Conserved Protein Domain Family
7tmA_SREB1_GPR27

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cd15216: 7tmA_SREB1_GPR27 
super conserved receptor expressed in brain 1 (or GPR27), member of the class A family of seven-transmembrane G protein-coupled receptors
The SREB (super conserved receptor expressed in brain) subfamily consists of at least three members, named SREB1 (GPR27), SREB2 (GPR85), and SREB3 (GPR173). They are very highly conserved G protein-coupled receptors throughout vertebrate evolution, however no endogenous ligands have yet been identified. SREB2 is greatly expressed in brain regions involved in psychiatric disorders and cognition, such as the hippocampal dentate gyrus. Genetic studies in both humans and mice have shown that SREB2 influences brain size and negatively regulates hippocampal adult neurogenesis and neurogenesis-dependent cognitive function, all of which are suggesting a potential link between SREB2 and schizophrenia. All three SREB genes are highly expressed in differentiated hippocampal neural stem cells. Furthermore, all GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.
Statistics
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PSSM-Id: 320344
Aligned: 3 rows
Threshold Bit Score: 548.472
Created: 28-Mar-2014
Updated: 17-Oct-2022
Structure
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Aligned Rows:
  next features
Feature 1:putative ligand binding pocket [chemical binding site]
Evidence:
  • Comment:based on the structures of some class A family members with bound ligands (peptides or chemicals), agonists, or antagonists
  • Comment:Small-molecule chemical ligands tend to bind deeper within the receptor core, compared to a peptide ligand neurotensin, which binds towards the extracellular surface of its receptor.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                             #  ##               ####
Q9NS67     19 GLKLATLSLLLCVSLAGNVLFALLIVRERSlhraPYYLLLDLCLADGLRALACLPAVMLAARRaaaaaGAPPGalgCKLL 98  human
O54897     22 GLRLATLSLLLCVSLAGNVLFALLIVRERSlhraPYYLLLDLCLADGLRALACLPAVMLAARRaaaaaGTPPGalgCKLL 101 house mouse
Q9JJH3     20 GLRLATLSLLLCVSLAGNVLFALLIVRERSlhraPYYLLLDLCLADGLRALACLPAVMLAARRaaaaaGTPPGalgCKLL 99  Norway rat
Feature 1     ## ##  #                                             # #####                    
Q9NS67     99 AFLAALFCFHAAFLLLGVGVTRYLAIAhhrFYAERLagWPCAAMLVCAAWALALAAAFPPVLDgg-gDDEDAPCALEQRp 177 human
O54897    102 AFLAALFCFHAAFLLLGVGVTRYLAIAhhrFYAERLagWPCAAMLVCAAWALALAAAFPPVLDgggaDDEDAPCALEQRp 181 house mouse
Q9JJH3    100 AFLAALFCFHAAFLLLGVGVTRYLAIAhhrFYAERLagWPCAAMLVCAAWALALAAAFPPVLDgggaDDEDAPCALEQRp 179 Norway rat
Feature 1     #  ### ### ##                                                                   
Q9NS67    178 DGAPGALGFLLLLAVVVGATHLVYLRLLFFihdrRKMRPARLVPAVSHDWTFHGPGATGQAAANWTAGFGRGPTPPALVG 257 human
O54897    182 DGAPGALGFLLLLAAVVGATHLVYLRLLFFihdrRKMRPARLVPAVSHDWTFHGPGATGQAAANWTAGFGRGPTPPALVG 261 house mouse
Q9JJH3    180 DGAPGALGFLLLLAAVVGATHLVYLRLLFFihdrRKMRPARLVPAVSHDWTFHGPGATGQAAANWTAGFGRGPTPPALVG 259 Norway rat
Feature 1                                            #  ## ##  #        ## ###  #  ##         
Q9NS67    258 IRpagpgrgARRLLVLEEFKTEKRLCKMFYAVTLLFLLLWGPYVVASYLRVLvrpgavPQAYLTASVWLTFAQAGINPVV 337 human
O54897    262 IRpagpgrgARRLLVLEEFKTEKRLCKMFYAITLLFLLLWGPYVVASYLRVLvrpgavPQAYLTASVWLTFAQAGINPVV 341 house mouse
Q9JJH3    260 IRpagpgrgARRLLVLEEFKTEKRLCKMFYAITLLFLLLWGPYVVASYLRVLvrpgavPQAYLTASVWLTFAQAGINPVV 339 Norway rat
Feature 1                 
Q9NS67    338 CFLFNRELRDCF 349 human
O54897    342 CFLFNRELRDCF 353 house mouse
Q9JJH3    340 CFLFNRELRDCF 351 Norway rat

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