Conserved Protein Domain Family
partition_RepA

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TIGR03453: partition_RepA 
plasmid partitioning protein RepA
Members of this family are the RepA (or ParA) protein involved in replicon partitioning. All known examples occur in bacterial species with two or more replicons, on a plasmid or the smaller chromosome. Note that an apparent exception may be seen as a pseudomolecule from assembly of an incompletely sequenced genome. Members of this family belong to a larger family that also includes the enzyme cobyrinic acid a,c-diamide synthase, but assignment of that name to members of this family would be in error. [Mobile and extrachromosomal element functions, Plasmid functions]
Statistics
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PSSM-Id: 274585
Aligned: 20 rows
Threshold Bit Score: 618.917
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_013850289  24 DEAIAADARALSEQLKAMRDRLFAPTAMKTLRSFTSGEAAKLIGVSDGYLRQLSLAGEGPQPdTGAGGRRSYSLSDINAL 103 Sinorhizobium m...
WP_010968237   8 LAFMENFSSKLEMALNNLSMAQFPPNARRTMRKFTSTEVATLLGVTEAYIRQVAAKEQGPEP-EIANGRRFYTLEQVLEL 86  Sinorhizobium m...
WP_011331445  11 NAVIRQHSELLAAQLHSQRESLFPPDASKSMRKFTSGEAAALLGVNDSYLRKLHLDGKGPSPeVSSGNRRHYSAEDIHNL 90  Rhodobacter sph...
WP_011331263   8 DRLVGDHAARLSERLMAHRAQLFPPNARKELRRFTSGEVAALLGVKDAYLRKLSLEGRGPQPeTGPGGRRLYRSDDIMEL 87  Rhodobacter sph...
WP_011251431  16 DELLSQQARALSERLQAHRLELFPPNASKTLRSFQIGEVAKLLGLAPGYLRNLALEGKGPLPaIGNGGRRHYTAEQISDL 95  Gluconobacter o...
WP_011427625  15 DQLIIGQAQELSDKLKQHRLEMFPPRALKGLREFQLAEVARFLGVTSGYLRNLSLEGKGALPqVTPSGRRSYTAEQMEEM 94  Rhizobium etli
WP_011578655  15 DVLLTEQARELSAMLHEHRLEMFPPNAQKTLRPLQLSEAAQYLGVTSGYLKNLSLEGKGPQPmVTPSGRRSYTAEQLLEM 94  Chelativorans s...
WP_006191554  13 DDMILRQGREISRKLNLLRHENFPPDARKNLRQFSMAEAAYFLGVSPSNLKKLHLEGKGVEPtILSGGRRAYNVEQIQEL 92  Brucella
WP_010974972  16 PSLLSADAQELAHQLQEHQKKIFSPSAQKTMRLFSPAEAAAFIGIGEGYLRQIASEGHGPQP--LSNGRRMYAMEDIDRI 93  Sinorhizobium m...
WP_011505049  16 RSLINADAAELSARLRAQQLRDFPPAAEKTIRRFSSAEAARFIGIAEGYLRQLVSEGKGPSA--PANSRRSYSIEDIDAL 93  Nitrobacter ham...
WP_013850289 104 RRHLAEqaiakgnGAKARGYLKWRDaaRSEHLQVISVTNFKGGSGKTTSSVHLAQYLALTGHRVLAVDLDPQASLSALFG 183 Sinorhizobium m...
WP_010968237  87 RMALAA-------NGRKKWMNPRRT--GNEQCQIVAVTNFKGGSSKTSTTIHLGHYLALKGYRVLAVDLDPQASLTALHG 157 Sinorhizobium m...
WP_011331445  91 RILLEKt------ARKAGDYLPGRR--AGDHLQIIGVMNFKGGSGKTTSSAHLAQRLALKGYRVLAIDLDPQASLTALHG 162 Rhodobacter sph...
WP_011331263  88 RTLLEKr------AKAPGTYLPGRR--EGDHLQVITVINFKGGSGKTTTAAHLAQKLALDGYRVLAIDLDPQASLSALHG 159 Rhodobacter sph...
WP_011251431  96 RRYLDQn------SRSQKRYVPCRS--GSEGLQVISVVNFKGGSGKTTSAAHLAQGLALDGLRVLAIDLDPQASLSALHG 167 Gluconobacter o...
