Conserved Protein Domain Family
AraH

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COG1172: AraH (this model, PSSM-Id:224093 is obsolete and has been replaced by 440785)
Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component [Carbohydrate transport and metabolism]
Statistics
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PSSM-Id: 224093
Aligned: 175 rows
Threshold Bit Score: 99.1466
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
16265127   1 MNFLKalsRTKLYWGLIAIFLIGVLSSPLTSSgrNIFLSSGN----LLDVLRQVSA-TGLIATGMTAVILTG-GIDLSVG 74  Sinorhizobium meliloti
15832666  17 KQFVS---HHINEIGLLVVIAILYLVFSLNAP---GFISLNN----QMNVLRDAAT-IGIAAWAMTLIIISG-EIDVSVG 84  Escherichia coli O1...
19705201   1 ------mvAVMFPLSGLSGDYLIREMIQRISR--NLFLIMSLlipiVAGMGLNFGIvLGAMGGQLALILITNwHIMGLQG 72  Fusobacterium nucle...
15603115  20 DGFAAwfsQMLTRYGLLWLCFLLVIIFSLTT---DSFASMLT----LNAILESKSK-IALLALAATTTMIVG-KIDLNVG 90  Pasteurella multocida
16265281   1 -----------------MLLAGMVLYFSLVTG---GFASPQS----AVFILQSVSI-TGILALGVTATLVVG-GFDLSIG 54  Sinorhizobium meliloti
16121578  17 KLNGQamlGWVLHHIVWIWLIALVVIFGVFN---EFFLTISN----LQNVMVQATV-LGTLGLAVALPLLVA-EIDLSIP 87  Yersinia pestis
16121826  11 QPWRHqlfDFLYKWGMLLTVVALIALFGLAS---DNFLDPNN----IINILRSIAI-VTVIAIGVSISLSIG-GFDLSVG 81  Yersinia pestis
15803071  17 KQFVS---HHINEIGLLVVIAILYLVFSLNAP---GFISLNN----QMNVLRDAAT-IGIAAWAMTLIIISG-EIDVSVG 84  Escherichia coli O1...
13477065   9 NPRTRqtlEFVLDNLVWFMLVFVLVVFSIFI---PNYFQLGI----FANIIEASSV-LGVMSIGLALVIIAG-HMDLSVE 79  Mesorhizobium loti
13476071   1 -MTLR---DHTIRYGFIVLLFGLVAYFAIAAD---GFVSPQS----AVFIFQSVAI-TGVLALGVTATLVVG-GFDLSIG 67  Mesorhizobium loti
16265127  75 SLMAICTVVCAMLLTVPgdtaalylglpavglavlvvgaaavrfvflnieksragvthirdiqldrtrgtvlpaaagivl 154 Sinorhizobium meliloti
15832666  85 PMVAFVSVCLAFll------------------------------------------------------------------ 98  Escherichia coli O1...
19705201  73 IFLAMILSIPFSILLG---------------------------------------------------------------- 88  Fusobacterium nucle...
15603115  91 FGIVLWHILAITLQVQFg-------------------------------------------------------------- 108 Pasteurella multocida
16265281  55 SVATTAMMASSYVMVV---------------------------------------------------------------- 70  Sinorhizobium meliloti
16121578  88 ANAGFSAAVGAMAYAELg-------------------------------------------------------------- 105 Yersinia pestis
16121826  82 STASLANAVVVSLFVWY--------------------------------------------------------------- 98  Yersinia pestis
15803071  85 PMVAFVSVCLAFll------------------------------------------------------------------ 98  Escherichia coli O1...
13477065  80 SVAALSAMAVGILFCSSgiglg---------------------------------------------------------- 101 Mesorhizobium loti
13476071  68 SVATSAMMAAAYVMVV---------------------------------------------------------------- 83  Mesorhizobium loti
16265127 155 calvlsfllpqmqTKFGVLGVLLVAPAVGLMFGAVNGVIIVVGRLQPFIVTLAMMVTALGIARLTagQNNAVLPvyt--- 231 Sinorhizobium meliloti
15832666  99 ------------qFEVPLAIACLLVLLLGALMGTLAGVLRGVFNVPSFVATLGLWSALRGMGLFm--TNAlpvp------ 158 Escherichia coli O1...
