3NWN


Conserved Protein Domain Family
KISc_KIF9_like

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cd01375: KISc_KIF9_like 
Click on image for an interactive view with Cn3D
Kinesin motor domain, KIF9-like subgroup
Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.
Statistics
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PSSM-Id: 276826
Aligned: 5 rows
Threshold Bit Score: 574.913
Created: 5-Feb-2015
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
ATP bindingmicrotubule
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1:ATP binding site [chemical binding site]
Evidence:
  • Structure:3NWN, Homo sapiens Kif9 Motor Domain with bound ADP, contacts 4A
  • Comment:interaction site for Mg ADP, ATP hydrolysis drives motor function
  • Citation:PMID 9485302

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             #                                                                       
3NWN_A     25 KVHAFVRVKPtdd-fahEMIRYGDDkrSIDIhlkk---dirRGVVNNqqtdWSFKLDGVLHD-ASQDLVYETVAKDVVSQ 99  human
AAB88700    5 TIQIFARVKPsvrkqqqGIYSIDEDekLASSleivlprdlaDGFVNNkresYKFKFQRIFDQeAKQEIIFEIIAKPVAES 84  Norway rat
P46870      5 AVKVFVRTRPtat--sgSGLKLGPDgqSVSVnvpk---dlsAGPVNNqqeqFSFKFDGVLEN-VSQEAAYTTLAHEVVDS 78  Chlamydomonas rein...
CAA55326    5 AVKVFVRTRPtat--sgSGLKLGPDgqSVSVnvpk---dlsAGPVNNqqeqFSFKFDGVLEN-VSQEAAYTTLAHEVVDS 78  Chlamydomonas rein...
Q9WV04      6 KVQAFVRVRPtdd-fahEMIKYGEDnkSIDIhlkk---dtrRGVVNNqqtdWSFKLDGVLHN-ASQDLVYETVAKDAVSQ 80  house mouse
Feature 1                 #  # ####                                                           
3NWN_A    100 ALDGYNGTIMCYGQTGAGKTYTMMGATeNYKHRGILPRALQQVFRMIEerpthaITVRVSYLEIYNESLFDLLstlpyv- 178 human
AAB88700   85 TLAGYNGTIFAYGQTGSGKTFTITGGAeRYSDRGIIPRTLSYIFEQLQkdsskiYTTHISYLEIYNECGYDLLdprheas 164 Norway rat
P46870     79 LMAGYHGTIFAYGQTGAGKTFTMSGGGtAYAHRGLIPRAIHHVFREVDmradkmYRVHVSYLEIYNEQLYDLLgdtp--- 155 Chlamydomonas rein...
CAA55326   79 LMAGYHGTIFAYGQTGAGKTFTMSGGGtAYAHRGLIPRAIHHVFREVDmradkmYRVHVSYLEIYNEQLYDLLgdtp--- 155 Chlamydomonas rein...
Q9WV04     81 ALDGYNGTIMCYGQTGAGKTYTMTGATeNYKHRGILPRALQQVFRMIEerpthaITVRVSYLEIYNENLFDLLstlpyv- 159 house mouse
Feature 1                                                                                     
3NWN_A    179 -gpsvtPMTIVEn-pQGVFIKGLSVHLTSQEEDAFSLLFEGETNRIIASHTMNKNSSRSHCIFTIYLEahsrtlSEEKYI 256 human
AAB88700  165 kledlpKVTILEdpdQNIHLKNLSLHQATTEEEALNLLFLGDTNRMIAETPMNQASTRSHCIFTVHLSsk--epGSATVR 242 Norway rat
P46870    156 --gtsdALAVLEdsnSNTYVRGLTLVPVRSEEEALAQFFLGEQGRTTAGHVLNAESSRSHTVFTIHVEmrtsdaASERAV 233 Chlamydomonas rein...
CAA55326  156 --gtsdALAVLEdsnSNTYVRGLTLVPVRSEEEALAQFFLGEQGRTTAGHVLNAESSRSHTVFTIHVEmrtsdaASERAV 233 Chlamydomonas rein...
Q9WV04    160 -gpsvtPMTIVEn-pQGIFIKGLSVHLTSQEEDAFSLLFEGETNRIIASHTMNKNSSRSHCIFTIYMEahsrtlSDEKYI 237 house mouse
Feature 1            #                                                                        
3NWN_A    257 TSKINLVDLAGSERLGksgseGQVLKEATYINKSLSFLEQAIIALGDqkrdHIPFRQCKLTHALKDSLGGNCNMVLVTNI 336 human
AAB88700  243 HAKLHLVDLAGSERVSktgvgGLLLTEAKYINLSLHYLEQVIIALSEkhrtHIPYRNSMMTSVLRDSLGGNCMTTMIATL 322 Norway rat
P46870    234 LSKLNLVDLAGSERTKktgvtGQTLKEAQFINRSLSFLEQTVNALSRkd-tYVPFRQTKLTAVLRDALGGNCKTVMVANI 312 Chlamydomonas rein...
CAA55326  234 LSKLNLVDLAGSERTKktgvtGQTLKEAQFINRSLSFLEQTVNALSRkd-tYVPFRQTKLTAVLRDALGGNCKTVMVANI 312 Chlamydomonas rein...
Q9WV04    238 TSKINLVDLAGSERLSktgseGRVLKEATYINKSLSFLEQAIIALGDqnrdHVPFRQSKLTHALKDSLGGNCNMVLVTNI 317 house mouse
Feature 1                          
3NWN_A    337 YGEAAQLEETLSSLRFASRMK 357 human
AAB88700  323 SLEKRNIDESISTCRFAQRVA 343 Norway rat
P46870    313 WAEPSHNEETLSTLRFASRVR 333 Chlamydomonas reinhardtii
CAA55326  313 WAEPSHNEETLSTLRFASRVR 333 Chlamydomonas reinhardtii
Q9WV04    318 YGEAAQLDETLSSLRFDSRMK 338 house mouse

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