Conserved Protein Domain Family
TIP49

?
COG1224: TIP49 (this model, PSSM-Id:224145 is obsolete and has been replaced by 440837)
DNA helicase TIP49, TBP-interacting protein [Transcription]
Statistics
?
PSSM-Id: 224145
Aligned: 13 rows
Threshold Bit Score: 596.641
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
15899195  24 EMS-EIRE----LKKPIREKASIHSHIKGLGLDSNGKAKFIADGLVGQAEAREAAGVVVQLIKQGKMSGKGILFVGPPGT 98  Sulfolobus solfatar...
11499401   1 -MAgEIRE----ITQTFER-ISAHSHIRGLGLDENLRAKDVADGLVGQKRAREAAGVIVRLIKSGKMAGRGILMAGPPGT 74  Archaeoglobus fulgidus
14600633  24 GVSgEIRA----EVVRG-FGASRHSHITGLGLDADGRARKIGGGLVGQEEAREAAGVIVEMVREGRLGGRGILIVGPPGT 98  Aeropyrum pernix
19173260   1 --MvKSS------------NIAIHSHVRSLGLDDCGNPVEKPDAVIGQENAREAAGLIVEMVRTKRMSGRAVLISGPVGS 66  Encephalitozoon cun...
19074927   1 --MeIR-------DVETVNRINLHSHIAGLGCDGD-EVEYDKDGLVGQIKARKAMAVIRKMVESN-KGGKVVLIKGDRGS 69  Encephalitozoon cun...
20093447   1 MVEiKEIG----EVSTEETSPGAHSHITGLGLDENLKAKPVGDGLVGQEEAREAAGIVVEMVKQGRRAGHGLLLVGPPGT 76  Methanopyrus kandle...
14520579   1 MAViEELP----TIKFER--VGAHSHIRGLGLDENGKAKFIGDGMVGQIKAREAAGIAVKLIKQGKLAGKGILLVGPTGS 74  Pyrococcus abyssi
18312811   1 -MSiKIEE----VKTQF-ERFAAHSHIKGLGVR-DGKVEFIGDGFVGQVEAREAAYIVVKMIKEGKFAGKGVLIVGPPGT 73  Pyrobaculum aerophilum
14591557   1 MAViEELP----AIKFER--VGAHSHIKGLGLDENGKAKFIGDGMVGQVKAREAAGIAVKLIKQGKLAGKGILLVGPTGS 74  Pyrococcus horikoshii
19115695   4 ISEvKGN--------GRDNRITTHSHIKGLGLKEDGTCESVGGGFIGQEKAREACGIITDLIKSKKFGGKGVLFAGGAGT 75  fission yeast
19112432   4 SVTsHN-------DVSKLERIGAHSHIKGIGLNDNLEPKESSQGMVGQVKARRAAGVILKMIQEGRIAGRAILMAGPPST 76  fission yeast
6320396    4 ISEvKENPgvnsSNSGAVTRTAAHTHIKGLGLDESGVAKRVEGGFVGQIEAREACGVIVDLIKAKKMSGRAILLAGGPST 83  baker's yeast
6325021    4 QTSdPNET----SDLKSLSLIAAHSHITGLGLDENLQPRPTSEGMVGQLQARRAAGVILKMVQNGTIAGRAVLVAGPPST 79  baker's yeast
15899195  99 GKTALAVAIARELGEDTPFTAINASEIYSTELKKTEILTQLIRKSIGVRIREKRLVYEGVVKDRKIKVARSRLNPYSQAP 178 Sulfolobus solfatar...
11499401  75 GKTAIAVAISKELGKDIPFVQVSASEFYSAEMKKTEALIQAMRKAIGVRIRETRTVLEGEVVGLDYNMVPNPYNPTQKIP 154 Archaeoglobus fulgidus
14600633  99 GKTALAIAIARELGEDTPFVALNAGELFRGDSGKLEMLLQAFRKAIGVRVRERREVVEGVVTSISVSKRRTPFSPY-PVI 177 Aeropyrum pernix
19173260  67 GKTALAVGISEELGAGTPFTSMSGSEVYSNEVKKTEVLEEALRRSILVRMRELKDVYEGEVVELRIVDEENPLSSYPKRI 146 Encephalitozoon cun...
19074927  70 GKTALAIGLSKSLG-GVHFNSISGTEIYSLEMSKSEAITQALRKSVGLRIKESVKVIEGEVVSLSGRR------------ 136 Encephalitozoon cun...
