Conserved Protein Domain Family
RHS_core

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NF041261: RHS_core 
RHS element core protein
Statistics
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PSSM-Id: 469161
Aligned: 4 rows
Threshold Bit Score: -1
Created: 24-Apr-2023
Updated: 4-May-2023
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P16919             1 MSGKPAARQGDMTQYGGPIVQGSAGVRIGAPTGVACSVCPGGM---TSGNPVNPLLGAKVLPGETDLALPGPLPFILSRT 77   Escherichi...
1_ncbifamImport    1 MSGKPAARQGDMTRKGLDIVQGSAGVLIGAPTGVACSVCPKKKdspNYGNPVNPVLGAKVLPGETDIALPGPLPFILSRA 80  
P16918             1 MSGKPAARQGDMTQYGGSIVQGSAGVRIGAPTGVACSVCPGGV---TSGHPVNPLLGAKVLPGETDIALPGPLPFILSRT 77   Escherichi...
2_ncbifamImport    1 MSGKPAARQGDMTQYGGPIVQGSAGVRIGAPTGVACSVCPGGM---TSGNPVNPLLGAKVLPGETDLALPGPLPFILSRT 77  
P16919            78 YSSYRTKTPAPVGVFGPGWKAPSDIRLQLRDDGLILNDNGGRSIHFEPLLPGEAVYSRSESMWLVRGGKAAQPDGHTLAR 157  Escherichi...
1_ncbifamImport   81 YSSYRTRTPAPVGVFGPGWKAPFDIRLQIRDEGLILNDSGGRSIHFEPLFPGEISYSRSESLWLARGGVAAQHSSQPLSA 160 
P16918            78 YSSYRTKTPAPVGSLGPGWKMPADIRLQLRDNTLILSDNGGRSLYFEHLFPGEDGYSRSESLWLVRGGVAKLDEGHRLAA 157  Escherichi...
2_ncbifamImport   78 YSSYRTRTPAPVGIFGPGWKAPSDIRLQLRDDALVLNDNGGRSIHFEPLLPGEAVYSRSESMWLVRGGKAAQPDGHTLAR 157 
P16919           158 LWGALPPDIRLSPHLYLATNSAQGPWWILGWSERVPGAEDVLPaPLPP-YRVLTGMADRFGRTLTYRREAAGDLAGEITG 236  Escherichi...
1_ncbifamImport  161 LWQVLPEDVRLSPHVYLATNSLQGPWWILSWPERVPGADEVLP-PEPPaYRVLTGVVDGFGRTLAFHRAAEGDVAGAVTG 239 
P16918           158 LWQALPEELRLSPHRYLATNSPQGPWWLLGWCERVPEADEVLPaPLPP-YRVLTGLVDRFGRTQTFHREAAGEFSGEITG 236  Escherichi...
2_ncbifamImport  158 LWGALPPDIRLSPHLYLATNSAQGPWWILGWSERVPGAEDVLPaPLPP-YRVLTGMADRFGRTLTYRREAAGDLAGEITG 236 
P16919           237 VTDGAGREFRLVLTTQAQRAEEAR---TSSLSSSDSSRPLSAS-AFPDTLPG-TEYGPDRGIRLSAVWLMHDPAYPESLP 311  Escherichi...
1_ncbifamImport  240 VTDGAGRRFHLVLNTQAQRAEVFRkqrATSLSSPAGPRSASSSlVFPDTLPAgTGYGTDNGIRLEAVWLTHDPAYPDEQP 319 
P16918           237 VTDGAGRHFRLVLTTQAQRAEEARqqaISGGTEPS---------AFPDTLPGyTEYGRDNGIRLSAVWLTHDPEYPENLP 307  Escherichi...
2_ncbifamImport  237 VTDGAGREFRLVLTTQAQRAEEARkqhTASLSSPDTPRPLSDS-AFPDTLPG-TEYGPDRGIRLSAVWLTHDPAYPESLP 314 
P16919           312 AAPLVRYTYTEAGELLAVYDRSNTQVRAFTYDAQHPGRMVAHRYAGRPEMRYRYDDTGRVVEQLNPAGLSYRYLYEQDRI 391  Escherichi...
1_ncbifamImport  320 TAPLARYTYTAGGELRAVYDRSGTQVRGFTYDAEHAGRMVAHHYAGRPESCYRYDDTGRVTEQVNPEGLDYRFEYGESRV 399 
P16918           308 AAPLVRYGWTPRGELAAVYDRSNTQVRSFTYDDKYRGRMVAHRHTGRPEICYRYDSDGRVTEQLNPAGLSYTYQYEKDRI 387  Escherichi...
