4GQO


Conserved Protein Domain Family
SBP_bac_8

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pfam13416: SBP_bac_8 
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Bacterial extracellular solute-binding protein
This family includes bacterial extracellular solute-binding proteins.
Statistics
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PSSM-Id: 433189
Aligned: 57 rows
Threshold Bit Score: 88.2315
Created: 25-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4GQO_A         48 EXAKAYEK-----ENp-D--VT-IEVSQXkESPSSEATIQSAIASK--TApTx-sENINRSFAAQLADSKAIV-PLN--- 111 Listeria monoc...
jgi:Cwoe_4943  60 AYIAPFEQ-----AT--G--NS-VVRA-S-PS--EMGKLQAQVRTG--KVtDsivELDSIQA-VAAGALGLTE-PID--- 118
Q92WH0         59 flfgPFTK-----DT--G--IE-IRTVS----PISFAKLAAQKTTG--VY-EfdvTTLGVADVARANGAGLLE-TLEg-- 118 Sinorhizobium ...
WP_012405260   47 AYFEPFTQ-----AT--G--VG-FSTESY-DG--GLAKLSAMEQAK--Nt-TwdlIDLETNDAITACDEGLLK-KFD--- 106 Paraburkholder...
Q16DN7         46 AYHNPYME-----KT--G--VT-IINDES--SAEAVSKLRAMNEAG--NI-TwdvVDVVAADALRLCDEGLAM-EID--- 106 Roseobacter de...
Q28SX8         46 AYSDPYAA-----MHd-G--LE-IIWDES--SAEAVARLRAMNEAG--NI-TwdlVDVVAADAIRLCDEGLAM-EID--- 107 Jannaschia sp....
Q8YP06         53 qAAKNFNAtqpklDN--GnaFR-VECEAQ-GSGDVVTKLLGLTNQL--KNgTl---QADGADFPTIIS--LDG-DIY--- 117 Nostoc sp. PCC...
jgi:Haur_1116  55 AVVSDFNAss--aKTasGqrIQ-VEAVPV-GSLETINGLLD----G--Sq-QadlWSPASSLSLPLANQRWKT-AKG--- 119
Q2JQ84         77 WVRSQLQE-----RY--G--IR-LNRIPLtDTVEAVNKVIGEVQAGlrSGgSidlIWINGNNFRTLKQGNLLYgPFAe-- 144 Synechococcus ...
WP_012582896   46 TAIEAFKK-----AHp-Dl-IEdIEYLKA-TAPELPAKIKAQQMAG--NVtTt-mVLTGYDAMASGLEMDLWE-NIYpty 113 Dictyoglomus t...
4GQO_A        112 --DV-KGLDDvvkernXs--E---TXDSWKFs-DG----NQYVLPVYSnPI--LFAWRlDTL---KElgydA-------P 166 Listeria monoc...
jgi:Cwoe_4943 119 --YAaVRAAP------Md--P-------AAR--HE-----NALCYQYY-ST--IPAWRaGA----------R-------A 154
Q92WH0        119 --HV-DTSKL------We--G---AIYQ-----NG----LATHGFAT------QMAYNaAKF---PE------------G 154 Sinorhizobium ...
WP_012405260  107 --K--TTLGK------Ts--D---FIPG-SI--SD-----CAV-ASMVwST--VFAYDaSKL---K-----T-------A 145 Paraburkholder...
Q16DN7        107 --AD-EMLAP------Ap--DgtpASEDFGDllVG-----DCFIPQIVyST--TVGYRtDMV---GD----T-------P 154 Roseobacter de...
Q28SX8        108 --HD-EMLAP------Ap--D---GTPASED--FGdlivSDCFIPQIVyST--TVGYRtDVA---EW----Ng-----nT 157 Jannaschia sp....
