Conserved Protein Domain Family
nusA

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PRK09202: nusA 
transcription elongation factor NusA; Validated
Statistics
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PSSM-Id: 236410
Aligned: 606 rows
Threshold Bit Score: 261.343
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
304373277  14 IKKfNFQEILQDISEFRKIDLNNIKDILQDSISRQIVSKLDSEAEIELVIDEQNPQefIVINKNGTVVTDqefsdMltva 93 
166155193   1 MNK-DLVAIFDYMEREKGIQRSTIVGAIESALKIAAKKTLRDDANVSVSINPRTGD--IEVFCEKQIVEK-----C---- 68 
15618236    1 MNK-NLVAIFDYMEKEKGIQRSTIIGAIESALKIAAKKTLRDDANISVNINSRTGD--IEVFCEKEIVEI-----C---- 68 
15835851    1 MNK-NLVAIFDYMEKEKGIQRSTIIGAIESALKIAAKKTLRDDANISVNINSRTGD--IEVFCEKEIVEI-----C---- 68 
16752722    1 MNK-NLVAIFDYMEKEKGIQRSTIIGAIESALKIAAKKTLRDDANISVNINSRTGD--IEVFCEKEIVEI-----C---- 68 
29840227    1 MNK-DLVAIFDYMEKEKGIQRPVIIGAIESALKIAAKKTLRDDANVSVNINPRTGD--IEVFCEKEIVEV-----C---- 68 
33241661    1 MNK-NLVAIFDYMEKEKGIQRSTIIGAIESALKIAAKKTLRDDANISVNINSRTGD--IEVFCEKEIVEI-----C---- 68 
297621094   1 MNK-DLVAIFEYLEKEKGIQREIVIHAIEESLQAAARKSVSGASNVTVQIDPKTGN--INVFSEKEIVDE-----V---- 68 
62185081    1 MNK-DLVAIFDYMEKEKGIQRPVIIGAIESALKIAAKKTLRDDANVSVNINPKTGD--IEVFCEKEIVEV-----C---- 68 
89898348    1 MNK-DLVAIFDYMEKEKGIQRPVIIGAIESALKIAAKKTLRDDANVSVNINPRTGD--IEVFCEKEIVEV-----C---- 68 
304373277  94 PEftHTdmsdkqtsfqsekiTFIPLSTAKEINPNAKVDDTFDIPIDISEFDKHIFVPIIQTFKQKIHEFTRKLIYQKYFP 173
166155193  69 QN--PS--------------KEIPLDKAREYDPDCQIGQYMDVPFISDQFGRIAAHAARQIIGQKLRHAERDVIYEEYRH 132
15618236   69 QN--PS--------------KEIPLDKAREYDPDCQIGQYMDVPFVSDNFGRIAAHAARQIIGQKLRHAERDVIYEEYRH 132
15835851   69 QN--PS--------------KEIPLDKAREYDPDCQIGQYMDVPFVSDNFGRIAAHAARQIIGQKLRHAERDVIYEEYRH 132
16752722   69 QN--PS--------------KEIPLDKAREYDPDCQIGQYMDVPFVSDNFGRIAAHAARQIIGQKLRHAERDVIYEEYRH 132
29840227   69 EN--PS--------------KEIPLDKAREYDPECQIGQYMDVPFVSEHFGRIAAHAARQIIGQKLRHAERDVIYEEYRH 132
33241661   69 QN--PS--------------KEIPLDKAREYDPDCQIGQYMDVPFVSDNFGRIAAHAARQIIGQKLRHAERDVIYEEYRH 132
297621094  69 EV--PA--------------QEILLEEAREIDPDCEIGQFIDILATPKDFGRIAAQKARQIISQKLRSAERDVIYEEYRH 132
62185081   69 EN--PS--------------KEIPLDKAREYDPECEIGQYMDVPFVSEHFGRIAAHAARQIIGQKLRHAERDVIYEEYRH 132
89898348   69 EN--PS--------------KEIPLDKAREYDPECQIGQYMDVPFVSEHFGRIAAHAARQIIGQKLRHAERDVIYEEYRH 132
304373277 174 LKNSIIKATLIKKSqnGF-NYLLE-GEIPAYMPKPN-ISNFNIALNTKEEVFIEDV-LD-NQKDSQIILSSKEGMILKEK 248
166155193 133 RKNEIISGVVKSFAr-GA-NLVVDlGKVEGLLPARFyPKTEKHKVGDKIYALLYEVqES-ENGGAEVILSRSHPEFVKQL 209
