1K94,1K95,1F4O


Conserved Protein Domain Family
EFh_PEF_grancalcin

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cd16186: EFh_PEF_grancalcin 
Click on image for an interactive view with Cn3D
Penta-EF hand, calcium binding motifs, found in grancalcin
Grancalcin (GCA) is a cytosolic Ca2+-binding protein specifically expressed in neutrophils and monocytes/macrophages. It displays a Ca2+-dependent translocation to granules and plasma membrane upon neutrophil activation, suggesting roles in granule-membrane fusion and degranulation of neutrophils. It may also play a role in the regulation of vesicle/granule exocytosis through the reversible binding of secretory vesicles and plasma membranes upon the presence of calcium. Moreover, GCA is involved in inflammation, as well as in the process of adhesion of neutrophils to fibronectin. It plays a key role in leukocyte-specific functions that are responsible for host defense, and affects the function of integrin receptors on immune cells through binding to L-plastin in the absence of calcium. Furthermore, GCA can strongly interact with sorcin to form a heterodimer, and further modulate the function of sorcin. GCA exists as homodimers in solution. It contains five EF-hand motifs attached to an N-terminal region of an approximately 50 residue-long segment rich in glycines and prolines. GCA binds two Ca2+ ions through its EF1 and EF3 hands.
Statistics
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PSSM-Id: 320061
Aligned: 9 rows
Threshold Bit Score: 351.476
Created: 18-Nov-2014
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
  next features
Conserved site includes 7 residues -Click on image for an interactive view with Cn3D
Feature 1:Ca binding site [ion binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                    #      #                                                           #
1K94_A         1 SVYTYFSAVAGQDGEVDAEELQRCLTQSGingtyspfsleTCRIMIAMLDRDHTGKMGFNAFKELWAALNAWKENFMTVD 80  human
1K95_A         1 SVYTYFSAVAGQDGEVDAEELQRCLTQSGingtyspfsleTCRIMIAMLDRDHTGKMGFNAFKELWAALNAWKENFMTVD 80  human
1F4O_A         1 SVYTYFSAVAGQDGEVDAEELQRCLTQSGingtyspfsleTCRIMIAMLDRDHTGKMGFNAFKELWAALNAWKENFMTVD 80  human
NP_001005585  41 PMWGYFTAIAGQDGEVDAEELQRCLTQTGisgsytpfsleTCRIMIALLDRDYTGKMGFNEFKELFGVLNGWKQNFMMVD 120 zebrafish
NP_001119547  39 PLWGYFRAVAGQDGEIDAEELQRCLTQAGiqgtytpfsleTCRVLIAMLDRDFTGKMGFSEFKEVWGALSAWKQNFCTFD 118 western clawed ...
ETE70522      55 PLWAFFSATAGQNGEVDAEELQRCLTQSGisgtyspfsleTCRIMISMLDRQNTGKMGYNEFKELWTALSAWKHNFMLVD 134 king cobra
NP_001085654  43 PMWGYFRAVSGQDGEIDAEELQRCLTQAGingnytpfsleTCRIMIAMLDRDHTGKMGFNEFKELWGVLSAWKQNFCTFD 122 African clawed ...
ACO14733      58 PMWGYFTTIAGQDGEIDAEELQRCLTQTGisgtytpfsleTCRIMIAMLDRDMTGKLGFIEFKELFAALSSWKQNFMMFD 137 Caligus clemensi
AFK11139      51 PMWGYFTAIAGQDGEVDAEELQRCLTQPGvhgtykpfsleTCRIMIAMLDRDMTGKMGFNEFKELWVALNGWKQNFMMYD 130 elephant shark
Feature 1         # #   #  #                                                                     
1K94_A        81 QDGSGTVEHHELRQAIGLMGYrlspqTLTTIVKRYSKNGRIFFDDYVACCVKLRALTDFFRKRDHLQQGSANFIYDDFLQ 160 human
1K95_A        81 QDGSGTVEHHELRQAIGLMGYrlspqTLTTIVKRYSKNGRIFFDDYVACCVKLRALTDFFRKRDHLQQGSANFIYDDFLQ 160 human
1F4O_A        81 QDGSGTVEHHELRQAIGLMGYrlspqTLTTIVKRYSKNGRIFFDDYVACCVKLRALTDFFKKRDHLQQGSADFIYDDFLQ 160 human
NP_001005585 121 RDHSGTVEPYEMSQSIANMGYrvsprVLDAIVKRYSRSGKIYFDDYVACCVKLKALTDHFRRRDTMQQGMVNFQYDDFIL 200 zebrafish
NP_001119547 119 QDRSGTVEPHELNQAIFAMGYrlsppTLSTIVKRYSKNGRIYFDDYVACCVKLRALTDVFRRRDGMQQGFVNFIYDDFLQ 198 western clawed ...
ETE70522     135 QDRSGTVEFHVLTQVIVAMGYrlspqTLIAIVKRYSKNGRISFDDYVACCVKLRALTDFFRRRDSMQQGIVNLLYDDFLQ 214 king cobra
NP_001085654 123 QDRSGTVEPHELNQAIFAMGYrlspqTLNSIVKRYSKSGRIYFDDYVACCVKLRALTDLFRRRDGMQQGFVNFIYDDFLQ 202 African clawed ...
ACO14733     138 QDRSGTVEPHEMSQSISAMGYrispqALNAVIKRYSKAGRIYFDDYVACAVKLRALTESFRRRDQMQQGAVNFQYDDFIL 217 Caligus clemensi
AFK11139     131 QDKSGTVEPLELGQAIVSMGYrlspqAISGIIKRYCKDGKTYFDDYVACCVKLRAVTDAFRRRDSLQQGYVNFGYDDFIQ 210 elephant shark
Feature 1             
1K94_A       161 GTMAI 165 human
1K95_A       161 GTMAI 165 human
1F4O_A       161 GTMAI 165 human
NP_001005585 201 CTISL 205 zebrafish
NP_001119547 199 CTMAI 203 western clawed frog
ETE70522     215 CTMAI 219 king cobra
NP_001085654 203 CTMAI 207 African clawed frog
ACO14733     218 CTMSI 222 Caligus clemensi
AFK11139     211 CTMSI 215 elephant shark

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