Q8YP06        118 --HS-QLIYR------In--Q---VFPGQNY--IPq---ITDAPLLANsPM--VFMAQaDVAgglQ-----K-------V 164 Nostoc sp. PCC...
jgi:Haur_1116 120 --EL-LFSDQ------Tp--Ts-lVLSPVV----------IGMWKPM--AQ--ALGYPdKQI---GW----AdladlatS 166
Q2JQ84        145 --KL-PSLTF------YdpaD---IATDFGLptEG-----YSAPYT-GnYF--LMAYDaERV---P-----N-------P 189 Synechococcus ...
WP_012582896  114 kqYF-PNLESr----yLp--G---AKAAFDLf-KG-----YGIVVTYCp-GgpMFTYNpEKV---K-----R-------V 161 Dictyoglomus t...
4GQO_A        167 PKTYSEALEVGKKLKAKYpd-------kvLWak---gdLSDPT-A-----WXRWFDFFplydaaskgnafveDGKLVADD 230 Listeria monoc...
jgi:Cwoe_4943 155 LPSVQQFFD-VDGYPGKR-----------SL-------PDYPT-F-----ALPLAAVA--------------DGVPLDRV 195
Q92WH0        155 LKNWSDFFN-VEKFPGNR-----------SL-------QRHAA-R-----VLAIALLA--------------DGVPADQL 195 Sinorhizobium ...
WP_012405260  146 PTSVNDFFD-LQKFPGKR-----------GL-------RKSPK-V-----SMEWALIA--------------DGVDPNDV 186 Paraburkholder...
Q16DN7        155 PTSICALFD-TEGYPGKR-----------AL-------EKRPI-N-----NMEWALLC--------------DGVAKDDV 195 Roseobacter de...
Q28SX8        158 PSDICAIFD-TEAFPGQR-----------SL-------ERRPI-G-----NLEWALIC--------------DGVAMEDV 198 Jannaschia sp....
Q8YP06        165 PDAYKALVT--AKTHRDIdpsspsltvnyVH-------TAPTRsN-----SGLQTLVA--------------QYTSVSGK 216 Nostoc sp. PCC...
jgi:Haur_1116 167 GKTWADFGH--PEW-GAF-----------QFghthpefSNSGL-A-----TIVAMAYA--------------ANQKTSDL 212
Q2JQ84        190 PQSHAELLAWAEANPGRF-----------TY-------VAPPDfH-----GSRFLLSAfygvtg---gyaqySGPDFDAD 243 Synechococcus ...
WP_012582896  162 PQTAEELLEWAKQNPGKF-----------MY-------ARPAN-SgpgraFLQGLPYI--------------LGDKNPKD 208 Dictyoglomus t...
4GQO_A        231 ka-------gTELLTFXSELQ----KNKLLL---------A-S--KATD-PFETGTSIXAD---N--GP--WTFPN-WDe 278 Listeria monoc...
jgi:Cwoe_4943 196 fpl-----dvDRAFAALDRIK----DDVDVW---------WsSgaQPAQ-LLRDGEVDYAL---A--WS--GRIAA---- 245
Q92WH0        196 fpy-----dlDRAFASLDRIK----DHVRVW---------WtAgpQARQ-ILTDGEVDMAG---L--WD--SDAFG-AK- 247 Sinorhizobium ...
WP_012405260  187 ykvlatpagvDRAFRKLDTIK----KNIVWW---------E-SgaQAPQ-LLADGAVVMTQ---A--YN--GRIDDaAK- 243 Paraburkholder...
Q16DN7        196 ydvletdegqQQALDKLATIK----DDVIWW---------S-AgaDTPQ-LLADGEIVMGS---T--YN--GRLFS-VI- 251 Roseobacter de...
Q28SX8        199 ydvleteegvEQAFAMLDTIQ----DQTVWW---------S-AgaDTPQ-LLADGEVVMGS---T--YN--GRLFS-LI- 254 Jannaschia sp....
Q8YP06        217 rp-------eELTIADVQTFQ----PQIQQIqskitrygvS-TnsLAQA-MVKNGPFWASV---GsvYE--SSVIA-ANs 277 Nostoc sp. PCC...
jgi:Haur_1116 213 tvad---ldkPETASLINAVE----QSVIHY---------G-Ss---TG-FFAKTMYEHGP---S--YL--SAAIL-YEn 263
Q2JQ84        244 lwa----rqsPALVEYLRKLDpflwRQGQTY---------PpTfaRLAE-LFANGEVWLIP---T--FI--DQVIL-RK- 300 Synechococcus ...
