Conserved Protein Domain Family
RfaF

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COG0859: RfaF (this model, PSSM-Id:223928 is obsolete and has been replaced by 440620)
ADP-heptose:LPS heptosyltransferase [Cell wall/membrane/envelope biogenesis]
Statistics
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PSSM-Id: 223928
Aligned: 70 rows
Threshold Bit Score: 128.258
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
15645896  81 KKTLCFIRLD-IIGDYILYRNFLPLFKKYFED----YETTFIGNATIKGIATHCdsQYIDKFIFLDNayWEKYlrigvng 155 Helicobacter pylori...
15832031   8 RRIAFSYYDY-KAYNFNIEKTDFVVIHIPDQIgdamAIFPVIRALELHKIKHLL--IVTSTINLEVF--NALK------- 75  Escherichia coli O1...
19704582  48 IKSILFLRYDgKIGDMVVNSLMFREIKKVYPN----IKIGVVARGAAMDIIKDN--PNIDKIYEYHK------------- 108 Fusobacterium nucle...
15645897  17 SQKVFVIRND-KLGDFILAIPALIALKHAFLEkgkeVYLGVVVPSYTTPIALEF--PFIDEVIIED-------------- 79  Helicobacter pylori...
15603009  32 PRSILFLRQDgKIGDYVVSSFVFREIKKFNPH----IKIGVICTKQNAYLFKQN--PYIDQLYYVKK------------- 92  Pasteurella multocida
15603159   1 MQKLLVVRND-KLGDFMLAWPAFAMLKQSNPS----LKLTALVPNYTADLARLC--PYLDDVIIDVG--KKAD------- 64  Pasteurella multocida
15640253   1 MKKLLVIRND-KIGDFMLAWPSFAMLKASLPD----CHITALVPKYTAALAELC--PWIDAVIIDPG--QQAD------- 64  Vibrio cholerae
15802463   8 RRIAFSYYDY-KAYNFNIEKTDFVVIHIPDQIgdamAIFPVIRALELHKIKHLL--IVTSTINLEVF--NALK------- 75  Escherichia coli O1...
16129924   8 RRIAFSYYDY-KAYNFNIEKTDFVVIHIPDQIgdamAIFPVIRALELHKIKHLL--IVTSTINLEVF--NALK------- 75  Escherichia coli K12
15612269  17 SQKVFVIRND-KLGDFILAIPALIALKHAFLEkgveVYLGVVVPSYTTPIALEF--PFIDEVIIED-------------- 79  Helicobacter pylori...
15645896 156 SRLSKLKELLFFLPKFmrkRYEDVSNLRKESYEICINSsmfYFSTKEDAIIKHliaENKVGVFCTHPIESsfrTDYRKRG 235 Helicobacter pylori...
15832031  76 --LEQTKLTLVTMTMQ---DHATLKEIKDLAKNITQQYgtpDLCIEAMRKKNL---KTMLFISQLKAKTNfqvVGLTMKC 147 Escherichia coli O1...
19704582 109 -DRKKIKDLALKIKEE---KYDLLIDFSEMLRVNQMMLi-nLCGARFNIGLN----RKEWKLFDLSIESD---KDFKWTE 176 Fusobacterium nucle...
15645897  80 ------NHLSATLKSK---PIDALIFLFSNFKNARLAFs-lRKSIPYILAPKT---KIYSWLYQKSVRQSrslCLKTEYE 146 Helicobacter pylori...
15603009  93 KSILDYIKCGLAIQKE---QYDLVIDPTIMIRNRDLLLl-rLINAKHYIGYQK----ANYGLFNINLEG---------QF 155 Pasteurella multocida
15603159  65 --KADQLKTLQAIKAV---KFDASINFFSDKYNALLVW---KAGIPFRLAPAT---KLIQFLYNHRVTQRrskSLKPEFE 133 Pasteurella multocida
15640253  65 --KAQHKQLVQTVKAQ---QFDASINLFSTMYNALLVW---KARIPYRLAPAT---KLAQIFYQHRIKQKrsqSAKPEYE 133 Vibrio cholerae
15802463  76 --LEQTKLTLVTMTMQ---DHATLKEIKDLAKNITQQYgtpDLCIEAMRKKNL---KTMLFISQLKAKTNfqvVGLTMKC 147 Escherichia coli O1...
16129924  76 --LEQTKLTLVTMTMQ---DHATLKEIKDLAKNITQQYgtpDLCIEGMRKKNL---KTMLFISQLKAKTNfqvVGITMNC 147 Escherichia coli K12
15612269  80 ------NHLATTLKNR---SIDALIFLFSNFKNAKLAFs-lRKSIPYILAPKT---KIYSWLYQKRVRQNrslCLKTEYE 146 Helicobacter pylori...
15645896 236 EIRKSFYTHLFYPKEVPQFlydsnqdFFQSFFKHFKGVDIGFVELELKLpiaf--eyeKFKNILKPPygVLNLGASDDSR 313 Helicobacter pylori...
15832031 148 YSPVCKNASRMDQKLRAPVpmtwafmMREAGFPAVRPIYELPLSEDVLDevreemrslGSYIALNLE--GSSQDRTFSLS 225 Escherichia coli O1...
19704582 177 HITNRYLAYLVKLGLKKENi-----dISYDIYLKDEKKYEFFFNEIKE----------NKKLILNPY--GASKHKSFTIE 239 Fusobacterium nucle...