WP_011427625  95 RGFLEHn------ARAGTHYVRHRR--GHEHLQVVAVVNFKGGSGKTTSAAHLAQHLALTGHRVLAVDLDPQASLSAIHG 166 Rhizobium etli
WP_011578655  95 RHFLDKn------SRTAAKYVPHRR--GIEHLQIIAVVNFKGGSAKTTTAAHLSQHLALTGHRVLAVDLDPQASLSALHG 166 Chelativorans s...
WP_006191554  93 RRWLDQn-----gRAEVKRYVPHRR--GNEKLQVIGVVNFKGGSGKTTTAAHLAQHLALTGHRVLAIDLDPQASLSALHG 165 Brucella
WP_010974972  94 RRVLDE-------GSKTGKYIPHRR--PGEKLQVVSVMNFKGGSGKTTTSAHLAQYLALRGYRVLAIDLDPQASLSALFG 164 Sinorhizobium m...
WP_011505049  94 RRDLDSa------GKGARRYVPHRR--DTEALQVISVMNFKGGSGKTTTAAHLAQYLAFRGYRVLAIDLDPQASLSTLFG 165 Nitrobacter ham...
WP_013850289 184 YQPELDLTGNDTLYGAIRYDAeARPLKDIIRKTYFDGLDLVPGNLELQEFEHTTPQALSARQSgadagPLFFARVQAALA 263 Sinorhizobium m...
WP_010968237 158 SLPEFDYRGGDTLFSAIRFDD-PVPTKSIIHKTHIVGFDVICAGLELTEFETAVALEMRRSAG-----TGFLLRVSQALE 231 Sinorhizobium m...
WP_011331445 163 VQPEFDLLDGGTLYDAIRY-EhPVPITEVIRKTYIPNLDLIPGNLELMEFEHETPRALSRGNA-----GLFFFRVKEALA 236 Rhodobacter sph...
WP_011331263 160 FQPEFDLLDGGTLYDAIRYED-PLPLSSVVQKTYFTGLDIVPGNLELMEFEHDTPRALSVRGG-----NLFFTRISDALA 233 Rhodobacter sph...
WP_011251431 168 FQPEFDVHANETLYGAIRYDDeRRPLSDLVRNTNFPGLDIVPGNIELMEFEYETPRLLASSDQa---gAIFFSRVDEALQ 244 Gluconobacter o...
WP_011427625 167 FQPEFDVNENETLYAAIRYDDqRRPLRDIIRPTNFPNLHLVPGNLELMEFEHDTPRVLAQGKAsd-ygRVFFARLDEALA 245 Rhizobium etli
WP_011578655 167 FQPEID--HNESLYESLRYDDeRKPLSALVQKTNFPGLDIVPANLELQEFEYDTPLALSQKDGsm--gRIFFGRLDDALA 242 Chelativorans s...
WP_006191554 166 IQPELD--EFPSLYEAIRYDSeRKSIREVIRRTNFPGLDIIPAMLELQEYEYDTPLAMQNGGEg----KTFWNRIAKALA 239 Brucella
WP_010974972 165 HQPELDVGEGETLYGAIRY-EaPRPIAEVVRSTYTANLHLIPGNLELMEFEHETPKAMIAGSTe----TMFFARIGEVLS 239 Sinorhizobium m...
WP_011505049 166 HQPELDVGDNETIFGAIRYDSeRRPMPEIVRATYIPNLHIVPGQLELMEFEHETPKALMTRQSn---dSMFFARIGEALA 242 Nitrobacter ham...
WP_013850289 264 SVADDYDVVVIDCPPQLGYLTLSALCASTSVIVTVHPQMLDVASMNQFLYMTSDLLSVVRDAGGELNFDFLRYLVTRFEP 343 Sinorhizobium m...
WP_010968237 232 QVADDYDFVLMDSAPSLNFLTLSSLTAATGVIIPVPAHMLDVDSTAKFLELAGSYMQILNEVGTAAQWDFAKFLITKFEP 311 Sinorhizobium m...
WP_011331445 237 QVDERYDVVVIDCPPQLGFLTMSALSAATGVLVTIHPEMLDVMSMSQFLRMTADLMDVIADSGADMSHDWMRYLLTRYEP 316 Rhodobacter sph...