19705201  89 ---------------YIGGVILNRAKGKEMITSMILGYFINGAYQLVVLYSMGKIFPVKDKTLLL--SSGRGIKnt---- 147 Fusobacterium nucle...
15603115 109 ---------------FSWQMATVTVLIVAAIYGLLNGILVALADIDSFVATLGSGTVLYAIALWH--SGGRQIVg----- 166 Pasteurella multocida
16265281  71 -------------MGGGALTAALVCLAVGALVGLINGFIIVYMRVPDLLATLGMMFLLLGLQRIP--TEGRSIAagmtlp 135 Sinorhizobium meliloti
16121578 106 ---------------LPWPIAALIGLLVGTFIGFFNGVCITRLKMVSLIETLAMMIIIQGALLAL--TQGKTLTn----- 163 Yersinia pestis
16121826  99 --------------GFGTTGAIILTLLICTLVGLFNAFLIVVLKIPDMLATLASLFVIQGVAMTY--SRGGSITqs---- 158 Yersinia pestis
15803071  99 ------------qFEVPLAIACLLVLLLGALMGTLAGVLRGVFNVPSFVATLGLWSALRGMGLFm--TNAlpvp------ 158 Escherichia coli O1...
13477065 102 --------vqlhpEWLMVPVSLLLALTVGGLIGAFNGFLVVRVKMSAFIITLASYIWVRGLVLVI--SGGRSAQd----- 166 Mesorhizobium loti
13476071  84 -------------LEQNAVVAVVVCLLIGAIVGLINGWLIVYMRVPDLLATLGMMFLLVGLQRIP--TEGRSIAtgmtmp 148 Mesorhizobium loti
16265127 232 -----gsnATADFDMLRQ-----LVFGi-VPMPGIFFIVAILLYGAVLRFTPFGRYVYAIGGNEEAARLSGINAGRVKIV 300 Sinorhizobium meliloti
15832666 159 ------ideNEVLDWLGGqfl-------gvPVSALIMMVLFALFVFISRKTAFGRSVFAVGGNATAAQLCGINVRRVRIL 225 Escherichia coli O1...
19705201 148 ------vdLTEVAKSIDNai-plRIFRydIPVLTILFIIALCFFVIWFRKTKLGQDMRAVGQDMEVSKSAGIEVNKVRIY 220 Fusobacterium nucle...
15603115 167 -------dLPDGFIAINSt----EIFG--IPISAFYVLIIAIVMWLVTEHTPTGRCMYAVGGNPTAAHLNGISIKKYTIV 233 Pasteurella multocida
16265281 136 dgsvatgtFSPAFLALGRhr-fdLVLPnlVPVSVVVLVVLAIAIWFFLEYTRFGRIMYAVGSNERAAALAGAPVNAYKIS 214 Sinorhizobium meliloti
16121578 164 --------LSEGYIWIGQa----TIGG--WPLMPVVFLLVLAVMGAVLKYTVLGRSIYAVGGNPVASNSAGIRVARVKII 229 Yersinia pestis
16121826 159 ------mlLPSGDMAEGVipeifSALGq-VPVIVLIMLAVTVVVQLYLSLTKHGRRMYAIGGNPQAARLAGIRTVRYRVL 231 Yersinia pestis
15803071 159 ------ideNEVLDWLGGqfl-------gvPVSALIMMVLFALFVFISRKTAFGRSVFAVGGNATAAQLCGINVRRVRIL 225 Escherichia coli O1...
13477065 167 --------LAPAIRWFGIq----RLIG--LPLTAWIAIACFVVFSLIMAKTPFGRHLVMIGGNETATFRAGIRVNRNLII 232 Mesorhizobium loti
13476071 149 dgsvangkFGGAFLALGRhr-fdFFIPnlIPVSVVVLLVLAVLIWFFLEYTRFGRMMYAVGSNERAAELAGAPVKAYKIW 227 Mesorhizobium loti
16265127 301 TYAVSGLLAGIAAVLYVAQYRQGKPDAG-AGLELDAIAAVVIGGTSLMGGRGSLAGTFCGVLIFGLLSNILQLHN----- 374 Sinorhizobium meliloti
15832666 226 IFTLSGLLAAVTGILLAARLGSGNAGAA-NGLEFDVIAAVVVGGTALSGGRGSLFGTLLGVLVITLIGNGLVLLG----- 299 Escherichia coli O1...
19705201 221 AIVISTVLAGIGQVIYLQNLGTINTYNShEQIGMFSVAALLIGGASVARATIPNAISGVILFHTMFVVAPRAGKElmgsa 300 Fusobacterium nucle...
15603115 234 PFIVSSLITGFTGVLIAAQQGVGQASVG-MDYLLPALVGAFLGSTTIKPGRINVWGTVVGIAILAIGISGIQQFG----- 307 Pasteurella multocida
16265281 215 AYVISGVFASIGGILLAARLGRGDIASG-NNLLLDAVAAALIGFAVLGAAKPNAFGTAVGALFVGILLQGLTMMN----- 288 Sinorhizobium meliloti
16121578 230 AYTISGFLAALAGFLLASWQMAITSNQG-SSYLLYAIAAPIIGGVSVFGGHGNVKGVLGGVLLLTVIQVGLAIVN----- 303 Yersinia pestis
16121826 232 AYVLSAQLAALGGILLASRIGSSQVNAG-SGYLMDAVAAAYIGFSLAGSGKPNAFGTLIGAIILGVLQNGLVMLS----- 305 Yersinia pestis
15803071 226 IFTLSGLLAAVTGILLAARLGSGNAGAA-NGLEFDVIAAVVVGGTALSGGRGSLFGTLLGVLVITLIGNGLVLLG----- 299 Escherichia coli O1...
13477065 233 AFVLAGAIAGLAGWLLAIRTSGATANLG-VGLLFNAFAAVVIGGVSLKGGVGTLPGVYAGVLLLSAINTAINLMG----- 306 Mesorhizobium loti
13476071 228 AYVISGVFASIGGILLAARLGRGDIASG-NNLLLDAVAAALIGYAVLGAAKPNAFGTAVGALFVGILLQGLTMMN----- 301 Mesorhizobium loti
16265127 375 -INSNLQLVLKGVIIIGTVLVQERNAYdllaQLRLP 409 Sinorhizobium meliloti
15832666 300 -INSFFQQVVRGVIIVVAVLANILLTQ----RSSKA 330 Escherichia coli O157:H7
19705201 301 qIGEYFRVFISYGIIALVLIIYEWRRKkekeREREK 336 Fusobacterium nucleatum subsp. nucleatum ATCC 25586
15603115 308 -GAFWVEPLFNGATLLLSITIAGYAQRkrllNQKAV 342 Pasteurella multocida
16265281 289 -APYYTQDFIKGAVLVVALIFTFALSK----RGKR- 318 Sinorhizobium meliloti
16121578 304 -VPSFYVGMIGGVIIFIAVAIDAFRIR----YFG-- 332 Yersinia pestis
16121826 306 -VPYYAMDIIKGLVLAMALALTYIQKR--------- 331 Yersinia pestis
15803071 300 -INSFFQQVVRGVIIVVAVLANILLTQ----RSSKA 330 Escherichia coli O157:H7 EDL933
13477065 307 -LPANFTQVIHGLLVLAAVLLDAFKQTi---RQRLA 338 Mesorhizobium loti
13476071 302 -APYYTQDFVKGVVLVVALVFTFALSG----RGRG- 331 Mesorhizobium loti
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