Conserved Protein Domain Family
InfC

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COG0290: InfC (this model, PSSM-Id:223367 is obsolete and has been replaced by 440059)
Translation initiation factor IF-3 [Translation, ribosomal structure and biogenesis]
Statistics
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PSSM-Id: 223367
Aligned: 51 rows
Threshold Bit Score: 178.189
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
15828730  44 HQKKGQKNKVLLNNDIPFSKVFLIGEDGEKIGIKTKEEALDIARGEKKDLVLISVQ-PKPIARILDYGKFKYDRKKKEKE 122 Mycoplasma pulmonis
14194838   1 ---MSKEKEVLLNEEIRADEIRCVGDDGKVYGIISSDEALEIANRLGLDLVMIAADaKPPVCKIMDYGKFRYQQEKKQKE 77  Campylobacter jejuni
2497283    1 ---MSRN-EVLLNGDINFKEVRCVGDNGEVYGIISSKEALHIAQNLGLDLVLISASaKPPVCKVMDYNKFRYQNEKKIKE 76  Helicobacter pylori
12045048   8 PSKK--EQKPLVNEQIAFNQFTLIDENSTNLGIVKMENALKLAQEKQLDLVLIAPNpTKPIVKLLDFGRYTYDLKRKKRQ 85  Mycoplasma genitalium
2497284   26 GSRREREQKPLINDKIGFNEFILIDENGSNLGTVRRTDALKMAEEKQLDLVLIGSNpAKPIVKLLDFGRYTYDLKRKKRQ 105 Mycoplasma pneumoniae
15644338   1 -----------------------------MIGVMPTRKALELAREKGLDLVLVAPNeNPPVARIMDYGKYKYQLTKKQKE 51  Thermotoga maritima
14194840   3 SNNDARKNQPLINDQIRFRTMVVIDDHGNNLGEMNRIDALNLAASKNLDLVVIAKKgNIPVTKILDYGKYKYEQKRRQKE 82  Ureaplasma parvum
17232115  32 EKKR-TRDLPQINERIRFPKIRVIDTDGSQLGILTPQEALQLAEEKELDLVLLSDKaDPPVCRIMDYGKYKFEQEKKARE 110 Nostoc sp. PCC 7120
7387798    1 ---MSRN-EVLLNGDINFKEVRCVGDNGEVYGIISSKEALKIAQNLGLDLVLISASaKPPVCKVMDYNKFRYQNEKKIKE 76  Helicobacter pylori...
2497285    3 DKRRPQRDLPQINERIRFPEIRVIDSDGAQLGIITPNEAMEIADERGLDLVLVSETaDPPVCRIMDYGKYKFEQEKKARE 82  Synechocystis sp. P...
15828730 123 QKEKQTNINNRQIRLTPLIGDHDLLTKAKKTRELLLKGDRIKVSLKFKGREIARKELGIDTLNRFYEQVEDIAKIDKEPk 202 Mycoplasma pulmonis
14194838  78 AKKKQKVIDIKEIKLSVKIAQNDINYKVKHALEFLEQGKHVRFRVFLKGREMATPEAGVALLEKIWTMIENEANRDKEP- 156 Campylobacter jejuni
2497283   77 AKKKQKQIEIKEIKLSTQIAQNDINYKVKHAREFIESNKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMQDLANPEKEP- 155 Helicobacter pylori
12045048  86 AKKNQTIIQTKEVVVKPTIAKHDLEFRAKQSKNWIEKGHHVKFIVRAFGRVSTRIELIEKVFDDFYQLVKDVVEIQKPLt 165 Mycoplasma genitalium
2497284  106 SKKNQTIIQIKEVVVKPTIAKHDLEFKAKQTTGWAEKGYHVKFVVRAFGRVSTRIELIEKVFNDFYLLVEPAVEVQKPLt 185 Mycoplasma pneumoniae
15644338  52 NKKKP--VQMKQMKFRLKIDEHDYQTKVKHIRRFLEDGHKVRVVVMFIGREMMFAEKGKEILERVIKDTedLATVESPP- 128 Thermotoga maritima
14194840  83 SRKNQTIIKVKEIKIKPMIGEHDLKVRAENAKRWLEDKDNVKFVIEARGRMCTKDEFIVQAYEKFIDLIKDYGTVVQANk 162 Ureaplasma parvum
17232115 111 ARKKQHTADVKEVKMRYKIEEHDYNVRVKQAERFLKDGDKVKATVMFRGREIQHSDLAEDLLKRMATDLEPFGEVQQAP- 189 Nostoc sp. PCC 7120
7387798   77 AKKKQKQIEIKEIKLSTQIAQNDINYKVKHAREFIESNKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMQDLANPEKEP- 155 Helicobacter pylori...
2497285   83 AKKKQHTADVKEVKMRYKIDEHDYQVRINQAKRFLKAGDKVKATVNFRGREIQHAHLAKELLDRMATDLATEADIQQAP- 161 Synechocystis sp. P...
15828730 203 LNQDRFLDMYLHPDKQK 219 Mycoplasma pulmonis
14194838 157 NFEGRYVNMLVTPKKA- 172 Campylobacter jejuni
2497283  156 KTEGRFVSWMFVPKAKE 172 Helicobacter pylori
12045048 166 ASSKTMYAALLVPLKR- 181 Mycoplasma genitalium
2497284  186 ASSKTMYSALLVPRKK- 201 Mycoplasma pneumoniae
15644338 129 KMEGRDMWMVLKPKNS- 144 Thermotoga maritima
14194840 163 KVSNYRYETIIEPIKK- 178 Ureaplasma parvum
17232115 190 KKEGRNMMMLISPKK-- 204 Nostoc sp. PCC 7120
7387798  156 KTEGRFVSWMFVPKAKE 172 Helicobacter pylori J99
2497285  162 KREGRNMMMFLSPKKV- 177 Synechocystis sp. PCC 6803
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