG 169 Helicobacter mu...
Q7VIT2       105 FG--------------TAWDKAKVQNYM-----VQNAFLEYSYs---------DNVYFKAGRYQSgKVg--EWFSGYNQG 154 Helicobacter he...
BAM33060     104 YGvs----------wdRNNNNGKIQNYM-----FQNAFVEYDN----------NTFYVKAGRYESgKVg--EWFSGYNQG 156 Helicobacter ci...
O25231       138 IGWYAGHSGLQ---------VQKPRLAM-----VHNAFLSYNYkk------dkFSFGVKGGRYDAeEY---DWFTSYTQG 194 Helicobacter py...
CBY83529     227 FYGLFKLHsKVKLQVFSSWGRGIADGQWMFPIYREKP----------WGE--HKIGLIYQVnKHFSIHPHVWFSPQVFTA 294 Helicobacter fe...
O25230       213 FYGTFKLTkNMKFLLFSGWGRGIADGQWLFPIYREKP----------WGV--HKAGIIYRPtKNLMIHPYVYLIPMVGTL 280 Helicobacter py...
CBY83596     172 FECFVQKG-GWHLEWFSTYGRGRASLQYIRDFYAPVQyryangartnYGM--HAIDLRWHQ-KSWDVRAFLWFYPKNFAA 247 Helicobacter fe...
O25000       176 FEVFYRWK-KFRIEWFSTFGRALANEQSIRDFYAPVNykq----kinYGM--HNLNLIYEN-KYIRVAPFIWFYPKNFNA 247 Helicobacter py...
CBY83388     172 FEAFVQFK-HLKLVWFSTYGRGLANIQFIRDFYAPVSyefpdgrrtnYGM--HALSLAWNS-KHFTVMPFLWFYPKNFNA 247 Helicobacter fe...
CBG39825     170 FELDYKYK-GLNLWWYSSFGRAFAEGSWMYPWYNPKQmnn-----vnYGI--HILQLSYTFkSGFHIQPYVYISPDFYVA 241 Helicobacter mu...
WP_013022910 170 FELDYRYK-GLELWWFSSFGRGFAYSEWIYDFYARKKmnn-----tnYGI--HVLKASYSFnSGFYISPFVYFSPDFYVA 241 Helicobacter mu...
Q7VIT2       155 AEGYLQAG-SVKLWGFLSNRRAFAYDQWFNDFYRVHGiygg---gatRNT--YALGLNLTF-GGLTLSGFSYYTPGIVTA 227 Helicobacter he...
BAM33060     157 AEAALNIS-ALKVWGFLSNRRAFAYDQWFNDFYRVHGkynd--siatRNT--YAAGLDLNF-GGLTIGAFSYFTPGIYTA 230 Helicobacter ci...
O25231       195 VEGFVKYK-DTRFRVMYSDARASASSDWFWYFgry----------ytSGKalMVADLKYEK-DNLKINPYFYAIFQRMYA 262 Helicobacter py...
CBY83529     295 PEVKFHYDTNPEFAGSGFRSQTTFYAMYVYQWKndyvpgighvgryglaryntwdtWgLYSGTcnvvnraqtgscgWDGY 374 Helicobacter fe...
O25230       281 PGAKIEYDTNPEFSGRGIRNRTTFYALYDYRWNnaeygryap------aryntwdpF-LDNGK-------------WRGL 340 Helicobacter py...
CBY83596     248 PGGQISYDTQGKLGN--WRIQTHFYWWLPIYNR-----------------------AlSHTYW-------------RSSL 289 Helicobacter fe...
O25000       248 PGFEITHDTKSYWESL-WRIQTTFYAWFPLYSD-----------------------YlSKDYY-------------RASL 290 Helicobacter py...
CBY83388     248 PGLQA----NAIFTPGKWKIQTDVFAWFPIYSA-----------------------TlAKTYY-------------RGNL 287 Helicobacter fe...
CBG39825     242 PILKLIYDSNPNFNKQGVRSKTTVNFMYVHHTP-----------------------AaAKQWR-------------YLAI 285 Helicobacter mu...
WP_013022910 242 PIIEAKYDSNPGFNREGVRSVTRVIFMSSFNTP-----------------------AaSKQWA-------------YQFL 285 Helicobacter mu...
Q7VIT2       228 PGASITFDTNPNKESQGFRSITKLRFLAPIADIsqrina------------------------------------krwge 271 Helicobacter he...
BAM33060     231 PGANVTFQSNPSFEGQGFNATTKIRFLAPIADDriaftqgs--------------------------------pnrdwge 278 Helicobacter ci...
O25231       263 PGINITYDTNPNFNNKGFRFVGTFVGFFPIFATpanqn---------------------------------diilfQQVP 309 Helicobacter py...
CBY83529     375 QGPGGATLLFKQRFDINNHNTSFGIYLNIGNPNPNIGTYGN----PVAidgVEQWTGSIYglgFASINNITAADAVTVYW 450 Helicobacter fe...
O25230       341 QGPGGATLLLRHHIDINNYFVVGGAYLNIGNPNMNLGTWGN----PVAvdgIEQWVGSIYslgFAGIDNITDADAFTEYV 416 Helicobacter py...
CBY83596     290 INHISASLLMQQNFFIRKHHFGWSVYKNFGNANAQVARFGT----PIK---YDTKDNTPY---EGRLDNLYNSNALTLVA 359 Helicobacter fe...
O25000       291 IGKKSASLFVFQRVHFRSYRFGWSVYKNFGNGNAQLGWNGS----PVDp-fYDTKDDTPY---EDAYSNFYNANSITINA 362 Helicobacter py...
CBY83388     288 VGKNTATLLVRQRFYIHDYYFGWGVYKNFGNANAQLGWNGS----PVS---FDTTDDTPY---EDAYTNLYDANALTAHA 357 Helicobacter fe...
CBG39825     286 AGHDAQTLNFTEQVDINNYYIAAGGYFNFGNANAQLGTYGNpw-iP-----WNYWSSTVYq--MGGMTAALTKNAKSGYI 357 Helicobacter mu...
WP_013022910 286 TGKEGHTLAILQQVDINNYYIGAGWYQNFGNGNAQIGTYGNgaigP-----WDFWTNTVYn--MSAVSNAVTKDAKTGYI 358 Helicobacter mu...
Q7VIT2       272 IDKHSYTLYLEQRFEVNLFNFGAGYYQNFGNANELIGRWGN----PIS---IDIWTGSAYd-iGQSLNDIIGRNAITGFG 343 Helicobacter he...
BAM33060     279 IGKYSYTLYIDQRFDVDKLFFGVGYYQNFGNANELIGRWGN----PIG---IDIWTAGAYd-iGNALNDIIGRNAITGFG 350 Helicobacter ci...
O25231       310 LGKSGQTYFFRTRFYYNKWQFGGSVYKNIGNANGDIGIYGD----PLG---YNIWTNSIY---DAEINNIVGADVINGFL 379 Helicobacter py...
CBY83529     451 KGGGVY--GNFDWELAERFTHAPRTTAQALALYLNYQFGKH-VKAGIKLEWFYAGINAGYNPGvgflssygqpfnmTTGV 527 Helicobacter fe...
O25230       417 KGGGKH--GKFSWSVYQRFTTAPRALEYGIGMYLDYQFSKH-VKAGLKLVWLEFQIRAGYNPGtgflgpngqplnlNTGL 493 Helicobacter py...
CBY83596     360 RGGGTY--AKFSWELLGRLTYSPRANEESLGLTCFYNMNKH-VRMMLRFNYYEVSTHRGYKVG-------------DFGA 423 Helicobacter fe...
O25000       363 FIGKSV--KNLLVQLYGKLTYSPRADSQSLGVTFKYNLKKH-IYLMLMFNGYQITMHKGYKVGf------------FTSG 427 Helicobacter py...
CBY83388     358 LIGGKF--KNFSWFLLGKITTGPRAYAQSLGLTCKYDW-KH-LHLMLRINGYQISMHRGYKVA-------------YFDA 420 Helicobacter fe...
CBG39825     358 YVGGSHlgGKLEWRILGRITRSPFENEASIPFNLYYTVNKY-FKMWFKLEWQTATLHKGYVIA---------------LI 421 Helicobacter mu...
WP_013022910 359 YGGGQH--GNFKWDILGRLTYSIRADEKAIPLNLYYTFNKH-FRIWFKLEWQRVTTHAGFVF------------------ 417 Helicobacter mu...
Q7VIT2       344 YIGANY--SSFDWKILGRGTNSPRSAEQSVAFILNYQIRED-IAVGGKLEWFSDTTKKGYSPL--------------GGS 406 Helicobacter he...
BAM33060     351 YLGANY--GSFDWKFIGRGTNSPRSAEQSVALLLNYRIRED-IAIGGKLEWFSDTTKAGYKSIv------------WGDA 415 Helicobacter ci...
O25231       380 YVGSQY--RGFSWKILGRWTDSPRADERSLALFLSYFSNKYnIRMDLKLEYYGNITKKGYCIG-------------YCGM 444 Helicobacter py...
CBY83529     528 FSSDSFaqnyaNVGGVGKTVWQDRSHLMTHISYSF 562 Helicobacter felis ATCC 49179
O25230       494 FESSAFaqgpqNMGGIAKSITQDRSHLMTHISYSF 528 Helicobacter pylori
CBY83596     424 LNLSFA------------PTTQDRSYMMTSIRYQl 446 Helicobacter felis ATCC 49179
O25000       428 YNPDFA------------QTIQNRSYLMSSMSYRF 450 Helicobacter pylori
CBY83388     421 PNQKFA------------PSTQDRSYMMTSLSYDF 443 Helicobacter felis ATCC 49179
CBG39825     422 PNNPGSyylpgSPFKATKNVTQDRSNFMFSFTYSF 456 Helicobacter mustelae 12198
WP_013022910 418 -TTSSTldidaSPFRIKKSITQDRSQAMIILTYGF 451 Helicobacter mustelae
Q7VIT2       407 YQSQNN-----GGTMLTQNRKDDRSHAFFYIRHIF 436 Helicobacter hepaticus
BAM33060     416 KQSEDG-----GGKSDTKKRTDDRSHAFFYIRHTF 445 Helicobacter cinaedi CCUG 18818 = ATCC BAA-847
O25231       445 YVPVDPng--pGTQPLTHNVYSDRSHIMFNIAYGF 477 Helicobacter pylori
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