Conserved Protein Domain Family
dapF

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PRK00450: dapF (this model, PSSM-Id:234768 is obsolete)
diaminopimelate epimerase; Provisional
Statistics
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PSSM-Id: 234768
Aligned: 656 rows
Threshold Bit Score: 201.566
Created: 9-Dec-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
152965469   5 QGLAFTKGHGTENDFVLVADPdg--vWnpT--ADVVAAICDRRAGVGGDGLIRAVrSsavpdaagtAPGAEWFMDYRNSD 80 
145220423   3 AEIPFSKLSGAGNDFVVIDNRnl----tiSlsQQEIAGMCRRRTGIGADGLILIE-P---------SASADFMMKYHNAD 68 
119356065   1 MQINFSKLSGAGNDFIIIDNRal--aIhlT--QPQINALCTRRTGVGADGLILVE-P---------SLHCDFTMKYFNAD 66 
189499284   1 -------MSGAGNDFIVVDNMkr----tiRlkESEIRALCTRRTGIGADGFILVE-P---------SETYDFSMRYFNAD 59 
78188320    1 MNIPFKKLSGAGNDFIVIDNRhnsieF--S--TETIKALCTRRTGIGADGLILIE-A---------SLSADFTMKYYNSD 66 
194337676   1 MKITFTKLSGAGNDFIVIDNRal--aIhlT--PLQINKLCTRRTGIGADGLILIE-P---------SATFSFSMKYHNAD 66 
78187819    3 REIPFSKLSGAGNDFIIMDNRdr--sItlE--ASAIRALCTRRTGIGADGLILIE-P---------SETASFSMLYHNAD 68 
194333117   3 TSIKFSKMSGAGNDFIVFDNMhk----diHlsADNIRSLCTRRTGIGADGLILIE-P---------SARFDFAMKYYNAD 68 
193213537   1 MQIEFTKMSGAGNDFIVIDNRqsqf----nlePEQVHAMCTRRTGIGADGLILIE-A---------SETADFRMNYHNAD 66 
21674831    1 -------MSGAGNDFIVIDNRqglfnL--T--HEQVRAMCTRRTGIGADGLILLE-T---------SETADFRMNYHNAD 59 
152965469  81 GSLAEMCGNGVRVFAEFLLRNRLlpEEAGdgrWFDVATRSGVKRLRR---EADGQ--WTADLGPWA-LTGGDDALgagsd 154
145220423  69 GHPGSMCGNGGRAAVWFAHSIGIpfEQEG---GCRFEAGGNPYRAWItasET-----VRLQMLEPKgFRDNIKTGg---- 136
119356065  67 GFPGSMCGNGGRCAVYFAFMQGVtsAEPE---HFSFEANSNRYDAEV-----TNSetVRLHM-----LDARDFRY----- 128
189499284  60 GKPGSMCGNGGRCAAFFSRTAGIt---GD---TCSFQANGSRYDAWVtgvER-----VKLKMTEPDtFRDDIHANg---- 124
78188320   67 GLLGSMCGNGGRCAAYFAYNSGVptQKSN---EYLFEANGNYYHAWI-----VDKeqVKLQMNPPH--DFKENLQve--- 133
194337676  67 GFLGSMCGNGGRCAVYFAFTIGIpaASGN---AYTFEANGNRYDAWV-----LGEenVKLKM-----LAPQGFKE----- 128
78187819   69 GLPGTMCGNGGRCAVWFARSIGVqpDAGG---CFRFEANGDPYQAWV-----SGPetVRLRMREPR-GIRDEIDLgg--- 136
194333117  69 GLPGSMCGNGGRCAVYFAWTIGAc---GT---TTAFEANGNRYDAWVcdnEA-----IRLKMILPHdFRDEFGSNg---- 133