20093447  77 GKTAIAYGIARELGEDVPFVSISGSEIYGTNLSKTEFLQQAIRRAIGVEFTETREVIEGKVESLEIERAKHPLSPYMEVP 156 Methanopyrus kandle...
14520579  75 GKTAIAMGIARELGEDVPFVQISGSEIYSAEVKKTEFLKQALRRAIGVRISEERKVYEGMVEKMEVRRTRHPFNPYIEVP 154 Pyrococcus abyssi
18312811  74 GKTALALGIARELGSETPFVALSGGEIYSLEVKKSEFLMRALRRAIGIKVREWRKVYEGEVRSIELRYGKHPYNPYLQRV 153 Pyrobaculum aerophilum
14591557  75 GKTAIAMGIARELGEDVPFVQISGSEIYSAEVKKTEFLKQALRRAIGVRISEERKVYEGMVEKMEIRKTRHPFNPYIEIP 154 Pyrococcus horikoshii
19115695  76 GKTALALAIAQELGPKVPFCPMVGSEVYSSEIKKTEALMENFRRAIGLRVKETKEVYEGEVTEMVPEEAENPLGGYGKTI 155 fission yeast
19112432  77 GKTAIAMGMAQSLGSDTPFVTLSASEVYSLEMSKTEALLQALRKSIGVRIKEETEIIEGEVVEVQIDRSITGGNKQ---- 152 fission yeast
6320396   84 GKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGLRIKETKEVYEGEVTELTPEDAENPLGGYGKTI 163 baker's yeast
6325021   80 GKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKSIGIKIKEETELIEGEVVEIQIDRSITGGHKQ---- 155 baker's yeast
15899195 179 VEAQITLTTKDDERTLSVGEEIAQQLVSLGVKKGDVIMIDAQTGQVIVEGKAKGFEGaKTYDIETTKVLEMPTGPVRKEK 258 Sulfolobus solfatar...
11499401 155 ESATLTLATKDEKRTFSVGGRLAMQFFTQGIEVGDVIVIDKETGRIGKLGRSEKAK--KKYDLGDDEVVPVPSGKVEKEK 232 Archaeoglobus fulgidus
14600633 178 AGARITLETKDESRTFTVGPEVAEQLVALGVRRGDVIVIDLETGVVRVVGRGKGRG--QSFDIDVVREVELPEGPVRKVK 255 Aeropyrum pernix
19173260 147 KEMFVILKTSKESKKLKLAPSLYEQIDKQRIVNGDVVYIEVNSGVIKKLGRSEAHMN--DFDLEADTYVPIPKGEVLKRK 224 Encephalitozoon cun...
19074927 137 ----IVLKTVDMESSFEIGEKMRGELDKEKVSAGDVIRIVRERGRVYKIGTSMVKRS--DVVGTDTRFVPCPEGELIRIT 210 Encephalitozoon cun...
20093447 157 SGAIIELKTQDDHRRFKVPEEIAIQLVQAGVREGDVIQIDVESGHVTKLGRAKDALEeEEEELLGVHAVELPEGPVQKKK 236 Methanopyrus kandle...
14520579 155 ESVIITLKTKDDKKTIRAGREIAYQLLELGIEEGDVIQIDAETGRVSRIGTTK-----EEEGLFFRKKVELPSGPVLKIK 229 Pyrococcus abyssi
18312811 154 MGATIKLRTRDEEKVLRIPAEIAQQIIELGVEEGDIIMIDEETGAVSVLGRGEGGE---QYDVAIKRRAELPKGPVYKEK 230 Pyrobaculum aerophilum
14591557 155 ESIRITLKTKDDKKTIRAGREIAYQLLDMGVEEGDVIQIDAETGRVSKIGTTK-----EEEGLFFKKKVELPTGPVLKIK 229 Pyrococcus horikoshii
19115695 156 SHVLLGLKTHKGTKQLKLDPSIYESLQREQVSTGDVIYIEANTGAVKRVGRSDAYAT--EFDLEAEEYVPMPKGEVHKRK 233 fission yeast
19112432 153 --GKLTIRSTDMETVYDLGTKMIDSLTKEKVLAGDVISIDKSVGRVTKLGRSFSRARdYDAMGADTRFVQCPQGEIQKRK 230 fission yeast
6320396  164 SHVIVGLKSAKGTKTLRLDPTIYESIQREKVSIGDVIYIEANTGAVKRVGRSDAYAT--EFDLETEEYVPLPKGEVHKKK 241 baker's yeast
6325021  156 --GKLTIKTTDMETIYELGNKMIDGLTKEKVLAGDVISIDKASGKITKLGRSFARSRdYDAMGADTRFVQCPEGELQKRK 233 baker's yeast
15899195 259 EITTTLTLNDLDLNLAARN----LAVTAIFSFFTer-eINEDVRKEVDRLVKDWINQGRAELVVGVLFIDDAHTLDLEAF 333 Sulfolobus solfatar...