WP_012582896  209 pk------twEKTWAYLKELD----KYIDYY---------P-TgtAITFrELAEGTRWIIAshlG--WDmnQRILG-VI- 264 Dictyoglomus t...
4GQO_A        279 kf-------pelKy-NE----NYAITAPlvpdsxvneeNVAT-YADSKGVV--XYA----QATDKEkeaAXDFLKFVY-N 338 Listeria monoc...
jgi:Cwoe_4943 246 ------------Qd-GI----EHTY--------------DGG-LLDLGCLV--VPR----GAPHVEq--ANALLHEYS-L 284
Q92WH0        248 ------------EasKD----PIEIVW------------DQA-VVDKACWI--VAK----DSPRAEn--GFKLISHIGqN 290 Sinorhizobium ...
WP_012405260  244 ------------Kd-NK----PFKAVW------------DAQ-VYDFDWWG--IPT----GARHSDt--AAKFIVSAS-Q 284 Paraburkholder...
Q16DN7        252 ------------EeqKQ----PVGMLW------------DAQ-VFDLDGWI--IPA----GLPEDRlarALDYVYFAT-D 295 Roseobacter de...
Q28SX8        255 ------------EeqDQ----PVAMLW------------DAQ-VFDLDGWI--IPE----GLPEDRlarTLDFVRFAT-D 298 Jannaschia sp....
Q8YP06        278 s----------lQp-GQe---RYQAVYP----------KTTF-TSNMRAIVpnAPW----VSADEKa-gAEKFITYWR-S 326 Nostoc sp. PCC...
jgi:Haur_1116 264 liiesydqalypNl-EL----PMVAIYP----------KEGS-FWSDHPLV--VLEtermNADKRAa--AQVFQEFLL-A 322
Q2JQ84        301 ------------Gn-GQfppsTTPYGIP----------G-TS-LIDPSFTA--IPI----NAANPWg--AMVLAEVLA-S 346 Synechococcus ...
WP_012582896  265 ------------P---S----NFKAFFL----------KNTTwVTDAHFMC--MPK----GLDEARkraTLQLMSWLL-R 308 Dictyoglomus t...
4GQO_A        339 DDkNDLKFLE--TTNLI-PARDDATEnetfTAF--FK-------ENPEL 375 Listeria monocytogenes EGD-e
jgi:Cwoe_4943 285 PA-NQAELAR--LIPYS-GPAEGMAR----LVA--PE-------RAKLL 316
Q92WH0        291 AE-GLAKFCI--ADQNG-PMNPKSFDf--iPAE--VA-------Armpt 324 Sinorhizobium meliloti
WP_012405260  285 PK-AYADLSK--YIAYA-PPRKDAIA----LVD--KQ-------RLTDL 316 Paraburkholderia phymatum
Q16DN7        296 TQ-RLADQSK--WISYG-PARASSAPlvstHAElgIE-------MAPHM 333 Roseobacter denitrificans OCh 114
Q28SX8        299 TQ-RLADQSR--WISYG-PARASSAPlvgtHADlgIE-------MAPHM 336 Jannaschia sp. CCS1
Q8YP06        327 PD-AQK-FAT--DLGLR-PGTPGVAL----GAK--FSpefgvvaqakyd 364 Nostoc sp. PCC 7120
jgi:Haur_1116 323 QP-QQAKAMQ---YGFR-PANVDISL----AAP--ID-------TAHGV 353
Q2JQ84        347 PE-GQLEKFKpeVWGDL-PLIDVSRL----SAD--YQtafaqleAAAGI 387 Synechococcus sp. JA-2-3B'a(2-13)
WP_012582896  309 AE-MQALTYDd-GYFYPgPAIKGVPLsa-aPKE--TQ-------DK-IK 344 Dictyoglomus turgidum
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