1UCH,1XD3,2ETL,1CMX


Conserved Protein Domain Family
Peptidase_C12_UCH_L1_L3

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cd09616: Peptidase_C12_UCH_L1_L3 
Click on image for an interactive view with Cn3D
Cysteine peptidase C12 containing ubiquitin carboxyl-terminal hydrolase (UCH) families L1 and L3
This ubiquitin C-terminal hydrolase (UCH) family includes UCH-L1 and UCH-L3, the two members sharing around 53% sequence identity as well as conserved catalytic residues. Both enzymes hydrolyze carboxyl terminal esters and amides of ubiquitin (Ub). UCH-L1, in dimeric form, has additional enzymatic activity as a ubiquitin ligase. It is highly abundant in the brain, constituting up to 2% of total protein, and is expressed exclusively in neurons and testes. Abnormal expression of UCH-L1 has been shown to correlate with several forms of cancer, including several primary lung tumors, lung tumor cell lines, and colorectal cancers. Mutations in the UCH-L1 gene have been linked to susceptibility to and protection from Parkinson's disease (PD); dysfunction of the hydrolase activity can lead to an accumulation of alpha-synuclein, which is linked to Parkinson's disease (PD), while accumulation of neurofibrillary tangles is linked to Alzheimer's disease (AD). UCH-L3 hydrolyzes isopeptide bonds at the C-terminal glycine of either Ub or Nedd8, a ubiquitin-like protein. It can also interact with Lys48-linked Ub dimers to protect them from degradation while inhibiting its hydrolase activity at the same time. Unlike UCH-L1, neither dimerization nor ligase activity have been observed for UCH-L3. It has been shown that levels of Nedd8 and the apoptotic protein p53 and Bax are elevated in UCH-L3 knockout mice upon cryptorchid injury, possibly contributing to profound germ cell loss via apoptosis.
Statistics
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PSSM-Id: 187737
Aligned: 32 rows
Threshold Bit Score: 229.06
Created: 15-Dec-2010
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 4 residues -Click on image for an interactive view with Cn3D
Feature 1:catalytic site [active site]
Evidence:
  • Comment:Active site residues include a cysteine
  • Citation:PMID 9233788

