4NL3,5SZD


Conserved Protein Domain Family
Hfq

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pfam17209: Hfq 
Click on image for an interactive view with Cn3D
Hfq protein
Statistics
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PSSM-Id: 435788
Aligned: 131 rows
Threshold Bit Score: 77.0849
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4NL3_I            8 LQDYYLNQLRKEKILATVFLTNGFQLRGRVVSFDNFTVLL--DVEGK--QQ-LVFKHAISTFSPQ--------------K 68  Listeria mon...
RR42:RR42_s0593  15 LQHLQLSTHSASRNPVVVHLSNGIRLHGVIMAADNYMVLL--AESAQdpLPqIVYKHSIAVITPAhapeatacvpgaetS 92 
WP_013405760      7 YQDHILNHVYENQIEVVVYFVNGYQLKGKISAYDNFTIIL--RSDQR--DQ-MIYKHAISTIAPV--------------E 67  Halanaerobiu...
KIV54973          6 LQDTMLKALQKNKVPLTIFTTKGIQIRGIITAFDQYMVMV--ESDNK--TQ-VLYKGAISTITPS--------------K 66 
WP_025334712      6 LQERMLSQFVQTKVPLTIFTTNGVKIQGIMTSYDAYTITLqgQSDGK--QS-VLFKSAVSTIVPL--------------R 68  Paenibacillu...
KPD09284          6 LQEYFLNQLRTSKTPVTVFTTNGFQIRGIITSFDSYTVAL--QSENK--QN-ILYKSAISTIVPL--------------K 66 
jgi:Desaci_4116   7 LQDAYLDQLQTTKTPVIVHLLSGVQIKGKIIGNDIFTIVL--EFEGK--QQ-MLFKQMISTISPL--------------R 67 
Q2FYZ1            7 IQDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSL--NSQGK--QH-LIYKHAISTYTVE--------------T 67  Staphylococc...
Q49X97            7 IQDKFLGQFKADQTKIIVFLVNGFQMKGTIEDYDKYIVCL--LSQGK--QH-LIYKHAISTFTID--------------E 67  Staphylococc...
ACJ01191          7 LQSKVLDVLRTGGTEVTVFLVTGVRLVGRIVAHDAYSLALtgHGGG---LQ-LIYKHAVTTLVPS--------------S 68 
4NL3_I           69 NVA 71  Listeria monocytogenes
RR42:RR42_s0593  93 PEF 95 
WP_013405760     68 KIS 70  Halanaerobium hydrogeniformans
KIV54973         67 PVR 69 
WP_025334712     69 PVS 71  Paenibacillus sabinae
KPD09284         67 PVT 69 
jgi:Desaci_4116  68 PVN 70 
Q2FYZ1           68 EGQ 70  Staphylococcus aureus subsp. aureus NCTC 8325
Q49X97           68 AAT 70  Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 = NCTC 7292
ACJ01191         69 PLS 71 
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