Conserved Protein Domain Family
Transposase_32

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pfam20167: Transposase_32 
Putative plant transposon protein
This entry represents a likely transposon related protein from plants. This entry appears related to ORF1 from the ATHILA group of Arabidopsis thaliana retrotransposons pfam03078.
Statistics
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PSSM-Id: 466318
Aligned: 124 rows
Threshold Bit Score: 68.3083
Created: 27-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_012575515  119 DKHNWKTFVNHSGNpYASIVREFYSCILERKQN-FVLVRGVRVCFTPKTLNFHFnlikdlkcndndvvdeyqclk--ntv 195
28_pfamImport   1 QELHMGFIFQDPSEcNISVVREFYANWKPDARShFVTVRGVEVQLTPSAINQLLgtadspadvltainisp--------- 71 
25_pfamImport   1 QELNMEFIFAEPNEcNLHMVQEFYSNWVTDSRShFVKVRGIDVTLTPALINDIVgtsq---------------------- 58 
15_pfamImport   1 RKLHMEFIYAELGEcNLHMVREFYANWAPNARSqFVTVRGVNVPITPAGINDILgtpqdtdplvltglnirp-------- 72 
OIS95992      110 HELGLGFVFKNPGEaNLSLMREFCAGWNIEDKEkLVPIRGRLIDISATALCRFVdapdvpcnplcdfidrp--------- 180
3_pfamImport    1 LDLGLSFIFDNPGDcNLMLVREFYANWLTETKYkNVPVRGKDVKFSARNLNELLgtpncdpdefnnmkdkp--------- 71 
XP_016455781   77 RRYQLDIFFEVPEVaNVQMVREFYANCPEHENG-VVTVCNTRVDTSLEAIRRMYqlpvfwgeydvyrtysrtn------- 148
XP_009803806  359 VGRELQIFIDEPDErNVMVVCEFYANVKEHVNG-IVTMRRKAMDASIEAIRRICqlpapvdpcgdyyemygrs------h 431
XP_016493100  483 RRRGLDIFFEEPITaNVMLVREYYANLPEHDNY-NVTVRKRQVNASIETIRDVYrlppveedymdmfqaynsk------l 555
KZM94204       67 QERGWESFCEAPEAvPLAIIREFYANAKENRDG-FTVVRGIRVDYSAEAIRRVIggrakrrneedwvverigrakrrfdd 145
XP_012575515  196 sdeklnsimktltvrgtnWKTEkgk--nvWKIPFLALKAIPKVWYRLICTKLLPNSNFQSVDKDRLLLLYC-VVEGFS-I 271
28_pfamImport  72 -pyqqirhalsgaqstakWIRHghr-gyhQSYPYAHMNREARVWLKMVMNCLIPGLHFTEVTRDRVCLVYA-LMKDLP-I 147
25_pfamImport  59 ----------------------------------------dtdpLGL---------HYTDITRDRVCLVYA-LMTSTK-L 87 
15_pfamImport  73 -syrvirhtlcgpqsmvkWTKN-------SKKRYHQSLPYAHML--------------------REARVYA-LMTATE-L 122
OIS95992      181 -tyrnnrhtlcgvnsnvvWTRDkry-ntrTSLPKVKFTKIAKVWLCLVNARLLPYEHDSVVVRKRVCQVYF-LMKWWP-V 256
3_pfamImport   72 -pyrdirhtlcgvdsaarWERSkdt-rrhNTLHFANLNQVARVWLKIVCSVLLPAKHLTDVTRDRVVLVYM-LMKGMS-I 147
XP_016455781  149 alwatlleticvpnreyiWIKHr------ITLNSQSLNWEAKCWLTIINSRMLPSSNMTDVNQPRAAAIYYfMAH--RdF 220
XP_009803806  432 tqwerffaticvpekeiiWMKYg------EKFHSTSLTFEGKCWLYVINNHLVTFSNTTEVNGPRATLILC-FINGHN-F 503
XP_016493100  556 ipwstftdiicrpdadiqWYKYg------NKFHANALKFEAKCWLYFINSRLLPSKNLSEVNIPRACLIWC-FMNRAW-F 627
KZM94204      146 dpvdlerlvydmcvpdttWKMTapplpahVSFPAAALNRYAKAWNAFICANIMPSSHGHEVTVDRAILLFG-IVSGKY-I 223
XP_012575515  272 NVGKIIYDEIIAcaFKKKKKerLLFPSLISDLCVRNGVR 310
28_pfamImport 148 NVGAVLKSAMRKarVHRGRR--YAFGGLITNLCRRAGVP 184
25_pfamImport  88 NIGAILKSIMKKacVHKGSR--YTFGGLITRLCHDAGVP 124
15_pfamImport 123 NVKVVLKSAMRKaqGHKGHR--YAFGGLITRMCRVAGVP 159
OIS95992      257 NVGQLICSQMAKsrKGKLNR--IFFVNMLTQYLRKEQVD 293
3_pfamImport  148 NVGTILSQNMMKfrNNLRWR--FCYGELITRFLRAEGIE 184
XP_016455781  221 DVARILHDEMLIrsPELLKG--FYFPSLVTRLCHLARVP 257
XP_009803806  504 DVAKLIHEKLFT--RRPVKKygFFFPSLVTRLCRAVRVP 540
XP_016493100  628 DVPLLIHKEMFQ--RVRIQRygLYYPSLVTLLCLRANVP 664
KZM94204      224 DLGHVIHQGILRflQGGTTGa-IPYGTIVTKLCRASGVR 261
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