Conserved Protein Domain Family
Pgu1

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COG5434: Pgu1 (this model, PSSM-Id:227721 is obsolete and has been replaced by 444185)
Polygalacturonase [Carbohydrate transport and metabolism]
Statistics
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PSSM-Id: 227721
Aligned: 12 rows
Threshold Bit Score: 207.727
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
15901662  51 SSNAITNDLDNsPTVNQNRSAEMIASNSTTNGLDNSLSVNSISSNgtir----------------------------sns 102 Streptococcus pneum...
15890201   2 VATPEVAAIGYvTTSGKMRSPNSLISSILLAALALAFSGLSFAGKpaaqgvqeqgs-------------qpdprqfgfpi 68  Agrobacterium tumef...
15891800   1 MNEPLIIALSArTAALCLAAPDARYHLPAQTAWHLSSPDGDGQHGeat-----------------------------tvv 51  Agrobacterium tumef...
15890426     --------------------------------------------------------------------------------     Agrobacterium tumef...
15893646   1 MNFNLVTATST-SASFEIENNKCFYLESTADVYMNNERILTTDKNv---------------------------------- 45  Clostridium acetobu...
15896916  42 VIVPDLGYSDS-SITLIWDKPTDYSKVVSYDVYVN----NSLAANtkkln-------------------------ytvtn 91  Clostridium acetobu...
16124826     --------------------------------------------------------------------------------     Caulobacter crescen...
17546475  73 PCVPALAYDDT-SITLAWNKPDIYADVADYNVYMNGTKLGSASENnavhsvakryidrfyaedtagfhtrmtfhsfrvtg 151 Ralstonia solanacearum
17549054  48 GGDGGSSATAA-TASPADATATVTTRDAIWGESGAATRIVASLQG----------------------------------- 91  Ralstonia solanacearum
20138914   1 -------------------------MILSHRYTLIALAAAILSSG----------------------------------- 20  Ralstonia solanacearum
15643203     --------------------------------------------------------------------------------     Thermotoga maritima
1172463      --------------------------------------------------------------------------------     baker's yeast
15901662 103 QLDNRTVESTVTSTNENKSYKEDVISDRIIKKEFEDTALSVKDYGAVGD------GIHDDRQAIQDAIDAAAQg---LGG 173 Streptococcus pneum...
15890201  69 PVPEPRLPDDADAFNPPWMEVGGKGPAIAEISRTAGAGEVVSMTGVDLDgrtgfeVFSQFPGAAQGVVTPLAPltadATA 148 Agrobacterium tumef...
15891800  52 TLLHDLRPDTRYVFEAEGFGSLEFR-TAPCAGLVEATAFSLRPDIALDDe----eGARANATALENAVAAVP------AG 120 Agrobacterium tumef...
15890426   1 -----------------------------------MTIMNTSQDITVAA------GGLDATAAIQQAIDAVSS----AGG 35  Agrobacterium tumef...
15893646  46 FTLNNLTPGTEYSIFIEDTESKAKSPVISIKTKLESAVVNILDFGAVGD------GNHVNTAFIQAAIQVCP------AF 113 Clostridium acetobu...
15896916  92 LKPNTAYSFKVRAKYSDSTESEDSS-VITQSTTPTSQIFDVTKYGAVGD------GKTLNTDKIQAAINACT------DG 158 Clostridium acetobu...
16124826   1 ---MLHLPPHRRQLLGGLLALGVGASASRTHAAPTEAVANVRDFGAKGD------GVTIDSPAIDRAIAYAAE----RGG 67  Caulobacter crescen...