15618236  133 RVNETLSGVVKRFAk-GS-NLIIDlGKVEAILPTRFyPKTEKHKIGDKIYALLYEVqES-ENGGAEVILSRSHAEFVKQL 209
15835851  133 RVNETLSGVVKRFAk-GS-NLIIDlGKVEAILPTRFyPKTEKHKIGDKIYALLYEVqES-ENGGAEVILSRSHAEFVKQL 209
16752722  133 RVNETLSGVVKRFAk-GS-NLIIDlGKVEAILPTRFyPKTEKHKIGDKIYALLYEVqES-ENGGAEVILSRSHAEFVKQL 209
29840227  133 RVNEILSGVVKRFAk-GS-NLIIDlGKVEGLLPARCyPKTEKHKVGDKIYALLQEVqES-ENGGAEVILSRSHPEFVKQL 209
33241661  133 RVNETLSGVVKRFAk-GS-NLIIDlGKVEAILPTRFyPKTEKHKIGDKIYALLYEVqES-ENGGAEVILSRSHAEFVKQL 209
297621094 133 RVNEVVSGTVKRFV--KGaNLVVDlGKVEALMPMRQyPKTEKYKIGDRVLALLMEV-NDtDSGGAEVILSRSSPEFVRQL 209
62185081  133 RVNEILSGVVKRFAk-GS-NLIIDlGKVEGLLPARCyPKTEKHKVGDKIYALLYEVqES-ENGGAEVILSRSHPEFVKQL 209
89898348  133 RVNEILSGVVKRFAk-GS-NLVIDlGKVEGLLPARYyPKTEKHKVGDKIYALLYEVqES-ENGGAEVILSRSHPEFVKQL 209
304373277 249 LKREIPEVEAGILEIVNVAREAGLRSKVSVKkvhedENSQGVDEVGSLIGKNGSRIATINKEILGEKIDIVRYDPNITKY 328
166155193 210 FVQEVPELEEGSVEIVKIAREAGYRTKMAVR-----SSDPQTDAVGAFVGMRGSRIKNIIRELNDEKIDVVNYSPVSTEL 284
15618236  210 FIQEVPELEEGSVEIVKIAREAGYRTKLAVR-----SSDPKTDPVGAFVGMRGSRVKNIIRELNDEKIDIVNYSPVSTEL 284
15835851  210 FIQEVPELEEGSVEIVKIAREAGYRTKLAVR-----SSDPKTDPVGAFVGMRGSRVKNIIRELNDEKIDIVNYSPVSTEL 284
16752722  210 FIQEVPELEEGSVEIVKIAREAGYRTKLAVR-----SSDPKTDPVGAFVGMRGSRVKNIIRELNDEKIDIVNYSPVSTEL 284
29840227  210 FLQEVPELEEGFVEIVKIAREAGYRTKLAVS-----SSDPKTDPVGAFVGMRGSRVKNIIRELNDEKIDIVNYSPVTTEL 284
33241661  210 FIQEVPELEEGSVEIVKIAREAGYRTKLAVR-----SSDPKTDPVGAFVGMRGSRVKNIIRELNDEKIDIVNYSPVSTEL 284
297621094 210 MIQEVPEIVEGIVVIDKIEREAGYRTKLTVR-----ATDQKVDPVGACVGMRGNRVKNVVRELNSEKIDIIPYSDDPIEL 284
62185081  210 FLQEVPELEEGSVEIVKIAREAGYRTKIAVS-----SSDPKTDPVGAFVGMRGSRVKNIIRELNDEKIDIVNYSPVTTEL 284
89898348  210 FLQEVPELEDGSVEIIKIAREAGYRTKLAVS-----STDPKTDPVGAFVGMRGSRVKNIIRELNDEKIDIVNYSPVTTEL 284
304373277 329 IINALSPARVVYIeevKKSKGQ-KFLVVVPTSHQAKAIGKNAINVRLANELTRTKIDIKSykdyiSEgktithwnaNVEN 407
166155193 285 LQNLLYPVEIQKI---AILEDDkVIAIIVQDSDYATVIGKRGINARLISQILGYELEVQR-----MS---------EYNK 347
15618236  285 LQNLLYPIEIQKI---AILEDDkVIAIVVNDADYATVIGKRGINARLISHILDYELEVQR-----MS---------EYNK 347
15835851  285 LQNLLYPIEIQKI---AILEDDkVIAIVVNDADYATVIGKRGINARLISHILDYELEVQR-----MS---------EYNK 347
16752722  285 LQNLLYPIEIQKI---AILEDDkVIAIVVNDADYATVIGKRGINARLISHILDYELEVQR-----MS---------EYNK 347
29840227  285 LQNLLCPIEIQKI---AILEDDkVIAIVVHDADYATVIGKRGINARLISQILDYELEVQR-----MS---------EYNK 347
33241661  285 LQNLLYPIEIQKI---AILEDDkVIAIVVNDADYATVIGKRGINARLISHILDYELEVQR-----MS---------EYNK 347
297621094 285 LQNALSPIEIRKI---SISEDDrVISIVIDDDDYAAVIGKKGMNARLNSRLIGYELEVQR-----MT------------- 343
62185081  285 LQNLLCPIEIQKI---AVLEDDkVIAIVVQDADYATVIGQRGINARLISQILDYELEVQR-----MS---------EYNK 347
89898348  285 LQNLLCPIEIQKI---AILEDDkVIAIVVHDADYATVIGKRGINARLISQILDYELEVQR-----MS---------EYNK 347
304373277 408 QHeleqiekassvpykttehknhRYtrksfSNTNIM----AEFekDIEKYIEDLQ----------NERLLYEDEEEFEEP 473
166155193 348 LL---------------------EI---------------QRL--------------------------------QLAEF 359
15618236  348 LL---------------------EI---------------QRL--------------------------------QLAEF 359
15835851  348 LL---------------------EI---------------QRL--------------------------------QLAEF 359
16752722  348 LL---------------------EI---------------QRL--------------------------------QLAEF 359
29840227  348 LL---------------------EI---------------QRL--------------------------------QLAEF 359
33241661  348 LL---------------------EI---------------QRL--------------------------------QLAEF 359
297621094 344 ------------------------------DYNKTMaiqrTELaeSDDPTLDHPLtgiegvnklvFEHLVAEGFNTPRTL 393
62185081  348 LL---------------------EI---------------QRL--------------------------------QLAEF 359
89898348  348 LL---------------------EI---------------QRL--------------------------------QLAEF 359
304373277 474 TSLDVKDLVeQA---NEEFVENISTKETALEKQAKPEikksVDLTKeeIKQIKKEAKFFKKDNdllsYSGIKDLDLDDLT 550
166155193 360 EDPRLDQPL-EVegiNTLIVQNLEHAGYDTIRKILLAs--aSELAS--VPGISLELAYKILEQ----VSKYGEGKVDEKP 430
15618236  360 DSPHLDQPL-EMegiSKLVIQNLEHAGYDTIRRVLLAs--aNDLAS--VPGISLELAYKILEQ----VSKYGESKVDEKP 430
15835851  360 DSPHLDQPL-EMegiSKLVIQNLEHAGYDTIRRVLLAs--aNDLAS--VPGISLELAYKILEQ----VSKYGESKVDEKP 430
16752722  360 DSPHLDQPL-EMegiSKLVIQNLEHAGYDTIRRVLLAs--aNDLAS--VPGISLELAYKILEQ----VSKYGESKVDEKP 430
29840227  360 DNPQLDEPL-DMegiSKLVVQNLVHAGYDTIRKVLLAs--aNDLAS--VPGISLELAYKILEQ----VSKYGEGKVDEKP 430
33241661  360 DSPHLDQPL-EMegiSKLVIQNLEHAGYDTIRRVLLAs--aNDLAS--VPGISLELAYKILEQ----VSKYGESKVDEKP 430
297621094 394 LLASPEQLS-NAasiSLEMADHILEQVRKQRL------------------------------------------------ 424
62185081  360 DSPLLDEPL-EMegiSKLVVQNLVHAGYDTIRKVLLAs--aNDLAS--VPGISLELAYKILEQ----VSKYGEGKVDEKP 430
89898348  360 DNPQLDEPL-DMegiSKLVVQNLVHAGYDTIRKVLLAs--aNDLAS--VPGISLELAYKILEQ----VSKYGEGKVDEKP 430
304373277 551 WDE 553
166155193 431 QVE 433
15618236  431 EIE 433
15835851  431 EIE 433
16752722  431 EIE 433
29840227  431 KIE 433
33241661  431 EIE 433
297621094     ---    
62185081  431 KIE 433
89898348  431 KIE 433
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