11499401 233 EFTYVVTLHDLDEANARRTs---IFSLFSPPSRE----IDNEVREAVDEQVKRLVEEGRAELVPGVLFIDETHLMDIELF 305 Archaeoglobus fulgidus
14600633 256 EFVRTLTLHDIDASIAAQR----VAFTGLLSMFEaergVTSEDRKKTDELVKKWVGEGKAEIVAGVIFIDDAHLLDMESF 331 Aeropyrum pernix
19173260 225 EVMQSVTLHDLDMANARPSgq-dMLSLVFRILSPrkteITERLRGDVNRMVNGYLENGNAEIVPGVLFIDEVHMLDVECF 303 Encephalitozoon cun...
19074927 211 EETQEISLHDIDVVNSKAEg---YLALFSGETGE----IRAETRDEVNKKVWGWINEGKAEIVRGVLFIDEVHMLDIESF 283 Encephalitozoon cun...
20093447 237 EIKRVVTLHDLDMANVRAG------RLLGFREEE----ITDEIRQKVDERVQKMVDEGEASLVPGVLFIDEAHMLDIEAF 306 Methanopyrus kandle...
14520579 230 EFTYTVTLHDLDVVNARAGg---IFSLIFGGGME----INDEIRERVDQTVKQWIEEGKATLVPGVLFIDECHMLDIEAF 302 Pyrococcus abyssi
18312811 231 EIVRFFTLHDIDVSLARQRg---LISAMIFGFAEevkeIPDEVRRQSDEIVKKTVEEGKAELVPGVLFIDDAHLLDIESF 307 Pyrobaculum aerophilum
14591557 230 EFTYTVTLHDLDVVNARAGg---IFSLIFGGGME----INDEIRERVDQTVKQWIEEGKATLVPGVLFIDECHMLDIEAF 302 Pyrococcus horikoshii
19115695 234 EIVQDVTLHDLDIANARPQggqdIMSMMGQLMKPkkteITDKLRGEINKVVNKYIEQGIAELIPGVLFIDEVHMLDIECF 313 fission yeast
19112432 231 EVVHTVSLHDIDVINSRTQg---FLALFSGDTGE----IKPEVREQINTKVSEWREEGKAEIVPGVLFVDEVHMLDIECF 303 fission yeast
6320396  242 EIVQDVTLHDLDVANARPQggqdVISMMGQLLKPkkteITEKLRQEVNKVVAKYIDQGVAELIPGVLFIDEVNMLDIEIF 321 baker's yeast
6325021  234 TVVHTVSLHEIDVINSRTQg---FLALFTGDTGE----IRSEVRDQINTKVAEWKEEGKAEIVPGVLFIDEVHMLDIECF 306 baker's yeast
15899195 334 SFLTRALESELAPILILATNRGLTKIRGTD-IESPHGIPLDLLDRLLIIPTRPYNADEIKEIIKIRADELEIELDPQALE 412 Sulfolobus solfatar...
11499401 306 AFMNRAMESEMAPIIILASNRGFSRIRGTD-IVAPHGIPLDLLDRLLIITTEPYSREEIKTIIEIRAAESGIMLSNEAME 384 Archaeoglobus fulgidus
14600633 332 SFLSKAMESDLAPIIVLATNRGVAKIRGTD-IESPHGIPRDLLDRLLIITTRPYTRDEIKEIIRIRADEEEVLLSENALE 410 Aeropyrum pernix
19173260 304 TFLHKVIESPLSPTIIFASNKGMAPIKGSDgLLGPFGITKDLLDRIVIISVKRNPDEANREIIRRRMKEEGLEMDDDAFG 383 Encephalitozoon cun...
19074927 284 AFLNKAVEEDFCPVILVSTNKGECIVRGTD-EPSPYGIPRDFIDRALIISMEKHCRRDLEAILRHRILEEDILIDDDAVD 362 Encephalitozoon cun...