17546475 152 LAPDTAYTFTIRSVDRSGKESADSVPVVHRTAAAFTRVYDVAKLGARGD------GATLNTAVIQKAIDDCAGtsttAYG 225 Ralstonia solanacearum
17549054  92 -VAQSMFPRRDFVVTDYGAQPCAIVDAVNPYTDASKSPLSAGADKTPAT------GAFDARAAFTAAIAACNa----AGG 160 Ralstonia solanacearum
20138914  21 AHAAGASVTASWGNVAEPSLPADSA--VCKTLAATITPVSGSIDTVDGNp----sNSQPDASRIQTAIDNCP------AG 88  Ralstonia solanacearum
15643203   1 ---------MIMEELAKKIEEEILN--HVREPQIPDREVNLLDFGARGD------GRTDCSESFKRAIEELSK----QGG 59  Thermotoga maritima
1172463    1 ----------------------MIS--ANSLLISTLCAFAIATPLSKRDs----cTLTGSSLSSLSTVKKCSS----IVI 48  baker's yeast
15901662 174 GNVYFP---EG--TYl---VKEIVFLKSHTHLELNEKATILNGINIKNHPSivfm---------tglFTDDGAQVEWGPT 236 Streptococcus pneum...
15890201 149 ATLLLPatlPSwsTYlirpLRGDLEGRSFAINRTESWWIGPDAAAPGAIVSvy------------grNLSRFNGTSQSYL 216 Agrobacterium tumef...
15891800 121 GTLRLG---PG--VW----TAFPVRLKSDMTLHLAEGAVLRAPSVRNRWP-------------------------ILP-- 164 Agrobacterium tumef...
15890426  36 GRVSLS---AG--RH----VSAGLHLKSGVELHLAEDAVLAPVSDYDAYAL------------------------TRVSV 82  Agrobacterium tumef...
15893646 114 GRVIIP---KG--TY----LTGPLFLKSNITLELEEGSVLLGLKEREHYP------------------I------LKANI 160 Clostridium acetobu...
15896916 159 GTVVIP---QG--TF----LSGAIYLKSNMSLRI-DG-TLLGSDNVNDYa-----------------FT----SKRFP-- 204 Clostridium acetobu...
16124826  68 GTVLVP---AG--TY----ACYTIHLKSRIRLYLDQGATILAASTPIEGME------------------------SGGYD 114 Caulobacter crescen...
17546475 226 CKVLIPaddAGgaVF----VSGALFLRSNMTLEVAEGATLRGSADAADYPLakgyq-------lysyFTNVTDDRRPPSL 294 Ralstonia solanacearum
17549054 161 GRVLVP---AGn-WY----CAGPIVLLSNVNFHLSADCTIYFSPNPDDYAKdgpvdcgangklyysrWQSNDCLNYGAPV 232 Ralstonia solanacearum
20138914  89 QAVRLVkgsAGesGF----LSGSLKLKSGVTLWIDTGVTLFASRNPADFDNgvgt---------cgtATTSNTKSCNALI 155 Ralstonia solanacearum
15643203  60 GRLIVP---EG--VF----LTGPIHLKSNIELHV-KG-TIKFIPDPERYLPvvl-----------trFEGIELYNYSPLV 117 Thermotoga maritima
1172463   49 KDLTVP---AG--------QTLDLTGLSSGTTVTFEG---TTTFQYKEWS------------------------------ 84  baker's yeast
15901662 237 EDISYSGGTIDMNGa----------lNEEGtKAKNLPLINSSGAFAIGNSNNVTIknvtfkDSyqg----------haiQ 296 Streptococcus pneum...
15890201 217 YVKPAGAAGWYVKAi-----------SVNPfKVDFKVLALPPARYEVWVHNTHGGrf--gwSGpltldvlsqspwaaqdK 283 Agrobacterium tumef...
15891800 165 ARDEAGRMLGSWEG------------LPDAcFAAPVHAIGADNLV-IEGRGILDG------SG----------------- 208 Agrobacterium tumef...
15890426  83 IAEDSDRGMIIANG-------------------ASNIAVTGPGRIEAGGENFIIG------------------------- 118 Agrobacterium tumef...
15893646 161 SMTNRDFYLGSWEGn-----------EADC-FASLITAINVENVN-IIGKGTIDG------NS----------------D 205 Clostridium acetobu...
15896916 205 YYTTS-NYMG----------------LIN---AYTTNYGSISNVK-IYGNGTVSG------GT----------------Y 241 Clostridium acetobu...
16124826 115 HAEPMDPAYSSYQD------------FGHShWRNSLIHGEGLNDIVIEGPGLIWG------KG----------------L 160 Caulobacter crescen...
17546475 295 LNTLSPAHMNGATA------------LADH-QGYDDRRGVFSNIR-VTGKGTLDGsgwvrrGTdtidev----gnrlasF 356 Ralstonia solanacearum
17549054 233 YARNQRNIALTGEGdsstlngqamtpFAGS-GNTSTCWWTFKGTKGEYGAVNASTpsqaysNPnnvdlrtaapgiaddlY 311 Ralstonia solanacearum
20138914 156 VARDTVGSGIVGDG------------IIDGrGGSLVTSGPNANRLTWWDIAYLNKtk--glNQ----------------- 204 Ralstonia solanacearum
15643203 118 YALDCENVAITGSG------------VLDG-SADNEHWWPWKGKK-DFGWKEGLP------NQqe-------------dV 164 Thermotoga maritima
1172463   85 --------------------------------GPLISISGSKISVVGASGHTIDG------Q------------------ 108 baker's yeast
15901662 297 IAGSKnvlv------dnsRFLGQAlp----ktMKDGQIISkesiqiEPltrkgfPYALNDDGKKSENVTIQNSYFGKSDK 366 Streptococcus pneum...
15890201 284 KRIDAr------------QFGAKGdgvtddtaAILRAIDAaaatapATlyfpagIYLVTAPLVAPANVAWFGEGMNKTEI 351 Agrobacterium tumef...
15891800 209 DKGD--------------WWSWPK----------ETREGA--------------RRPRGLHLVSCHKTQLLGFTIRNAAS 250 Agrobacterium tumef...
15890426 119 ------------------DDAAMG-----------TYVPAk-------------KRPRVMVLEACRNVRLENLNVSASPM 156 Agrobacterium tumef...
15893646 206 FDTW--------------WF-KAK----------EKRIAW---------------RPRTLFLNACKNILVEGVTIKNSPS 245 Clostridium acetobu...
15896916 242 TSG---------------KLTKLG--------QAQTNLKGd-----KA-------RGDLITAKGVTGLYLGGVNIVNPSE 286 Clostridium acetobu...
16124826 161 GRGH--------------DYDKDMp---------ISGKPG--------------VGDKSIALKNCRNVLLRDFKVLQGGW 203 Caulobacter crescen...
17546475 357 APGNAs------------KWSTLGvlakrqmlAAQAEAGGtldstqNAnyy-snRRSSLATFRGTRNLYFGDLTLTNPAL 423 Ralstonia solanacearum
17549054 312 ARLTDpttpwqqdqnylsALSEAGv-------AVAQRIFG------KGh----yLRPCMVEFIGCTNVLMEAYRTHATPC 374 Ralstonia solanacearum
20138914 205 QNPRLv-----------qLYNGSA--------FTLYRVTVq------------nSPNFHIVTTGTAGVTAWGIKIVTPSL 253 Ralstonia solanacearum
15643203 165 KKLK--------------EMAERGt-------PVEERVFG------KGh----yLRPSFVQFYRCRNVLVEGVKIINSPM 213 Thermotoga maritima
1172463  109 --GAK-------------WWDGLG------------DSGK--------------VKPKFVKLALTGTSKVTGLNIKNAPH 147 baker's yeast
15901662 367 sgelvtaIGTHYQTLSTQNPSNIKIQNNHFDn---mMYAGVRFTGFTDVLIKGNRFDKkv----kGESVHYRESGAALVN 439 Streptococcus pneum...