2_ncbifamImport  315 AAPLVRYTYTEAGELLAVYDRSNTQVRAFTYDAQHPGRMVGHRYAGRPEMRYRYDDAGRVVEQLNPAGLSYHYQYEQDRI 394 
P16919           392 TVTDSLNRREVLHTEGGAGLKRVVKKELADGSVTRSGYDAAGRLTAQTDAAGRRTEYGLNVVSGDITDITTPDGRETKFY 471  Escherichi...
1_ncbifamImport  400 IITDSLNRREVLYTEGEGGLKRVVKKEHADGSITRSEYDEAGRLKAQTDAAGRRTEYSLHMASGAVTAVTGPDGRTVRYG 479 
P16918           388 TITDSLNRREVLHTQGEGGLKRVVKKEHADGSVTQSQFDAVGRLRAQTDAAGRTTEYSPDVVTGLITRITTPDGRASAFY 467  Escherichi...
2_ncbifamImport  395 TVTDSLNRREVLHTEGGAGLKRVVKKELADGSVTHSGYDAAGRLTAQTDAAGRRTEYGLNVVSGDITDITTPDGRETKFY 474 
P16919           472 YNDGNQLTAVVSPDGLESRREYDEPGRLVSETSRSGETVRYRYDDAHSELPATTTDATGSTRQMTWSRYGQLLAFTDCSG 551  Escherichi...
1_ncbifamImport  480 YNSQRQVTSVTYPDGLRSSREYDEKGRLTAETSRSGETTRYSYDDPASELPTGIQDATGSTKQMAWSRYGQLLAFTDCSG 559 
P16918           468 YNHHSQLTSATGPDGLEIRREYDEWGRLIQETAPDGDITRYRYDNPHSDLPCATEDATGSRKTMTWSRYGQLLSFTDCSG 547  Escherichi...
2_ncbifamImport  475 YNDGNQLTAVVSPDGLESRRAYDEPGRLVSETSRCGDVIRYAYDNPHSELPATTTDATGSTRQMTWSRYGQLLAFTDCSG 554 
P16919           552 YQTRYEYDRFGQMTAVHREEGISLYRRYDNRGRLTSVKDAQGRETRYEYNAAGDLTAVITPDGNRSETQYDAWGKAVSTT 631  Escherichi...
1_ncbifamImport  560 YTTRYEYDRYGQQIAVHREEGISTYSSYNPRGQLVSQKDAQGRETRYEYSAAGDLTATISPDGKRSTIEYDKRGRPVSVT 639 
P16918           548 YVTRYDHDRFGQVTAVHREEGLSQYRAYDSRGQLIAVKDTQGHETRYEYNAAGDLTTVIAPDGSRNGTQYDAWGKAICTT 627  Escherichi...
2_ncbifamImport  555 YQTRYEYDRFGQMTAVHREEGISRYRRYDNRGRLTSVKDAQGHETRYEYNAAGDLTAVITPDGNRSETQYDAWGKAVSTT 634 
P16919           632 QGGLTRSMEYDAAGRVISLTNENGSHSVFSYDALDRLVQQGGFDGRTQRYHYDLTGKLTQSEDEGLVILWYYDESDRITH 711  Escherichi...
1_ncbifamImport  640 EGGLTRSMGYDAAGRITTLTNENGSQSTFLYDPVDRLTEQRGFDGRTQRYQYDLTGKLTQSEDEGLITLWHYDASDRITH 719 
P16918           628 QGGLTRSMEYDAAGRVIRLTSENGSHTTFRYDVLDRLIQETGFDGRTQRYHHDLTGKLIRSEDEGLVTHWHYDEADRLTH 707  Escherichi...
2_ncbifamImport  635 QGGLTRSMEYDLAGRITTLTNENGSRSEFTYDALDRLVQQRGFDGRTQRYHYDLTGKLTQSEDEGLVTLWHYDESDRLTH 714 
P16919           712 RTVNGEPAEQWQYDGHGWLTDISHLSEGHRVAVHYGYDDKGRLTGECQTVENPETGELLWQHETKHAYNEQGLANRVTPD 791  Escherichi...
1_ncbifamImport  720 RTVNGDPAEQWQYDEHGWLTTISHTSEGHRVAVHYGYDDKGRLTGERQTVENPETGEILWEHETGHAYSEQGLATRQEPD 799 
P16918           708 RTVNGETAERWQYDERGWLTDISHISEGHRVTVHYGYDSKGRLASEHLTVHHPQTNELLWQHETRHAYNAQGLANRCIPD 787  Escherichi...
2_ncbifamImport  715 RTVNGEPAEQWQYDEHGWLTEISHLSEGHQVAVHYGYDDKGRLAGERQTVHNPETGELLWQHETEHAYNEQGLANRVTPD 794 
P16919           792 SLPPVEWLTYGSGYLAGMKLGGTPLVEYTRDRLHRETVRSFGsMAGSNAAYELTSTYTPAGQLQSQHLNSLVYDRDYGWS 871  Escherichi...
1_ncbifamImport  800 GLPPVEWLTYGSGYLAGMKLGGTPLVEYTRDRLHRETARSFG-GAGSTAGYEQATAYTLTGQLQSRHLNLPQLDCDYTWN 878 
P16918           788 SLPAVEWLTYGSGWLSGMKLGDTPLVEYTRDRLHRETLRSFG-------RYELTTAYTPAGQLQSQHLNSLLSDRDYTWN 860  Escherichi...
2_ncbifamImport  795 SLPRVEWLTYGSGYLAGMKLGGTPLVEFTRDRLHRETVRSFG-----NNAYELTSTYTPAGHLQSQRLNSQVYDRDYDWN 869 
P16919           872 DNGDLVRISGPRQTREYGYSATGRLESVRTLAPDLDIRIPYATDPAGNRLPDPELHPDSTLTVWPDNRIAEDAHYVYRHD 951  Escherichi...
1_ncbifamImport  879 DNGQLVRISGPQECREYRYSGTGRLTGVHTTAANLDIDIPYATDPAGNRLPDPELHPDSTLTAWPDNRIAEDAHYVYRYD 958 
P16918           861 DNGELIRISSPRQTRSYSYSTTGRLTGVHTTAANLDIRIPYTTDPAGNRLPDPELHPDSALSMWPDNRIARDAHYLYRYD 940  Escherichi...
2_ncbifamImport  870 DNGDLVRISGPRQTWEYGYSATGRLESVRTLASDLDIRIPYATDPAGNRLPDPELHPDSTLTAWPDNRIAEDAHYVYRHD 949 
P16919           952 EYGRLTEKTDRIPAGVIRTDDERTHHYHYDSQHRLVFYTRIQHGEPLVESRYLYDPLGRRMAKRVWRRERDLTGWMSLSR 1031 Escherichi...
1_ncbifamImport  959 EYGRLAEKTDRIPEGVIRMHDERTHHYHYDSQHRLVFYTRIQHGEPQVESRYLYDPLGRRTGKRVWRRERDLTGWMSLSR 1038
P16918           941 RHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR 1020 Escherichi...
2_ncbifamImport  950 EYGRLTEKTDRIPAGVIRTDDERTHHYHYDSQHRLVFYTRIQHGEPLVESRYLYDPLGRRMAKRVWRRERDLTGWMSLSR 1029
P16919          1032 KPEVTWYGWDGDRLTTVQTDTTRIQTVYEPGSFTPLIRVETENGEREKAQRRSLAETLQQEgsengHGVVFPAELVRLLD 1111 Escherichi...
1_ncbifamImport 1039 KPEETWYGWDGDRLTTVQTQQTRIQTVYQPGSFTPLLRIETENGEHAKARHRILAEVLQED-----TGVTLPAELAVMLG 1113
P16918          1021 KPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSggedgGSVVFPPVLVQMLD 1100 Escherichi...
2_ncbifamImport 1030 KPEVTWYGWDGDRLTTVQTDTTRIQTVYEPGSFTPLIRVETENGEREKAQRRSLAETLQQEgsengHGVVFPAELVRLLD 1109
P16919          1112 RLEEEIRADRVSSESRAWLAQCGLTVEQLARQVEPEYTPARKAHLYHCDHRGLPLALISEDGNTAWSAEYDEWGNQLNEE 1191 Escherichi...
1_ncbifamImport 1114 RLERELRQGIVSEESQQWLAQCGLTAEQMAAQLEAEYIPERKLHLYHCDHRGLPLALISPEGETAWQGEYDEWGNLLGEE 1193
P16918          1101 RLESEILADRVSEESRRWLASCGLTVAQMQSQMDPVYTPARKIHLYHCDHRGLPLALISTEGTTAWYAEYDEWGNLLNEE 1180 Escherichi...
2_ncbifamImport 1110 RLEEEIRADRVSSESRAWLAQCGLTVEQLARQVEPEYTPARKVHFYHCDHRGLPLALISEDGNTAWRGEYDEWGNQLNEE 1189
P16919          1192 NPHHVYQPYRLPGQQHDEESGLYYNRHRYYDPLQGRYITQDPMGLKGGWNLYQYPLNPLQQIDPMGL 1258 Escherichia coli K-12
1_ncbifamImport 1194 SAQHLQQSLRLPGQQYDEESGLYYNRNRYYDPLQGRYITQDPIGLRGEWNLYKYPLNPVRFIDSLGL 1260
P16918          1181 NPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPISNIDPLGL 1247 Escherichia coli K-12
2_ncbifamImport 1190 NPYYLHQPYRLPGQQHDEESGLYYNRNRYYDPLQGRYITQDPIGLAGGWNLYNYPLNPIIRMDPLGL 1256
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