4OY2


Conserved Protein Domain Family
TAFII55_N

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pfam04658: TAFII55_N 
TAFII55 protein conserved region
The general transcription factor, TFIID, consists of the TATA-binding protein (TBP) associated with a series of TBP-associated factors (TAFs) that together participate in the assembly of the transcription preinitiation complex. TAFII55 binds to TAFII250 and inhibits it acetyltransferase activity. The exact role of TAFII55 is currently unknown. The conserved region is situated towards the N-terminus of the protein.
Statistics
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PSSM-Id: 461382
Aligned: 121 rows
Threshold Bit Score: 107.213
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4OY2_D               27 IESGVILRILPdIQLEFVKNSLESGD---YSGISIKW-KNERHAVVTINDVXYGAILVDLPTVIEVNKSVDRKNLLKTFD 102 Saccharo...
EFA00911             14 LECQFILRLPE-EPARVLREAIRNNst-lKDRVAIKIeNDMRHGEVRIDHWLLPAKVMDLPTIIESLKTIDSKGFYKTAD 91 
EFN79745             19 LESQYILRLPP-EPARVLKETLNNGls-lKDRLTIKLeNDLRYGEVRLDHWLLHAKVVDLPTIVESLKTIDNKSFYKTAD 96 
ETN66016             18 LETQFIMRMPR-EPAGLLREAIQSGAnnlKDRLTIRLdNDLRYGEVRFDHWLLHAKVVDLPTIIESLKTIDSKNFYKTAD 96 
OWR42999             14 LETQFIMRMPE-TPGKALSELIKSGen-fKNRLTIQIeNDMRHGEVRFDQWVLHAKIVDLPTIVESWKTIDRKSLYKTAD 91 
XP_004929824         14 LESQFILKLPE-HPAKILRELLKSGen-lKNRLTIQIdNDMRRGEVRLDHWLMHAKIIDLPTIVESLKTIDGKSFYKTAD 91 
EEB15287             17 LESQFILRLPP-EPAKILRELIQSGAnnlKDRLSITIeNDMRTGEVRLDHMLLHAKVVDYPTIIESLKTIDNKTFYKTAD 95 
XP_001944364         11 LETEVILRVPS-EAAATLRELIKKd---aKEQISIKLeNDIRKGEVIIGNHHLFAKVVDLPTIIEGQKTIDNKTVYKTAD 86 
EDX12036             23 LESQFIMRVPK-ELADTVHEAINAGTi--KERLTIQLdQDLRYGEVRIDDQILYTKLVDLPTVVESYKTIDNKSFYKSAD 99 
WGS:AAPU:GI20310-PA  19 LENQFIIRFPK-EVAEGIHEAIQTGNv--KDRLFIKFdQDLRYGEVRFDDQMLYAKLVDLPTIMESYKTIDNKSFYKSAD 95 
4OY2_D              103 VSQXLLCirpiQEEEEV---YAleapdtedlvvkhfegiedeiwenketflkgyngaplsdxeakHLKEI---ALKGYDY 176 Saccharo...
EFA00911             92 ICQMLIC----KEEDDQtttDees--------------------------------------pqkSKRKDpnkVEKKYLM 129
EFN79745             97 ICQMVIC----KEEDDHtatDees--------------------------------------pvkQKKKDpnkVDKKFLW 134
ETN66016             97 ICQMMIC----KEEPDQhsaEees--------------------------------------pnkNKKKDpnkVDKKYLW 134
OWR42999             92 LCQLMIC----KEEADScteee---------------------------------------sptkNKKKDplkVDKKFLW 128
XP_004929824         92 ICQMMIC----KDGPDQpiaEeei--------------------------------------ptkNKKKDpykVDKKYLW 129
EEB15287             96 ICQMLLC----KEDDDQtttDdev--------------------------------------nskAKKKDpnrVEKKYLY 133
XP_001944364         87 ICQMIIC----KENEEFllsDEdek-------------------------------------akvFKKKEpnkVDKKYLW 125
EDX12036            100 ICQILIC----KEEREDeteke---------------------------------------spnkNKKKDpnkVDKKYLF 136
WGS:AAPU:GI20310-PA  96 ICQLLIC----KEEPEDeteke---------------------------------------spnkNKKKDpnkVDKKYLW 132
4OY2_D              177 KHGISPPLYNVRNRRFRRKXDPNEIDY--VEKVVDXLLKQDKQAE 219 Saccharomyces cerevisiae S288C
EFA00911            130 PHGITPPTKNVRKRRFRKTLKKKYVEApeIEKEVKRLLRIDNDAV 174
EFN79745            135 PHGITPSTKNVRRRRFRKTLKKKYVEApeIEKEVKRLLRVDNEAV 179
ETN66016            135 PHGVTPPCKNVRKRRFRKTLKKKYVEApeIEKEVKRLLRVDNEAV 179
OWR42999            129 AHGITPPTKNVRKRRFRKTLRKKCTEGpeIEKEVKRLLRADNEAV 173
XP_004929824        130 PHGVTPPTKNVRKRRFRKTLKKKFVEApeIEKEVKRLLRADNEAI 174
EEB15287            134 PHGLTPPMKNVRKRRFRKTLKKKYVEApeIEKEVKRLLRVDNEAV 178
XP_001944364        126 PHGVTPPLKNVRKRRFRKTLRKKYVEApeIEKEVKYLLKSDSEAL 170
EDX12036            137 PHGITPPCKNEVKHLLRMGGEEVRVDYeiINEEDKPMDELEQSDI 181
WGS:AAPU:GI20310-PA 133 PHGITPPCKNVRKRRFRKTLKKKNVETpeIEKEVKHLLRIDNEAV 177
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