15890201 352 rlnrridQSMVVVDGDDTRFENLTLNANRNIa----GKPLLALRSTKNTRLDSVRVDAwgvpafdAQDTERLFVHASELI 427 Agrobacterium tumef...
15891800 251 -------WTIHPQGCEDLTAAGLTIIAPHDSp----NTDGFNPESCRNVMISGVRFSV-------GDDCIAVKAGKRGPD 312 Agrobacterium tumef...
15890426 157 -------WTLHMVNCEDLHFRNLRIENDRRLp----NTDGIVLDACRRALIEDCFIST-------ADDGICLKTSAGPDG 218 Agrobacterium tumef...
15893646 246 -------WTIHPLMSDHLKFINLSIENPFNAp----NTDALDPESCKNVLILGDTFSV-------GDDCIAIKSGKIDIS 307 Clostridium acetobu...
15896916 287 -------HSIFISYSKNVTVDGISVKTYGIH-----NADGIDIANTSVANIFNSYFDN-------GDDCINLNAGYGADA 347 Clostridium acetobu...
16124826 204 -------FALLATGVDNLTIDNLLIDTNRD---------GLDIDCCRNVRITRCTINSp------WDDAICPKSSYALG- 260 Caulobacter crescen...
17546475 424 -------HGVMFIESDNMVFANTVTQTFDIN-----NADGVEFGNSSNAVVFNNFIDS-------GDDNINFAAGQGKN- 483 Ralstonia solanacearum
17549054 375 -------WQHHPTDCANVVIRGVTVDSIGP------NNDGFDPDACSNVLCEDMTFNT-------GDDCIAIKSGKNLD- 433 Ralstonia solanacearum
20138914 254 a------YTVPGYKCAAGTTPDKVTPATCFTpetvkNTDGFDPGQSTNVVLANSYIST-------GDDHVAIKASGGAT- 319 Ralstonia solanacearum
15643203 214 -------WCVHPVLSENVIIRNIEISSTGP------NNDGIDPESCKYMLIEKCRFDT-------GDDSVVIKSGRDADG 273 Thermotoga maritima
1172463  148 -------QVFSINKCSDLTISDITIDIRDGDsagghNTDGFDVGSSSNVLIQGCTVYN-------QDDCIAVNSGSTIK- 212 baker's yeast
15901662 440 aysykntKDLLDLNKQVVIAENIFNiad---------------pktKAIRVAKDSAEYLGKVSDITVTKNVINNnskete 504 Streptococcus pneum...
15890201 428 e-----nGSFYGASRQVFFSDNRFSm--------------------TGYGESVVALWGGRDFAMTGNELVNADEs----- 477 Agrobacterium tumef...
15891800 313 g-----eDDHLAETRGISVRHCLMQ---------------------RGHGGLVIGSEMSGGVHDVTVEDCDMIG------ 360 Agrobacterium tumef...
15890426 219 --------KAVGVCADITVRGCTVS---------------------SMSCALKLGTESFGDFTNVVFEDCKVVQ------ 263 Agrobacterium tumef...
15893646 308 -------KKNPVSSENINIRNCNMR---------------------SGHGAVVLGSEMSSGLKSIFIEKCIFNA------ 353 Clostridium acetobu...
15896916 348 -------VKENIPDNNIRIFNSNTG---------------------RGHGGVVFGSYTGAWIQNVSVEDCDFNG------ 393 Clostridium acetobu...
16124826 261 ---------YPRVTENLTISDCYVAgryrigsvldgtwqvfmpapkGTHGRIKLGTESNGGFKNFTITNCVFDK------ 325 Caulobacter crescen...
