Conserved Protein Domain Family
COG3269

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COG3269: COG3269 (this model, PSSM-Id:225808 is obsolete and has been replaced by 442500)
Predicted RNA-binding protein, contains TRAM domain [General function prediction only]
Statistics
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PSSM-Id: 225808
Aligned: 20 rows
Threshold Bit Score: 65.4648
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
16120053  69 P-SERNSGPPTPPVTEGEVRDVTIETVGDQGDGIAKVErGYVVIIPGAQPGDEPTIEIDQVQENVAFASVVDTGP 142 Halobacterium sp. NRC-1
20089080 133 kkrkvsnvvvrdaIEEGGTYELRIDAVGSKGDGIAKID-KYTVFVPGAAKGDVVKVKIKKISGNLAFSEKV---- 202 Methanosarcina acetivora...
20094458   1 ------MEGKDKPVDVGDVYEVKIEDTGKRGDGVARVN-GFVIFVPEAEKGDKVLVKIVSVRDTYAIGRIVEI-- 66  Methanopyrus kandleri AV19
18313793   9 PpRGRRGPSWPKPVKEGDIVEVEIVEKSRRGDGVARVE-GFVVFVPGAEPGQRVKVQIEKVGGSYAIGKILS--- 79  Pyrobaculum aerophilum
20532124 132 pihtvkEFKEEEGIEEGKEYTVEISEVGSSGEGRASFR-GFTIFVPGTKKGETVKVKIKKIKNDVAIAEVVSRTS 205 Thermoplasma volcanium
20532137 132 pihsvrEAKDDETIEEGKEYVVEITEVGSSGEGRTNYK-GYTIFVPGAKRGETVKVRIKKVKNDVAIGEIIERSK 205 Thermoplasma acidophilum
16554462  68 StSTGASSEPQPPVEEGEIRYVEIEDIGKQGDGIARVErGYVIIVPDAEIGERVKVEVTEVKSNFAVGEIIDEEY 142 Halobacterium sp. NRC-1
15791077 187 elyvvgknhivaPIAEGDEHTVEIVDTGDEGDGIARIE-GYTLFVDDAAEGDTVDVTVTDLKPNYGFAERRDGA- 259 Halobacterium sp. NRC-1
16120310  60 pdsqRERTPSTPPVEEGDQRTVEIEDIGEQGDGITRVErGFVVIVPDTESGERVTIEITEVAETVAFADVVEREH 134 Halobacterium sp. NRC-1
10803616  69 P-SERNSGPPTPPVTEGEVRDVTIETVGDQGDGIAKVErGYVVIIPGAQPGDEPTIEIDQVQENVAFASVVDTGP 142 Halobacterium sp. NRC-1
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