Conserved Protein Domain Family
HEXIM

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pfam15313: HEXIM (this model, PSSM-Id:405901 is obsolete and has been replaced by 464638)
Hexamethylene bis-acetamide-inducible protein
HEXIM is a transcriptional regulator that functions as a general RNA polymerase II transcription inhibitor. In cooperation with 7SK snRNA it sequesters P-TEFb in a large inactive 7SK snRNP complex preventing RNA polymerase II phosphorylation and subsequent transcriptional elongation. HEXIM may also regulate NF-kappa-B, ESR1, NR3C1 and CIITA-dependent transcriptional activity.
Statistics
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PSSM-Id: 405901
Aligned: 25 rows
Threshold Bit Score: 93.2528
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_005796724 160 WKPYNKLSWEEKKALEERETVRASRMREEMFAKG-LPVAPYNTTQFLMDEHDREepdln-------------teagVRRl 225 southern platyfish
XP_019850119  80 WKPYSKMSLEERKQVDEWEEKHVAIREAEINARSkRPVAPFNSTQFLIDDRCED----------------------QYR- 136 Amphimedon quee...
OWR53811       1 ------MSWQERRKVDN--TKRNNRFRKIVLTKT-Q--APFNNNQFLMEIHK-Pepenn-------------fllyRTPs 55  Danaus plexippu...
XP_006567926 129 LKPYSKQQLSYQQQLRYRSRGRLAKTGR-------QPPALYNTTQFLMDDHS-DlpdldqklseaasselpatfqkPSAp 200 honey bee
EGI69951      99 LKPYSKQ-LSYQQQLRSKYIGRIAKTSR-------QPPALYNTTQFLMADHS-DlpdleqklseaaslevpalfpkPWAp 169 Panamanian leaf...
EKC18378      89 WKPYEKLSWNERRELEERETVRANQKREEAFAHG-HPVAPYNTTQFLMEDHGKAdqnig-------------egqlNRN- 153 Pacific oyster
EDV20910      85 FSNYQNLSCQEKAELEEMAAEEATQLYNQRIQSG-LPVTPFNTTQFIMDDYE---------------------------- 135 Trichoplax adha...
XP_003729518  98 WKPYTQLSWEERQQRDEEESRRASLKRAN------RP-TPYNTTQFLMEDHKVVtpd--------------------lsn 150 purple sea urchin
EDO36416      27 DKEIFDFSVVPVKR-----------------AKG-RTAAPENTTQFLMDDHEKFepfv---------------lssPSLs 73  starlet sea ane...
XP_002609570  79 WKPFVKLSWEERKDLEERERKRAMRVREMMFAEG-RTVAPYNTTQFLMEDHETQsxf-----------------hsPNLe 140 Florida lancelet
XP_005796724 226 SGVSGRMEDTGSEEDLFDNEEEEDddgsggggsdgigrpgnaGGEY-LQRDFSETYEMYHVESLQNMTKQELVQEYLELE 304 southern platyfish
XP_019850119 137 RPSRTLSFDSSSGDDVHYDLSDED------------------QEAF-LEADFNQVYLQLKLNRLEGMSKQDLISQCCNLE 197 Amphimedon quee...
OWR53811      56 ARTRDSSFSIDSEDNYFHSLPEDE-------------------EEY-LTKEFSSVYEDAQCERLSNMSKNELIQEYLLLE 115 Danaus plexippu...
XP_006567926 201 SRTRDSSFSVDSDEDYFYSSPEDE-------------------EEF-LTKEFSTAYEDLHAERLSTLSKSELIQEYLQLE 260 honey bee
EGI69951     170 SRTRDSSFSVDSDEDYFYSSPEDE-------------------EEF-LTKEFSTAYEAVHEERLSTLTKTELIQEYRHLE 229 Panamanian leaf...
EKC18378     154 NSRESTDGSGSTSDSSEEMYSEEE--------------------EF-LEKEFAETYDNMHAERLQKMSKDELIKDYIEME 212 Pacific oyster
EDV20910     136 -KARARSVNDNSDDLLDEIQRMEDks---------------eNGNYsGEDEFTAHLEEIRFDKYDRMSKGELVRYCYQLD 199 Trichoplax adha...
XP_003729518 151 MGAFDENHDVNLSSSDEVLENENE--------------------EY-LVRNFTAVYDEVQSERLQQMSKEQLVNEVLELS 209 purple sea urchin
EDO36416      74 PNSSGCEFSSSSVRGSPVCERDLQsvtelv---------gnfdelY-FEKDFNDVYDSIHAETLLGLSKQELIYKYMELE 143 starlet sea ane...
XP_002609570 141 VLQRQQSNDTSNSDDMPDSPEDDFg----------------mEAGF-FEKDFSETYEQFHAESLNNMSKTDLIREYLEME 203 Florida lancelet
XP_005796724 305 KCMSRL 310 southern platyfish
XP_019850119 198 DKVSVI 203 Amphimedon queenslandica
OWR53811     116 AKYDNL 121 Danaus plexippus plexippus
XP_006567926 261 AKVDLL 266 honey bee
EGI69951     230 AKMDSL 235 Panamanian leafcutter ant
EKC18378     213 TKLDRL 218 Pacific oyster
EDV20910     200 KKIQQL 205 Trichoplax adhaerens
XP_003729518 210 KKVSEL 215 purple sea urchin
EDO36416     144 KKEENL 149 starlet sea anemone
XP_002609570 204 KCVERL 209 Florida lancelet
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