17546475 484 -------YEGGTPQQYAWIFNNYMR---------------------EGHGGVVAGSHTGAWIQDILAEDNVMFM------ 529 Ralstonia solanacearum
17549054 434 --------TGYGPAQDHVIRNCIMN---------------------SGHGGITLGSEMGGGVQRIYARNLTMRNafya-t 483 Ralstonia solanacearum
20138914 320 --------------RNLLFAHNHFY---------------------YGHGLSIG-SETDGGVSNMQVTDLAMDGnd---- 359 Ralstonia solanacearum
15643203 274 -------RRIGVPSEYILVRDNLVIs-------------------qASHGGLVIGSEMSGGVRNVVARNNVYMN------ 321 Thermotoga maritima
1172463  213 ----------------FMNNYCYNG---------------------HGISVGSVGGRSDNTVNGFWAENNHVIN------ 249 baker's yeast
15901662 505 qpNIELLRVSDNLVVSensifGGKEGIVIEDSKGKITVlnnqfynlsgkyisfiksnanGKEPVIRDsDGNFNIVTENGL 584 Streptococcus pneum...
15890201 478 --RDDGHGIGRFFVAQah--fGSMRNLYFEKNISRNAAph-----------------dcTKVDCNKGeQICFEIVGSKLK 536 Agrobacterium tumef...
15891800 361 --TDRGLRLKTRRGRG-----GMVGNITMRRVLLDGVQ---------------------TALSAN-----AHYHCDADGH 407 Agrobacterium tumef...
15890426 264 --SNRGIGLFSRDGGAmr--nIRFSRIETECHETPGGFwgs---------------geaVTVTVVDR-RPERQAGRVENL 323 Agrobacterium tumef...
15893646 354 --TDRGLRIKTRRGRGs---kGIIDNIHMKNIKMDKVL---------------------TPFSIN-----SFYFCDDDGK 402 Clostridium acetobu...
15896916 394 --TNIGLRFKTSKEIG-----GGARNITVRDVTMENI----------------------VNDAIS------FDSNY-G-- 435 Clostridium acetobu...
16124826 326 ---CRGIALETVDGGAle--dITITNITMHGGTTAPIFmrlgkrmr-----gpegrpigTLKRILIS-NITSSAGDRMPS 394 Caulobacter crescen...
17546475 530 --TDNGLRLKSTPATG-----GGARRIVFRDTAMREVG---------------------TKNSVSAG-GQTFANNTNGSP 580 Ralstonia solanacearum
17549054 484 dpLNIAIRIKTNMNRG-----GYVRDFYVDDVTLPNGVsltgggygsg-llagspinssVPLGVATA-ASANPSASRGGL 556 Ralstonia solanacearum
20138914 360 ssGGNGLRIKSDISRG-----GKVNNIVYNGICMRNVK---------------------EPLVFDP----FYSTAKGSLY 409 Ralstonia solanacearum
15643203 322 --VERALRLKTNSRRG-----GYMENIFFIDNVAVNV----------------------SEEVIR-------INLR---- 361 Thermotoga maritima
1172463  250 --SDNGLRIKTVEGAT-----GTVTNVNFISNKISGIK----------------------SYGIV--------IEG---- 288 baker's yeast
15901662 585 YKIVTNNLSDKNEKEKNKEEKQSNSNNVIDSNQKNGEFNSSK----DNRQMNDKIDNKQDNKTEEVnYKIVGDGRETENH 660 Streptococcus pneum...
15890201 537 NDFVRASSNSVTFKSLSDLGDATPGGFDLVIVGGRGAGQHRHiastDGSFVLLEQAWNVVPDRTSRfALAATASRAVIYD 616 Agrobacterium tumef...
15891800 408 DDWVQSRNPAPVNDGTPFVDGITVEDVEIRNLAHAAGVFLGL----PEAPIRN-----------IV-VRNLTIVSHDPSA 471 Agrobacterium tumef...
15890426 324 VVEDLGGSMEGAINLVSTSKAGIHNVRLERITLAQQPGKLGTglqyDLRPTNADIAPSAEAAGRANaWTQDAEGRIVGME 403 Agrobacterium tumef...