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                         
1UCH_A          6 WLPLEANPEVTNQFLKQLGlh-pnWQFVDVYGMd-pELLSMVPRpvCAVLLLFPItekYEVFRTEEEEKiksq------g 77   human
1XD3_A          6 WLPLEANPEVTNQFLKQLGlh-pnWQFVDVYGMd-pELLSMVPRpvCAVLLLFPItekYEVFRTEEEEKiksq------g 77   human
EFP74106        3 WLPLESNPEVMNAWSSALGlstdqVSFTDVYGLd-aELLAMVPKpvYAVLMLFPIskeYEAARAAEHARivdqa---gga 78   Puccinia gram...
EFQ30601       15 FIPLEANPELMTSLLHKLGls-paLSVHDVYSLtdpDMLSFVPRpaLAVLLVFPVsaaYESHRLAEDSLleey-----kg 88   Glomerella gr...
EFR01438       18 LVPLENNPEVMSHLIHELGvs-pkLGFYDVYSVddpDLLAFIPRpvYGLIFICPRd-aYHRTRESMGTDsmpey----tg 91   Arthroderma g...
EFQ86957       16 FIPLENNPDVMTGLVHKLGls-dkLAFQDVFSIddpELLAFVPRpaHALLLVFPVsktYEQFRMQEDKDkaey-----eg 89   Pyrenophora t...
EFQ35979        9 FIPLESNPDVFNELIALLGas-psLQFQDIFTL---DDPAALPQkiLALVLVFPTt-sTFETRLTQEEAgakdwm--vdh 81   Glomerella gr...
EFQ25707       16 FIPLENNPDVFTSLVHDLGvs-psLGFFDVYSLdepALLDLVPRpaLALIFIAPAp-mYYQVRAADGTRiakedgvtyrg 93   Glomerella gr...
XP_003081381  759 WLPLEANPDVMNAFAHELGls-psLAFHDVYGFd-dDLLEFIPEpcVAVLMLFPLtprTESVAGVDAPAp---------- 826  Ostreococcus ...
1717868         2 WRPLENTPEVLEPYLQKIGvq--dASVFDLFSLe--EIPEYIPRpvHALLFVFPSsgtKTIYKGSRILPk---------- 67   fission yeast
Feature 1                    #     #                                                              
1UCH_A         78 qdVTSSVYFMKQTIsNACGTIGLIHAIANNKDkmhfesgSTLKKFLEESVsmsPEERARYLENYdaIRVTHETSAHegqt 157  human
1XD3_A         78 qdVTSSVYFMKQTIsNACGTIGLIHAIANNKDkmhfesgSTLKKFLEESVsmsPEERARYLENYdaIRVTHETSAHegqt 157  human
EFP74106       79 lkSDERLIFIKQTIsNACGTIGLLHALANNSEipi--teGPLTKFLEQCRaksPSERAQLLEDDcaIADVHADQAQsgqs 156  Puccinia gram...
EFQ30601       89 kgPREPVVWFRQTIrNACGLMGLLHAVANGPAreyiqkpSDLDTLIENALpldPVARAQLLEKTpaLATAHREAASqgat 168  Glomerella gr...
EFR01438       92 lgPDEPVLWFKQTInNTCGLMALIHCISNGEAreyipagSELDQLFKAAVdlpPTERAQLLYDSplLERAHRSAARrgds 171  Arthroderma g...
EFQ86957       90 hgPDEEVVWYKQTIgNACGLIGLLHSVSNGTArahirpdSNLAKLVDDAIplkPMERADLLYESqaLESAHRDAASggdt 169  Pyrenophora t...
EFQ35979       82 deEDEDAVWFKQTInNACGLYAILHALANGRAkdflrpaSLLDSLLSIAApmdPAQAAMVLEGSqeLEDAYASVATkrdt 161  Glomerella gr...
EFQ25707       94 agPGEPVTWFRQTIgNACGLYALIHAVGNGEArtlvtegSLLDGLLKEAEplrWEARADVLYKSeeLEEAHMKAARkgdt 173  Glomerella gr...
XP_003081381  827 -dAVSSVWFARQTVsNACGTMGVIHAALNAKDavv--pgSRLESLRAACEgsdPDARARVIENDdaLEAAHVCASTegqs 903  Ostreococcus ...
1717868        68 --DSDKVLWYPQTIpNACGTIGLLHAVSNGELrrkvnenDFIKSLIRTAEgssIEERAKLIEDSkeLEALHAAFAGpple 145  fission yeast
Feature 1                     #                        #                                          
1UCH_A        158 eap-sidekvDLHFIALVHvd----------gHLYELDGRkPFPINHGETSdet---llEDAIEVCKKFMERDp------ 217  human
1XD3_A        158 eap-sidekvDLHFIALVHvd----------gHLYELDGRkPFPINHGETSdet---llEDAIEVCKKFMERDp------ 217  human
EFP74106      157 kvp-ssdeevNLHFVCFVKkiaqpdrpeaepaRLVELDGRkAFPIDHGPIApsq--dllEAVVPVVKQFIQLSq------ 227  Puccinia gram...
EFQ30601      169 eap-easddvDLHYVCFVRgd---------dgTLWELDGRrKGPLNRGQLDagedvlseKALTWGPRKFLEREg------ 232  Glomerella gr...
EFR01438      172 tvp-apddkcGFHYICFVKgs---------dgHLWDLEGGvKGPIDRGFLNedqdglseKALDLGVRAFLKHEsdtgkgv 241  Arthroderma g...
EFQ86957      170 aap-aadsdvDLHYVCFIKse---------nnHLWELDGRrKGPLDRGELSptddvlseKALDLSVRSFLKREqea--gg 237  Pyrenophora t...
EFQ35979      162 papdsaeddvNYHYICYVKspd--------tgHLYELDGDrKGPVDRGIPDedekvdlgAKSLDIVRQFIAQGg------ 227  Glomerella gr...
EFQ25707      174 app-paeerpGYHFIAFVKgk---------dgHLWELEGGsDGPVDRGLLEegedmlseGALEKGVKKFLNYAd------ 237  Glomerella gr...
XP_003081381  904 avp-nadeviDLHFVALVErd----------gGVWELDGRkPAPVYHGATTgsg---llRDAVPVIRKYMEAAe------ 963  Ostreococcus ...
1717868       146 vegseedvetDLHFICFVKgksk------ddnHFYELDGRqEGPVQHSEIEsdl---lnAEVLSVIKNYIQSI------- 209  fission yeast
Feature 1                   
1UCH_A        218 DELRFNAIAL 227  human
1XD3_A        218 DELRFNAIAL 227  human
EFP74106      228 DNVNFNLIAL 237  Puccinia graminis f. sp. tritici CRL 75-36-700-3
EFQ30601      233 ADLRFSAVAL 242  Glomerella graminicola M1.001
EFR01438      242 DVSGFSIVAL 251  Arthroderma gypseum CBS 118893
EFQ86957      238 GEIRFSLITL 247  Pyrenophora teres f. teres 0-1
EFQ35979      228 HDIGFSLMAL 237  Glomerella graminicola M1.001
EFQ25707      238 GNLEFSIVAL 247  Glomerella graminicola M1.001
XP_003081381  964 GSIHFNAIAL 973  Ostreococcus tauri
1717868       210 DSPFFSLVAI 219  fission yeast

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