20093447 307 AFLNRSLEEEIAPILVMATNRAMAKVRGTD-EEAPHGIPGDLLDRMLIARTRPFERHEIHEIIGIRARVQDIQLTDEAHE 385 Methanopyrus kandle...
14520579 303 SFLARAMENELAPILILATNRGMTKIRGTD-LEAPHGIPLDMLDRLLIINTEPYKKEEIREIIKIRAKEEKIELSEEALE 381 Pyrococcus abyssi
18312811 308 SFLMRAMETEFAPIIIMATNRGIAKIRGTD-VEAPHGIPQDMLDRLVIIKTRPYTAEEIREIITIKAKEQNISLSKDALE 386 Pyrobaculum aerophilum
14591557 303 SFLARAMENELAPILILATNRGMTKIRGTD-IEAPHGIPVDMLDRLLIINTEPYKKDEIREIIKIRAKEEKVELSEEALE 381 Pyrococcus horikoshii
19115695 314 TYLNQALESTISPIVIFASNRGICTIRGTEdIQAPHGIPTDLLDRLLIVRTLPYSESEIRSILQIRAKVENIILTDECLD 393 fission yeast
19112432 304 SFFNRALEDDLAPIVIMASNRGITRIRGTN-YRSPHGIPVDLLDRMLIISTLPYSHEEVKEILKIRCQEEDVDMEPSALD 382 fission yeast
6320396  322 TYLNKALESNIAPVVVLASNRGMTTVRGTEdVISPHGVPPDLIDRLLIVRTLPYDKDEIRTIIERRATVERLQVESSALD 401 baker's yeast
6325021  307 SFINRALEDEFAPIVMMATNRGVSKTRGTN-YKSPHGLPLDLLDRSIIITTKSYNEQEIKTILSIRAQEEEVELSSDALD 385 baker's yeast
15899195 413 ELTKIGVENSLRYSVQLLEPSLIIAQRNNRSIIKVEDVVIASKLFSDVKRSVKFVKEYENLLL 475 Sulfolobus solfataricus
11499401 385 KLTDIGEKTSLRYAVQLLAPAYEFAKMRNSGKVELEDVERAASIFADVSQSSAYLKKWEEKML 447 Archaeoglobus fulgidus
14600633 411 RLADIGSEKSLRYAIQLLEPAMIVAKRRGSRRVEAEHVEEAERLFADIKRSIQLVEKYRDLMM 473 Aeropyrum pernix
19173260 384 FFVGLSTSRSLRYCISLIP----LLKTYGG-CVSVRNVEEVAELFHDS--------------- 426 Encephalitozoon cuniculi
19074927 363 RLVSISEASGLRYSMNLLTISSMRASRR-NGRVALGDVERAFELFLDEARGTESFNG------ 418 Encephalitozoon cuniculi
20093447 386 YLTDLGEEKSIRYATRLLEPARIVAEKEGSEVVEKKHVERVEEVFTDVSDSVEYMERMRRELP 448 Methanopyrus kandleri AV19
14520579 382 YLAELGEKTSLRYAVQLLAPASIIA---GGKRVEREHVEKAKEYFADVKRSIAFVEKLEGMLK 441 Pyrococcus abyssi
18312811 387 LLTKIGVEHSLRYALQLLTPAYIIAKERGKASVTKDEVEYVKSHFISVKESVEYVKSLEEKFL 449 Pyrobaculum aerophilum
14591557 382 YLADLGEKTSLRYAVQLLAPASIIA---GGKRVEKEHVEKAREYFADIKRSISFVEKLEGMLK 441 Pyrococcus horikoshii
19115695 394 KLAQEGSRTSLRYVIQLLTPVSIIASLHGNKEIGVQDIEECNDLFLDARRSAQVVKSSSGFLQ 456 fission yeast
19112432 383 YLSTIGQETSLRYALLLISSSNQVALKRKSATIEESDIRRVYELFLDQKRSVEYLEEYGKNYI 445 fission yeast
6320396  402 LLATMGTETSLRYALQLLAPCGILAQTSNRKEIVVNDVNEAKLLFLDAKRSTKILETSANYL- 463 baker's yeast
6325021  386 LLTKTGVETSLRYSSNLISVAQQIAMKRKNNTVEVEDVKRAYLLFLDSARSVKYVQENESQYI 448 baker's yeast
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap