Conserved Protein Domain Family
NikR

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COG0864: NikR (this model, PSSM-Id:223932 is obsolete and has been replaced by 440624)
Metal-responsive transcriptional regulator, contains CopG/Arc/MetJ DNA-binding domain [Transcription]
Statistics
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PSSM-Id: 223932
Aligned: 30 rows
Threshold Bit Score: 75.7875
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
15789462  11 CCYMSVVSVSMPEELLERLDDFADDHGYTGRSEVVREASRNLLGEFEDKKLEGRELMGVVTVVFDYETT-TVEEKMMHLR 89  Halobacterium sp. N...
14600786   1 -MAKRRFGVSIPEDLAQRLDEASR-RLGVERSRLVEKAVEALLEDYRHLLTR-HSCSGIIIVSCPPRG----EAEIATAV 73  Aeropyrum pernix
14602150   2 REVVTVVSVSLPDHLVRKVDRAVEEYGFKSRSDLIKTALQTFLEDEDNKSSG--S-YRLIVVLSDHKSSpYVDKNIVGLI 78  Aeropyrum pernix
15613084   7 SSTK-RIVVNLPQHLLNEVDGVIK-QEKVNRSEFFSQATKMYLRERKKRQIREKMQQGYLEMAKINLNI-ASEAFLAEEE 83  Bacillus halodurans
16077532   4 SSARTEMKISLPENLVAELDGVAM-REKRSRNELISQAVRAYVSERTTRHNRDLMRRGYMEMAKINLNI-SSEAHFAECE 81  Bacillus subtilis
15893784   1 MSSSKRLVVNLSETLYDEFNKALK-EDCKKRSEFIREAIILYIEERKKLQQIELVKKGYSEMAKLNIEI-CECGFSSDLE 78  Clostridium acetobu...
2495786    1 ---MERISLTIEKNLLKEVDEIIN-KERISRSEFIRRALEYYVKKYDWLSRI-ESKIGEITVIYNSKA----VEDIVKLE 71  Methanocaldococcus ...
18313040   1 ---MKRFGVSLPKQVAEEVERLSQ-EIGVTRSEIVAAALQEYLESRRDHVKPEHNCMGIVLALSSSFS-----DIGEIIE 71  Pyrobaculum aerophilum
17369737   1 -MSAEKISISLPKELYRELEDFIIRKGIPDRSKIFQIALRNYLDENRDGNEI---IYGIINLVYDHEE---ASEALTEIQ 73  Sulfolobus solfatar...
16799959   4 KEKRMIISVELTQEMVQELDVVVE-KEKMGRSEVIMEATQQFLQEKRARELRDEMERGYAEMATINFAI-ACECTHVEAE 81  Listeria innocua
15789462  90 HEHEGLVASNFHSHVGGHHCMELFVLEGSLESISTFVGKIRAT-KDTLTIDYSVLPVD 146 Halobacterium sp. NRC-1
14600786  74 EKFRDIVAARLHSHTTG-RCIEAIIVEGDSMRIAMLHRQLESVgCGARYISMPLHP-- 128 Aeropyrum pernix
14602150  79 HSYSEELIALYHQILQGPYCITIAVV-GGKDDWRTIVKKLRSL-SGVLSVQSLPV--- 131 Aeropyrum pernix
15613084  84 AEHTLDRLVSGV---------------------------------------------- 95  Bacillus halodurans
16077532  82 AETTVERLVSGG---------------------------------------------- 93  Bacillus subtilis
15893784  79 DLNQYEVMLSESDLLDD-----NS---GKTRRYILC---------------------- 106 Clostridium acetobutylicum
2495786   72 SQYKDIVIISLEIPFEG-KIIRMIAIKGQRDRIIEFTNKLKGI-SSVELAQLTTISIE 127 Methanocaldococcus jannaschii
18313040  72 S-YKPFIVAYTHLHVEG-KCLTITVVRGDGGEVEKMVLEMG---RRAQVIRYVPLE-- 122 Pyrobaculum aerophilum
17369737  74 HEYNDSIISTLHLHVSEKICIEAIAVKGEKRKLVELNNKLGQI-RGILKARLLISFPY 130 Sulfolobus solfataricus
16799959  82 AEDRNISILGG----------------------------------------------- 92  Listeria innocua
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