1JNR


Conserved Protein Domain Family
PreA

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COG1146: PreA (this model, PSSM-Id:224069 is obsolete and has been replaced by 440761)
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NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit [Nucleotide transport and metabolism]
linked to 3D-structure
Statistics
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PSSM-Id: 224069
Aligned: 84 rows
Threshold Bit Score: 32.8244
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1JNR_B     1 MPSFVNPEK-------CDGcka----leRTACEYICPNDLMTLDKE---------------------------------- 35  Archaeoglobus fulgidus
15669354  27 IAKIIKSDRsivshylSGRypkekilnvAKIIEEMPPQYGAKFIHSltdnkelaknlikelygiklfwdensciacgscl 106 Methanocaldococcus ...
15679549  35 IAKALNMNRstvshylNGRnlswrsievAKVITEMCPRDFLLLTHSltqntemt-------------------------r 89  Methanothermobacter...
3219977  336 vrpVHHPER-------CTD---------CAVCLAARRCPTHAIDn----------------------------------- 364 Methanothermobacter...
15899306   1 --MGIDPNY-------RTN----------FPVSGEHSGHKVYGTveppg------------------------------- 30  Sulfolobus solfatar...
15898564   1 --MGIDPNY-------RQS----------RQVVGEHEGHKIYGPvdepk------------------------------- 30  Sulfolobus solfatar...
15898605     --------------------------------------------------------------------------------     Sulfolobus solfatar...
13540950   7 KPKPIDEHF-------LENd-------kDYPITGQHNNHDVRAEGMqrmdadgk-------------------------p 47  Thermoplasma volcanium
16082626  12 KPKPIDEHF-------LENd-------kDYPVTGQHNGHDVRAEGMqrldadgk-------------------------p 52  Thermoplasma acidop...
15791257   1 --MAIDPQF-------TEN----------RAQVDTHKGHDVWGPveepe------------------------------- 30  Halobacterium sp. N...
1JNR_B    36 -------KMKAYNREPDMCWECYSCVKMCPQG-AIDVRGYVDYSP 72  Archaeoglobus fulgidus
15669354 107 gcaaltlDNFTVGIDEDTCHLCASCIFRCPTN-SLKFIKEE---- 146 Methanocaldococcus jannaschii
15679549  90 tiirtcqKQKFQGKVRNSCIGCGLCVDTCLMKaISLRDLKAHIES 134 Methanothermobacter thermautotrophicus str. Delta H
3219977  365 -----------gLDLDR-CFGCGVCAWSCPSG-AYEMDTGTVRIG 396 Methanothermobacter thermautotrophicus
15899306  31 ---klgiHGTIVGVDFDLCIADGSCINACPVN--VFQWYDTPGhp 70  Sulfolobus solfataricus
15898564  31 ---vlgvHGTIVGVDFDVCIADGS--------------------- 51  Sulfolobus solfataricus
15898605   1 ----------------MLKSDNVSCITACPVN--VFRWFDTPGnp 27  Sulfolobus solfataricus
13540950  48 yptklgiHGTHVAVDWDCCIADGACMDVCPVN--LYEWNLNPGKS 90  Thermoplasma volcanium
16082626  53 yptklgiHGTHVAVDWDCCIADGACMDVCPVN--LYEWNLNPGKS 95  Thermoplasma acidophilum
15791257  31 ---klgvHGTHVAVDFDICLADGACLEDCPVD--VFEWVETPDhp 70  Halobacterium sp. NRC-1
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