Conserved Protein Domain Family
Chitin_bind_4

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pfam00379: Chitin_bind_4 
Insect cuticle protein
Many insect cuticular proteins include a 35-36 amino acid motif known as the R&R consensus. The extensive conservation of this region led to the suggestion that it functions to bind chitin. Provocatively, it has no sequence similarity to the well-known cysteine-containing chitin-binding domain found in chitinases and some peritrophic membrane proteins. Chitin binding has been shown experimentally for this region. Thus arthropods have two distinct classes of chitin binding proteins, those with the chitin-binding domain found in lectins, chitinases and peritrophic membranes (cysCBD) and those with the cuticular protein chitin-binding domain (non-cysCBD).
Statistics
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PSSM-Id: 459790
Aligned: 85 rows
Threshold Bit Score: 38.0086
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q17BL9        41 FQYSYESGNGIKV-----EDQGElkvvevpkedgtGTEQAQVSVQkGSYSYNAPDGTPITLQ-WTADENGF 105 yellow fever mosquito
XP_002020458  46 YRFNLEEPNGSKR-----EEIGVim--------npGTDKEELVVM-GSYSVYDEKTDTDTVTmYTADKDGY 102
Q2M099        44 YNFSYLSEDGTHR-----REEAVlr--------npGTDNEYLEIS-GSYSYFDANGQEVTVT-YKADDHGF 99  Drosophila pseudoobscura
EDW36302      42 YNSQYSTADGTSR-----QEEASvv--------dkDTEDEALEVK-GSYKYINEDGQEVEVH-YTAGKNGF 97 
Q17CD7        98 AMFGYTDHNQ-AR------LEAR---------------NANGEVR-GSYQYVDPFGQEVVVQ-YWSDSLGF 144 yellow fever mosquito
Q7QCN4         5 YAFTYSAGRS-PGhvdrtHSEVS---------------DGSGVVR-GSFSYVDPRNQVRTVE-YTADSHGF 57  Anopheles gambiae str. PEST
Q7K5J8        32 YVFSYQAGRA-PGhvdrqHTEVS---------------DGSGVIR-GAFSYVDPKNQVRTVQ-YVADEHGF 84  fruit fly
Q16UY4        36 YQYGYNDGHA-VK------EESR---------------YADGTVR-GSYRYVDANRVTQNVI-YRADKNGY 82  yellow fever mosquito
Q9VV44        49 YSYGYSEPLS-SK------QETR---------------TLDGITQ-GYYSYRDAAGKLQTVN-YVADNKGF 95  fruit fly
Q9VV45        45 YAYGYMAPLY-SK------HETR---------------TVDGVIR-GTFSHIDANGETQTVD-YVADAEGF 91  fruit fly
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