Conserved Protein Domain Family
L_ocin_972_ABC

?
TIGR03608: L_ocin_972_ABC 
putative bacteriocin export ABC transporter, lactococcin 972 group
A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Unknown substrate]
Statistics
?
PSSM-Id: 188353
Aligned: 16 rows
Threshold Bit Score: 269.1
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WP_000173357   6 VKHVQKIYKTRfqgnqvEALKDIHFTVEKGDYVAIMGESGSGKSTLLNILAMLDKPSRGQVYLNGTDTATIKNSQASSFR 85  Streptococcus p...
WP_011460000  10 LINISKSYGEH------RVLNNLSMTVGEGEMVAIMGKSGSGKTTILNIMGLLEKPDGGVVKLFGEKSPRIGSAKAYKFL 83  Desulfitobacter...
WP_000571330   4 LKNITKTIGGK------VILDNLSLRIDQGDLVAIVGKSGSGKSTLLNLLGLIDGDYSGRYEIFGQTNLAVNSAKSQTII 77  Streptococcus p...
WP_003450114   6 ISNLNKKYFDK------VIFKDFSLSIKKGEMIAISGRSGCGKSTLLNMIGLIEKFDSGEIIIDGVKNIKINSKLANKFL 79  Clostridium per...
WP_010896462   8 LTDISKSFHSE------TVLRDFNLTIDRGEMIAITGPSGSGKTTILNIIGLLEKEDRGTVRLFGKNKPAYHSKQALQFR 81  Bacillus halodu...
KGI39080       4 MENITKKFGDK------IILNNFSLDIQDGELLAVTGASGSGKSTILNIIGLLEGFDSGKLILDGDENIKINSSKSNKIL 77  Clostridium tetani
WP_031905890   4 LKDLTIQKGNI------HILKKLNLKFQCGKSYALIGKSGCGKSTLLNTIAGLEKTGKQYVYFNGQL-----EQFKSNFY 72  Staphylococcus ...
WP_010905030   4 IEELTKSYKGH------IIFDKLNLRIPEGKMTAIYGTSGAGKSTLLNIIGLIEDYDDGKYYFNGQFAPPFNSSLALKMR 77  Lactococcus lactis
WP_000593103   4 LENVFVKKGNK------NILDGCNFNFEKGKSYALVGESGAGKSTLLNIIAGFEDVSQGSIYIEDKL-----LKKKVDFY 72  Staphylococcus ...
WP_009892262   4 LINISKKFKDK------SIIDKFNLEISKGEFVAITGNSGSGKTTLLNIMGLLEKPNSGDIII--NNIKNPNSKQIRILQ 75  [Clostridium] d...
WP_000173357  86 REKLGFVFQDFNLLDTLSVKDNILLPLVLSRRPITEMMKKLVVTAENLGINQLQEKYPYEISGGQKQRVAVARAIITEPE 165 Streptococcus p...
WP_011460000  84 RTRLAYLFQNGALIDDETVDYNLEVPLLYVPKTKREKQEMKTTVLKKMGLSISLKQKIYELSGGEQQRVAIARILLKSCD 163 Desulfitobacter...
WP_000571330  78 REHISYLFQNFALIDDETVEYNLMLALKYVKLPKKDKLKKVEEILERVGLSATLHQRVSELSGGEQQRIAVARAILKPSQ 157 Streptococcus p...
WP_003450114  80 REKISYLFQNFALVDEETVEENLRLAIKHTIKNTKKIEEEIIRCLKFVGLEGCQKNYIYELSGGEQQRVAIARLMLKPSE 159 Clostridium per...
WP_010896462  82 KSKIAYLFQNFALMDDETVSKNLDVPLELINGSRTVKQQKKKEVLEKVGLFNKLNKKVHSLSGGEQQRVAIARLLLRPCD 161 Bacillus halodu...
KGI39080      78 REKIGYLFQNFALVDEETVYYNLHLALKYVKKNKKEKDELIKNVLKQMNLEGYEKRKIFELSGGEQQRVSIARLLLKPSK 157 Clostridium tetani
WP_031905890  73 RDKLGYLFQNYGLIDNLTVNENLDIGLAYKKISKKEKEQLKIRYIEQFGLSNSLKRKVHTLSGGEQQRVALIRMMLKDPI 152 Staphylococcus ...
WP_010905030  78 RNKISYLFQNFALLEDETIEKNLEIALIYSRISKKEKRKKMKKLLLQVGINHRLNTKVYSLSGGEKQRVAIARALLKESQ 157 Lactococcus lactis
WP_000593103  73 RYTLGYLFQNFALLENQTISQNLDLALKFKK-NKKDNMNLKKEVLKKVGLDLDIKRIVSSLSGGEQQRVALARLILKDPK 151 Staphylococcus ...
WP_009892262  76 RDFYGYLFQNYALIENENVENNLKIALKYQKNI--NHNEKINYALESVGLRKYNKKKIYELSGGEQQRVALARVILKECE 153 [Clostridium] d...
WP_000173357 166 ILLADEPTGALDSKSSAALLDVFDEINERGQTILMVTHSTAAASRAKRVLFI 217 Streptococcus pneumoniae
WP_011460000 164 LIFADEPTGSLDSDNRNEIMRILKDLNEAGKTIIIVTHDQYVAEACDRTIKL 215 Desulfitobacterium hafniense
WP_000571330 158 LILADEPTGSLDPENRDLVLKFLLEMNREGKTVIIVTHDAYVAQQCHRVIEL 209 Streptococcus pneumoniae
WP_003450114 160 IILADEPTGSLDEENRDIIISLLKELNESGKTIIIVTHDNYVAKQADRIIFL 211 Clostridium perfringens
WP_010896462 162 LLLADEPTGSLDMANRNVILDLLCQLNKEGMTIVIVTHDPEVADRCDRVITL 213 Bacillus halodurans
KGI39080     158 IILADEPTGSLDAKNRDLVLYYLNKLNKEGKTVIVVTHDMEVAKKCHRTISL 209 Clostridium tetani
WP_031905890 153 VMLADEPTGALDPKTGQMIIQSLFDLVDENKVLILATHDMAIANQCDEIIDL 204 Staphylococcus aureus
WP_010905030 158 LILADEPTGSLDTENRNEVIALLRQEVDKGKAVVIVTHDSYLKEVSDLVIEI 209 Lactococcus lactis
WP_000593103 152 IILADEPTGSLDTKNGKIVIDLLLKLLDENKTMIVVTHDLELAKRFDVIVNI 203 Staphylococcus aureus
WP_009892262 154 VIFADEPTGNLDKKNRDIVFDILKNLNKNGKTIVFVTHDLELSEQADRVIKL 205 [Clostridium] difficile
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap