Conserved Protein Domain Family
7tmA_GPR161

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cd15214: 7tmA_GPR161 
orphan G protein-coupled receptor 161, member of the class A family of seven-transmembrane G protein-coupled receptors
GPR161, an orphan GPCR, is a negative regulator of Sonic hedgehog (Shh) signaling, which promotes the processing of zinc finger protein GLI3 into its transcriptional repressor form (GLI3R) during neural tube development. In the absence of Shh, this proteolytic processing is normally mediated by cAMP-dependent protein kinase A (PKA). GPR161 is recruited to primary cilia by a mechanism depends on TULP3 (tubby-related protein 3) and the intraflagellar complex A (IFT-A). Moreover, Gpr161 knockout mice show phenotypes observed in Tulp3/IFT-A mutants, and cause increased Shh signaling in the neural tube. Taken together, GPR161 negatively regulates the PKA-dependent GLI3 processing in the absence of Shh signal by coupling to G(s) protein, which causes activation of adenylate cyclase, elevated cAMP levels, and activation of PKA. Conversely, in the presence of Shh, GPR161 is removed from the cilia by internalization into the endosomal recycling compartment, leading to downregulation of its activity and thereby allowing Shh signaling to proceed. In addition, GPR161 is over-expressed in triple-negative breast cancer (lacking estrogen receptor, progesterone receptor, and human epidermal growth factor receptor 2 (HER2) expression) and correlates with poor prognosis. Mutations of GPR161 have also been implicated as a novel cause for pituitary stalk interruption syndrome (PSIS), a rare congenital disease of the pituitary gland. GPR161 is a member of the class A family of GPCRs, which contains receptors for hormones, neurotransmitters, sensory stimuli, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.
Statistics
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PSSM-Id: 320342
Aligned: 4 rows
Threshold Bit Score: 422.426
Created: 9-Jan-2014
Updated: 17-Oct-2022
Structure
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Aligned Rows:
  next features
Feature 1:putative ligand binding pocket [chemical binding site]
Evidence:
  • Comment:based on the structures of some class A family members with bound ligands (peptides or chemicals), agonists, or antagonists
  • Comment:Small-molecule chemical ligands tend to bind deeper within the receptor core, compared to a peptide ligand neurotensin, which binds towards the extracellular surface of its receptor.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                               #  ##           ###### ##
Q8N6U8        29 TQFIAIIVITIFVCLGNLVIVVTLYKKSYlltlSNKFVFSLTLSNFLLSVLVLPFVVTSSIrrewifgvvWCNFSALLYL 108 human
XP_416594     27 TEAIAIIVIAVFICVGNLIIVVTLYRKSYlltlSNKFVFSLTLSNFLLSVLVLPFVVTSSIrrewifgvvWCNFSALLYM 106 chicken
Q90X46        25 LESVSIIIIAILACLGNLVIVVTLYKKPYlltpSNKFVFSLTSSNLLLSVLMLPFVVASSVrrdwmfgvvWCNFTALLHL 104 zebrafish
NP_001123848  24 AESIAIIIIDILICLGNLVIVVTLYKKSYllslSNKFVFSLTFSNLLLSMLVLPFVVVSSIlrewifgvvWCNFSALLYM 103 western clawed ...
Feature 1          #                                            # #####                      #  #
Q8N6U8       109 LISSASMLTLGVIAIDRYYAVLYPmvypmkitgNRAVMALVYIWLHSLIGCLPPLFGWSsvefdefkwmcvaaWHREPGY 188 human
XP_416594    107 LISSASMLTLGLIAIDRYYAVLYPmvypmkitgNRAVVALVYVWLHSLIGCLPPLFGWSslefdqfkwmcvaaWHKEAGY 186 chicken
Q90X46       105 LVSSSSMLTLGAIAIDRYYAVLYPmiypmkitgNRAVLAIVYIWLHSLVGCLPPLFGWSsfefdrfkwtctvsWHKEISY 184 zebrafish
NP_001123848 104 LISSASMLTLGIIAIDRYYAVLYPmvypmkitgNRAVLALVYVWLHSLIGCLPPLFGWStlefdhfkwmcvaaWHKEAGY 183 western clawed ...
Feature 1        ## ### ##                                                                       
Q8N6U8       189 TAFWQIWCALFPFLVMLVCYGFIFRVARvkarkvhcgtvviveedaqrtgrknsststsssgsrrnafqgvvysANQCKA 268 human
XP_416594    187 TAFWQVWCALLPFVVMMICYGFIFRVARikarkihcgsvviveedsqrngrknsststsssgsrrnafqgvvysANQCKA 266 chicken
Q90X46       185 TAFWVTWCCLLPLVAMLVCYGVIFRVARikarkvycgsvvvsqeesssqn--ngrknsntstsssgsrksliysGSQCKA 262 zebrafish
NP_001123848 184 TAFWQVWCALLPFIVMMICYGFIFRVARikarkihcgtviivqeasqkngrknsststsssgsrkngfssivysANQCKA 263 western clawed ...
Feature 1                      #  ## ##  #        ## ###  #  ##                     
Q8N6U8       269 LITILVVLGAFMVTWGPYMVVIASEAlwgkssvSPSLETWATWLSFASAVCHPLIYGLWNKTVRKEL 335 human
XP_416594    267 FITILVVIGAFVITWGPYMVVITSEAlwgknsiSPALETLATWLSFSSAICHPLIYGLWNKTVRKEL 333 chicken
Q90X46       263 FITILVVLGTFLTTWGPYVVVISTEAllgknsvSPQVETLVSWLSFTSAVCHPLIYGLWNKTVRKEL 329 zebrafish
NP_001123848 264 LITILVVIGAFVLTWGPYMIVISTEAlkgknsvSPVLETLATWLSFTSAICHPLIYGLWNKTVRKEL 330 western clawed frog

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