15893646 403 TEYVWSKEKLPVDDKTPYIGSIYVEDVTCTNAHVCAAFMYGL----PEQKIEK------------V-SMKNVSVSFDENA 465 Clostridium acetobu...
15896916 436 --LT-------DVDNPAPVPGYFHDVTLSNIMCKKAG-GYG-------IWVN-------AL--PSQ-YNANLSLNNITLN 488 Clostridium acetobu...
16124826 395 IIAGLNGHPVEDIKISQCFLEQVGGGDAAMAALRPPENEAGY----PEPNMFGDLPATGFFVRHARnVELDGIEVRTLTP 470 Caulobacter crescen...
17546475 581 FILTLSYSAGSNVFDNAAAAAQFRDITVNRVTIDNGNPGTGG----AMISVDGYDGTDPSLGYPET-FHENVLFDTVSIT 655 Ralstonia solanacearum
17549054 557 ITFDCDYQPSKDAIRTRPAQVQNIHISNVRASNATVGGTTGS----CFQAIVAQGPVAFDYNGPTP-APTVPPIAGVTIT 631 Ralstonia solanacearum
20138914 410 PNFTNIVVKNFHDLGSAKGIARTMTFLGYEAKKRTNPLTLTL----DNVVFDG--TQPAFDVAHNG-GPASPNGTHFTFG 482 Ralstonia solanacearum
15643203 362 ------------YDNEEGEYLPVVRSVFVKNLKATGG-KYA-------VRIEG--------------LENDYVKDILISD 407 Thermotoga maritima
1172463  289 ------------DYLNSKTTGTATGGVPISNLVMKDI--TG--------SVN---------------STAKRVKILVKNA 331 baker's yeast
15901662 661 INKSKEIVDVKQKLPKTGSNKIMELFLTVTGIGLLLTLKGLKYYGKDK 708 Streptococcus pneumoniae TIGR4
15890201 617 NTLDGRESYAEHDSDSTGVLLYGNVYDVVVDSNRISRMRHGMMTVALD 664 Agrobacterium tumefaciens str. C58 (Cereon)
15891800 472 VATPPIMADRVRPMRHEAIVFEQADVVCDDPALLNDAPVSISSYFD-- 517 Agrobacterium tumefaciens str. C58 (Cereon)
15890426 404 DYPGGMPAIYLSGVHRFSADNVAIKRAMPLPEGWNIKEIVATTGSDEG 451 Agrobacterium tumefaciens str. C58 (Cereon)
15893646 466 KEDYADMMSFLEPMKRNGMYFNNIKD--LVLENVTVEKALNEEITKLN 511 Clostridium acetobutylicum
15896916 489 YCKKGASINYLQDSTFTGVKFVNSGN--TPWASSNTTNVKYINCTPQP 534 Clostridium acetobutylicum
16124826 471 DARPAVWMQNVDGARLSRLQLPPSKSSFHLEGVRDFELRTSSPVRDKR 518 Caulobacter crescentus CB15
17546475 656 RAKP-ASISRLKDSTFKDVTITNWGTAATPWSIRDASGLTFSNVKPAP 702 Ralstonia solanacearum
17549054 632 DCDFGSPVAAGPASASTPGPIYAYNVSDITLTNVRIGAQIYNTTVSDT 679 Ralstonia solanacearum
20138914 483 GNGPVSFANAIVTSSTTDVTVTGTPG-TAAAVDCSNAFVPLKSVAPTS 529 Ralstonia solanacearum
15643203 408 TIIEGAKISVLLEFGQLGMENVIMNG--SRFEKLYIEGKALLK----- 448 Thermotoga maritima
1172463  332 TNWQWSGVSITGGSSYSGCSGIPSGS----GASC-------------- 361 baker's yeast
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