Conserved Protein Domain Family
YndJ

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pfam14158: YndJ 
YndJ-like protein
The YndJ-like protein family includes the B. subtilis YndJ protein, which is functionally uncharacterized. This family is found in bacteria and archaea, and is typically between 222 and 269 amino acids in length. There are two completely conserved G residues that may be functionally important.
Statistics
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PSSM-Id: 404946
Aligned: 17 rows
Threshold Bit Score: 130.91
Created: 25-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
jgi:Hoch_5603  56 RLSALGALVSAPLCLQLAGagaarDTPLAgaRWFRvaayTQPIGAAFALWATVLEPGP-LAGVLAGAWLLAACAPAGFAA 134
Q5UZ60         52 RALALAPLVLVPLALRTAVsg-afEAPVS--RLTTtaiwLQPVGALLFAVSLVIPSPAlLAAALATPWLAVTGLLGLAAF 128 Haloarcula mar...
WP_014641600   30 LVLGFAFLVLVPLLLEEAVqsaegSRPEK--WLWNvmscSLPFSAA-GMIAISLPSGN-EAGWWAAVWFFYTLLIAFGGF 105 Halobacillus h...
WP_008408923   35 yyLTLAQLIFVPVILEQLV-------------LLKnwqkLIIVIGQLAVTMLYFTQQDfLILLCVLAYLLSTLVIASHGV 101 Solibacillus
Q81F50         22 AIILLSVLLFIPMSFCIIDkr-krDGSQL--LFYKsvsfLYPIAAICAMLAFVTN-----HYLFALVWFVYTGIVALFGV 93  Bacillus cereu...
WP_012010230   29 FFVLLAILFFLPTALHFFKke-gkKHKEE--RLIGflmkAFPLASLCATAAFIYH-----SAWFASGWILYTILLALFGF 100 Bacillus pumilus
Q65IN8         29 ALLLLSMLFFVPAALDLIQh-------EN--GMFRlisvCFPYAACSASLSLLFH-----SPLFSLVWLCYTGMIALYGA 94  Bacillus liche...
O31813         28 ALVLLSILFFVPGIFPFVFrq-spVRAAQ--FMENgliqCYPVAAFFAVLALVTEVGG-----FALIWWMYTVFNALYAI 99  Bacillus subti...
jgi:Celf_2794  15 VVVGLGAVVVLPLGLRLVG--------AR--VVPRpgsgLWPAAGAGAAVAVWLPVGP-VATVLAVPFAVATLVLLGAAA 83 
jgi:Cfla_3556  15 AAIALGAVVVQPLGLRLLA-----ATGTV--RVPHprspAWPLAGAAAVLALLLPRGP-AAVALTLPFAGAAAVLLALAA 86 
jgi:Hoch_5603 135 SRALLRGPDPLEE----------------LCIDLGLVYLPVGALWLVVSCGGGT-LLGFSEPWVGLAAAHFHIAGAAATV 197
Q5UZ60        129 VRTRARGGLVFPE----------------TAIDAGFAYVSVGAVALLLAHLDLT--LWFDRVIIRLTAVHFHYAGFVLPV 190 Haloarcula mar...
WP_014641600  106 MRLLGRGFGPVEE----------------TVIDVGLIYIAIGGGWLVCSSAGWTgIFPYSETILQLTVVHYHYAAFVVPL 169 Halobacillus h...
WP_008408923  102 NRFLRRGFTNTAE----------------IMIDIGLIYIVMGGLWFLAFHLQLN--TGFSPIITWLTAIHFHYSAFLLCI 163 Solibacillus
Q81F50         94 SRLLERGWKPLEE----------------IAIDSAFIYLFLGGFWFSASVAKLS-IMHFSFDIVLLTAAHFHYSAFLLPL 156 Bacillus cereu...
WP_012010230  101 SRLLKRGIFPLHE----------------LMIDGAWMYLALGGLWFWLYTADIQ-VMTFSPIIVLLTVIHFHYSAFFIPL 163 Bacillus pumilus
Q65IN8         95 LRLWEREGRSLEE----------------ASIDSGLLYLPFGGGWLFAYTLNLQ-VMDFSPLIVLLTAVHFHYSAFLIPI 157 Bacillus liche...
O31813        100 LRLWETKIHRIEE----------------TSVLFGLIYLAGGGFWFFAYAAHLQ-IMQFGPLIILLTAVHFHYSAFLIPI 162 Bacillus subti...
jgi:Celf_2794  84 RLLVRPPTSRADDacpgpavgslpsgvrrLALAVALGTPAVGAAALVAERAGRG-LLGFDGDYLTLTVPHMLFAGFGACL 162
jgi:Cfla_3556  87 ATVTRARR--PPE----------------VAAIAALALPAVGAVALVADRAGAA-VLGFGGDILLLTVPHMLFAGFGACL 147
jgi:Hoch_5603 198 LAGAIGRALrAGdpals----rrywaIYALGARALLAGVPMVALGIALAPV-LELAGALVTVLALLLLAAAASAGV---L 269
Q5UZ60        191 AVGLTGRHLgDRs------------rGFRTVVGVILVGPALIAVGIAFSPL-VEVVAVSLFTVAVAAFGGVVLHRV---V 254 Haloarcula mar...
WP_014641600  170 VTGFFGRYRaecnrir----knfmvtPYLWLAAGVMAVPFITSPGLSLGAPfTSIAAGIYFLVLVWLCLWWFW------L 239 Halobacillus h...
WP_008408923  164 TIGLIGRLHmt--------------rYYKFCCAVIAAGPMLVAVGITFSRI-VEIVSVSLYVLAIFSINFYVMKWR---L 225 Solibacillus
Q81F50        157 SAGLIGRKRekr------------skVYDAIMFISMISPMTVAIGITYSRI-FEFFAVFLYLCAIYGYGFYVWRAK---F 220 Bacillus cereu...
WP_012010230  164 FYGFLGRQQake------------taLYKAAGWVILLSPVMIAVGISFSRL-FDTFSVILYVVALYIYGILCMKTR---F 227 Bacillus pumilus
Q65IN8        158 FNGMLGRKLkkk------------glLYAAVTWLIMLSPLFIAIGISFSKT-IDVIAVALYLSALYGSGFLASITA---F 221 Bacillus liche...
O31813        163 FNGLLGRTIrkh------------rmLYSWITWVILLSPLLIALGITYSKT-LDVIAVSIYMAAIYLHAFLVFTAA---F 226 Bacillus subti...
jgi:Celf_2794 163 VAALVAPRAaSGpgggavgpqrtaavLGDVAAVAVPVGVLLVLGGYFVSDA-AELVGAAALTAALWCAAGAALAD----A 237
jgi:Cfla_3556 148 AAGLAARADpGGr-------------LADLGAAGVTLGVVAVLVGYLVSDV-AELVGTVVLTAGMWCATAAAWRGAradA 213
jgi:Hoch_5603 270 PTLRGPWLRALLALALLCVPLSAALASVYALGGFLGRAW-LPLWLMVAAHGVPLALA 325
Q5UZ60        255 P-ACSRPQGLLLGIAAVALPVSMALALGYGVSTFTGRSLgLTISTMVALHGSLNAFG 310 Haloarcula marismortui
WP_014641600  240 SVYFKLWIGMALRSASLLLLGTMLLALFTSLNIWLEVYW-LQLNTIVGYQGLWiasv 295 Halobacillus halophilus
WP_008408923  226 P----RVQSLFIRLAFITLCFTIIWSFLYAYSNLTGMII-VDIPDMLDFHGLLNCLG 277 Solibacillus
Q81F50        221 ---NAISAKILLIVSSSTLMVTIMFSLIYSYGNLKHVLT-ITIAQMVWIHGVVNGIG 273 Bacillus cereus ATCC 14579
WP_012010230  228 ---RSTLAKGLVVFSSLVLMGTIVLSLLYSAGMLMRVTY-ISIDQMIWFHGSINAFF 280 Bacillus pumilus
Q65IN8        222 ---KNSAARRFVIFSSFTLMITIAFSLIYSYGVFRGRTT-FTIQEMIWIHGLVNAFG 274 Bacillus licheniformis DSM 13 = ATCC ...
O31813        227 ---RTKTGTFLIRLSSAVLMITIAFSMIYSFGVFRQEVT-LTINQMIWIHGFVNAFG 279 Bacillus subtilis subsp. subtilis str...
jgi:Celf_2794 238 GHVGSRTARLLLRVGAGVVLVAMVPALWWALGEATGVPH-PGLDLMVVTHGVANAVG 293
jgi:Cfla_3556 214 ARGRPATAAAWAAVAAVGSVVAMLLALWWALGEVTGVPH-PDLSWMVATHGAANALA 269
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