15645897 147 YNLDLIHAFCKDHNLPNAQlkk--iaWKLKDKSKERSIIASKLNADVG----------LLWIGVHMH--SGGSSPVLPAS 212 Helicobacter pylori...
15603009 156 HFSELYKLALEKVNITVQD-------ISYDVPFDEQSAVEISEFLQKNQl--------EKYIAINFY--GAARIKKVNDD 218 Pasteurella multocida
15603159 134 YNLDLARAFLQKTHCPIVEptppyltFEQNAVQHQREMLSQTLGLALE----------KKWIFVHSG--SGGSATNLSLE 201 Pasteurella multocida
15640253 134 YNLDLVRAFLRDIGQPIIEpnapyltFPAEQLAAQRSKLAEQLDIGPD----------KAWLFVHAG--SGGSANNLSLE 201 Vibrio cholerae
15802463 148 YSPVCKNASRMDQKLRAPVpmtwafmMREAGFPAVRPIYELPLSEDVLDevreemrslGSYIALNLE--GSSQDRTFSLS 225 Escherichia coli O1...
16129924 148 FSPLCKNASSMDQKLRAPVpmtwafmMREAGFPAVRPIYELPLSEDVLDevreemrslGSYIAFNLE--GSSQERTFSLS 225 Escherichia coli K12
15612269 147 YNLDLIHAFCKDYDLPNAQlkk--iaWKLKDKSKERSIIASKLNANVD----------LLWIGVHMH--SGGSSPVLPAS 212 Helicobacter pylori...
15645896 314 VYKRFDEMIYFLNpdYQLVLCGNSk-KDEELANSILKRHKNAIs-LVNQTGLIEYLYLLKNASF--AMGNESSITHLSAC 389 Helicobacter pylori...
15832031 226 IAENLIEKIQSETdiPIVIVHGPKgeDKARV---LVDCYNnv-yrLSLSPSIKRSAAIIKDAYI--AITPDTSILHMASA 299 Escherichia coli O1...
19704582 240 TLENIITCLKDKD--IAIILVYFG--DKYKELEFLEKKYNNIYm-PQKIESILDTTILIKKSDY--VISPDTSIVHIASA 312 Fusobacterium nucle...
15645897 213 HFIKLIDCLHNNLscEIILICGPGe-RKATE--ELLKKIPfa-hlYDTSHSLVDLAK--LCANLsvYIGNASGPLHVNAL 286 Helicobacter pylori...
15603009 219 NIKKYLDYLTQVSggKKLVLLSYP--EVTEKLTQLSADYPHIF--VHPTTKIFHTIELIrHCDQ--LISTDTSTVHIASG 292 Pasteurella multocida
15603159 202 QYAQLILGLLSQFdcQIVLTAGPNesEKAHSLANLVNHHnv--vvYDKNAGLVDFARSLACADL--FIAGSTGPLHLSAA 277 Pasteurella multocida
15640253 202 QYCELVTGVMDEHk-QVVLTAGPGeeEKAAQLQSLLAEQGVlaalYAKNDGLVDFTRSLACAQL--FIAGSTGPLHIAAA 278 Vibrio cholerae
15802463 226 IAENLIEKIQSETdiPIVIVHGPKgeDKARV---LVDCYNnv-yrLSLSPSIKRSAAIIKDAYI--AITPDTSILHMASA 299 Escherichia coli O1...
16129924 226 IAENLIAKI----------------------------------------------------------------------- 234 Escherichia coli K12
15612269 213 HFIELIAILHEKLscEIILICGPGe-RKATE--ELLKEVPfa-hlYDTSHSLVDLAK--LCANLsvCIGNASGPLHVNAL 286 Helicobacter pylori...
15645896 390 LKIPYAFIVSSGLSSPrfhPyPKEVGPNIHMIYPRDFQKIISrssdwmfkamtMPHPPVDFVNPQDIISAIKRFAPHLL 468 Helicobacter pylori ...
15832031 300 YNTPVVAIYADYKT---------RWPAMADVSESVVVGQKID---------------NISLDEFAKALKSVLARI---- 350 Escherichia coli O15...
19704582 313 LNKKMITVYPPNGGKY---GvDHLVWAPKSEYSRVIFCKDKTg---------tYDEIDINTFNFDEIKEEILKLINNSD 379 Fusobacterium nuclea...
15645897 287 FDNQSIGFYPNELSAS---I--ARWRPFN--ERFLGITPPNG-------------SNDMGLIDIEKEGEKIVGFINYRK 345 Helicobacter pylori ...
15603009 293 FNKPIIGIYKEDPIAF-------THWQPKSQAETHILFYKEN----------------INELSPEQIDPAWLVR----- 343 Pasteurella multocida
15603159 278 LNIPTIGFYPSRRSAT---P--LRWQPINDPTKHLAFSPQTQd---------rEKQMDLSLIDIDQVLTQAIPFVKTMW 342 Pasteurella multocida
15640253 279 LDVPTVGFFPAKRSAT---P--LRWRPLNSQGKHIAFCPPPAdd--------kANQENMGRIDMKSVLTELAPWLRSVQ 344 Vibrio cholerae
15802463 300 YNTPVVAIYADYKT---------RWPAMADVSESVVXGQKID---------------NISLDEFAKALKSVLARI---- 350 Escherichia coli O15...
16129924     -------------------------------------------------------------------------------     Escherichia coli K12
15612269 287 FDNQSIGFYPNELTAS---I--ARWRPFN--EQFLGITPPNG-------------SNDMGLIDIQKESEKIMGFITKNL 345 Helicobacter pylori J99
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