5Y9P,3O3G


Conserved Protein Domain Family
RnhB

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COG0164: RnhB 
Ribonuclease HII [Replication, recombination and repair]
Statistics
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PSSM-Id: 439934
Aligned: 994 rows
Threshold Bit Score: 102.064
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5Y9P_A        72 HPNAIICGIDEVGRGPLAGPVVACATILNSNH----NYLGLDDSKKVPVTKRLELNEALKNEVT-AFAYGIATAEEIDE- 145
WP_009886645   1 mD---ECGIDEAGRGPLIGPMVMAILCGDREs---lEIIGVADSKKLSPGRRESLFARLQSY---KYNFVIISPSEIDRy 71 
WP_088820511   1 --miIIGGGDEAGRGPLIGPLILSLVLIKSSAsiklSGIGVRDSKMLSRKKRDLLYNQIKDIAF-DIKVDSIEAEEINNa 77 
WP_052567998   1 -mSSLSMGIDEAGRGPVIGPMVVAAVILKRREakrlKEMGVTDSKLLSAERREELFPMIIESAE-SYLIKVIEPKRIDEa 78 
WP_052570424   1 ---mIVAGIDEAGRGPVIGSMFVALVAIEQDQleklVSLGLKESKMLTPNKRRYFYNLIMKTAK-LVLIKEVKAEEIDK- 75 
WP_013336730   1 -mQVLVGGIDEAGRGPVIGPMVMAIAVTN--DmnrlKAMGIRDSKELSPAGRARLFSILKSTLN-YIDYEIVEPRVIDNy 76 
WP_011007803   1 ----MIGGIDEAGRGPVIGPMVIAIVVGESdd---mIKIGVRDSKRLSPGAREAVYEKILRVAA-CVNYVVIEPAEIDAy 72 
WP_010916389   9 H-EEVQCGIDEAGRGPVIGPMVISIVCCKEEy---lREIGVKDSKMLSRKRREYLFDKITKNC--AYSYVVVSPETLNKd 82 
AAM01403       1 --msgVMGIDEAGRGPVFGPMVVAGVLAPKREl----gLGARDSKELTRSARRRLIRALMSDERlRVDLRIVWPWEIDE- 73 
WP_011178064   1 ---mCVCGIDEAGRGPVIGPMVMAMVCADDI------NFYVNDSKLLTRNKRSLIFNDVSGL---YHKYYIINPAEIDDa 68 
5Y9P_A       146 ----FNIYKATQIAMQRAIDG----LSv--QP--T----HLLIDAM------T----LDn-----------------A-- 180
WP_009886645  72 v-ehQKLNVLEETYASKLAS-----W----APasS----TVYVDSFdvn-elRlqslLMen---------------tK-- 119
WP_088820511  78 mksnISLNELEAVHFAKLFDS----V----SD--DtfvsKVYLDSPdri-aeKfgirFSassykntvvqnakqstkkGvk 146
WP_052567998  79 v-skNMLNLLEAEVMSELIRE----L----RP--A----RVIVDSPmrn-crKfsdvLRefl------------gdsS-- 128
WP_052570424  76 ----RNLSELTIEVMKELLET----ALnkvKI--D----VVCVDIVgn--gaKqrraLGev------------------- 120
WP_013336730  77 v-ymNALNILEVEIAIKLINRalnsV----SP--Q----VVYIDSPdpr-peRyrdmVKrgv-------------vgN-- 129
WP_011007803  73 vs-rgMLNALELKYTAQLINL----C----PA--E----YYYVDSPdvn-pkRyesgLVfa---------------tG-- 119
WP_010916389  83 m-asESLNKIEENYILELLSK----A----E---G----IVYIDCFdvi-eeRaekyIRek---------------sG-- 128
AAM01403      74 ----EGVAKAEFEAIRELVRR----A----MP--D----EVILDKPgnyspeRlrreLDlp---------------eG-- 118
WP_011178064  69 v-kkHSLNNLEEQYAEKLILK----A----EC--E----KIYIDCFdvn-esRleriLKdr---------------tG-- 115
5Y9P_A       181 -LPQVSLIKGDARSVSIAAASIMAKVFRDDYMTQLSKDYpeyGFEKNAGYGTKQ-HLLAIDDI----GIMK--EHRKSFe 252
WP_009886645 120 -RQIVCRHKADEIYPCVSAASIIAKVIRDREIDKLHKDY---G-DFGSGYPSDPrTINFVKNAlkngINIDs-IVRHQWk 193
WP_088820511 147 yTKIIAEHKADVKYPVVSAASIIAKVTRDIAMDEISSSL---GIDLGSGYPSDHkAIDNLRENls-nkELSk-YVRTQWs 221
WP_052567998 129 -VKIIAENKADSKYIQVASASIIAKVERDRRIRELSELT---GVEIGSGYPGDPkTREAIRMIlkgaEF-PrdQVRWKWa 203
WP_052570424 121 fPDVIVMKKGDASCPAAAAASIVAKEARERHVSQLRARY---G-DFGSGYPSDPkTLRWLSVT----RPLPp-IVRKKWk 191
WP_013336730 130 -VEVVAMNNADKLIPVVSAASIVAKVIRDSIIEELHREY---G-DFGSGYPSDPrTMAFLRDWvkrhGDLPp-IVRRSWs 203
WP_011007803 120 -KRVIALHKGEAV-PQVAAASIVAKVVRDRLIQLLKKEV---G-DFGSGYPSDPrTLQRLRE-----GRMPseCIRWQWk 188
WP_010916389 129 -KEVVCKHKADSIYPAVSAASIVSKVIRDREIDKIAEKY---G-FFGSGYPSDPrTIDFLRKAmqqgLDLRs-VARIHWe 202
AAM01403     119 -INLIAEERADAKYEVVSAASIVAKTYRDWIVRLLELEY---G-EVGSGYPSDPrTVDRLRRElrrgGELLk-YFRRSWe 192
WP_011178064 116 -KEVICRHHADRDIKIVSAASIIAKVLRDNEIEKLKSIY---G-DFGSGYPSDPkTLRFLEHSiinhDNIDn-IVRKEWk 189
5Y9P_A       253 pikslL 258
WP_009886645 194 tyksmL 199
WP_088820511 222 tmktir 227
WP_052567998 204 tinrlL 209
WP_052570424 192 tirrkG 197
WP_013336730 204 tvrklL 209
WP_011007803 189 tvggrI 194
WP_010916389 203 tykkiK 208
AAM01403     193 tykrvE 198
WP_011178064 190 tyknlV 195
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