WP_011331263 234 EIESDYDLVVIDCPPQLGFLTMSALSAATAVLVTVHPQMLDVMSMCQFLLMTSNLLGVVADAGGDMSYDWMRYLVTRYEP 313 Rhodobacter sph...
WP_011251431 245 DVEENYDVIVIDCPPQLGYLTMSAVCAATGLLVTVHPQMLDVMSMCQFLLMMGDVMTHLRDAGANVSYDWVRYLLTRYEP 324 Gluconobacter o...
WP_011427625 246 SVADDYDVVIIDCPPQLGFLTMSAICGATAVLITVHPQMLDVMSMCQFLQMLGEVLNTLKGAGGNMNLDWLRYLVTRYDP 325 Rhizobium etli
WP_011578655 243 DVAKDYDVVIIDCPPQLGYLTLTALSSSTGILITVHPQMLDVMSMCQFLLMMGEVMGTLKRAGANMRLDWLRYLVTRYEP 322 Chelativorans s...
WP_006191554 240 EVDDSYDVVVIDCPPQLGYLTLTALSAATSVLITVHPQMLDLMSMSQFLLMLGDILKTVRQAGGAVHLDWFRYLITRYEP 319 Brucella
WP_010974972 240 EIESFYDIVVIDCPPQLGFLTMSALCAATSVLITVHPQMLDVMSMSQFLSMTSELMAVVENAGGRTSYDWMRYLVTRFEP 319 Sinorhizobium m...
WP_011505049 243 QVSDVYDVVVIDCPPQLGFLTLSALCAATAVLITVHPQMLDVMSMSQFLNMTGSLLDVVAEAGGATQYDWMRYLVTRYEP 322 Nitrobacter ham...
WP_013850289 344 NDGPQAQIVGFMRSLFGDRVLTSAMVKSTAISDAGLTKQTLYEVGRENFT-RATYDRAIESLNAVNGEIEALIHAAWGR 421 Sinorhizobium me...
WP_010968237 312 NDHPQANMSALMRQVFGEDLLLNSVIKSTAVADALTWKQSLYEVQRSRFSaPKTYDRAIESINAANAELEGLFWKAWGR 390 Sinorhizobium me...
WP_011331445 317 TDAPQNRIVAFLRTMYGDKVLNAPMLKSTAISDAGLTKQTLYEVERSAFT-RTTYDRAIESLNAVNDEIAQLIQMTWGR 394 Rhodobacter spha...
WP_011331263 314 GDGPQNQMVSFMRSLFGDHVLNHPVLKSTGISDAGLTKQTLYEVEKSDFT-RSTYERAMESLNAVNKEIEGLIQTAWGR 391 Rhodobacter spha...
WP_011251431 325 SDGPQTQMSGFMRTVFGDHVLTNPMLKSTAVSDAAITKQTLFEIERKQFT-GSTYDRALESVNAVNGEIRDLIFRAWGR 402 Gluconobacter ox...
WP_011427625 326 QDGPQTQMVAFMRSMFKSHVLTNPMLRSVAISDAAMTNQTLYEVERSQFT-RATYDRAMEAMESVNTEIVDLIHKAWGR 403 Rhizobium etli
WP_011578655 323 TDGPQSQMVAFMRSLFKQHVLVNEMLKSTAISDAGITKQSLYEVERVQFT-RSTYDRAMESLHRVNAEITSLIHRAWGR 400 Chelativorans sp...
WP_006191554 320 TDVPQAQMVGFMQSMLASHMLKHQMLKSTAISDAGLTKQTLYEVDRSSMN-RGTYDRAMDAMEAVNSEIRGLIHEAWGR 397 Brucella
WP_010974972 320 NDGPQSQMTGFMRAIFGNRMLQNAMVKSTAISDAGVTKQTLYEVERSQFI-RGTYDRAMDSLSLVNAEIEEMIRRVWGR 397 Sinorhizobium me...
WP_011505049 323 SDGPQTTMVGLMRSIFGSRVLTHPMVKSTAIADAGLTKQTLYEVERQQFT-RGTYDRAIEALDLVNGEIESLIKQVWKR 400 Nitrobacter hamb...
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