193213537  67 GYPGSMCGNGGRCAVYFSYLIGIrpAGN----RYRFEAGPGTYEAEIt---gKES--VRLHMLPPKnFRDDLHAGa---- 133
21674831   60 GFPGTMCGNGGRCAVWFAHLIGIrpTGK----HYRFEAGPSTYEAEV-----TGEesVRLHMLPPS--DFRDGLQag--- 125
152965469 155 alvlvpgldAVAR---PALSVDLGNPHTVVALpD---EAELAAAdltrAPEVR---PVPPQGTNVELVvpllafdvtgdD 225
145220423 137 ---------------gACHFVDTGSPHAIFYTtg-ldGVDVVGR----GGEVRhrtDLFPGGTNVNFI-----------E 185
119356065 129 ---------HMEIegfACTFVNTGSPHVVIFA-DdinAINVAEK----GVAIRrntDFFPEGTNVNFV-----------E 183
189499284 125 ---------------lNCHFVNTGSPHTIIYTge-leTFNVHDT----GYAVRnnnSLFPEGTNVNFL-----------Q 173
78188320  134 --------------glLCYFLNTGSPHVVTYV-DdvnIINVYEK----GDAIRhrtDIFNGGTNVNFV-----------Q 183
194337676 129 ---------NLDLegeQCFALNTGSPHAIIYI-SdldAVDVNKK----GSAIRhrtDFFPDGTNVNFI-----------E 183
78187819  137 ---------------qYCAFIDTGSPHAVIRT-EgldAVDVVGE----GRAIRhrtDIFPGGTNVNFI-----------E 185
194333117 134 ---------------lSCNFVNTGSPHTIIFTde-ldTFDVEST----GRLIRndsKLFPEGTNVNFL-----------Q 182
193213537 134 ---------------wSCHFVDTGSPHAIAYVdNl-dQMDVFTE----GRTIRnnkEVFPEGTNVNFL-----------E 182
21674831  126 --------------awNCHFVDTGSPHAIAYV-NnldQLDVLTE----GGNIRhnkELFPDGTNVNFL-----------E 175
152965469 226 VPDIGEIAMRVHERGS-GETRSCGTGACAAALA----TRAwAGrgapdVWRVDVP-GGRLVVTVGagsslaqG---TVWL 296
145220423 186 VTAPDSISLRTFERGVeDETLACGTGAVASALMshrlGMTpST-----TIQVRVQsGDTLEVRFSsd-------mkEIFL 253
119356065 184 ITSPSSIALRTFERGVeEETLACGTGAVAAAIIsrklGKIlPN-----SVKVTVKsGDMLEVSFSen-------mqNITL 251
189499284 174 VTGPDSLSVRTFERGVeAETLACGTGAVAAALMsyrlGKVsST-----SVSVTVKsGDVLKVEFSed-------mrEVFL 241
78188320  184 QTSANELIIRTFERGVeDETLACGTGAVASALIshmlGKTnST-----SLNVTVRsGDTLQISFT-------SamenIYL 251
194337676 184 ITSPNSLALRTFERGVeEETLACGTGAVAAALMshklGKIsST-----TVQVTVKsGDTLEVEFNes-------mdEVFL 251
78187819  186 VTATDSIDLRTFERGVeDETLACGTGAVAAALLsrrlGMTsAD-----SIRVRVKsGDMLNVTFSed-------mrEVYL 253
194333117 183 VTSPESLKVRTYERGVeAETLACGTGAVAAALMsyklGKIaSR-----SVSVSVRsGDILTIDFSed-------mqDVYL 250
193213537 183 VTAPDALSIRTFERGVeDETLACGTGTVAAALMsyrlGKVaSS-----PVRVTVRsGETLMVGFN-------DamdEIYL 250
21674831  176 ITAPDALSIRTFERGVeDETLACGTGTVAAALMsfrlGKVtSS-----LVRVKVKsGETLMVGFNem-------mdEIYL 243
152965469 297 SGPAQLVATGVLAP 310
145220423 254 TGPARIVYRGTTTS 267
119356065 252 TGPAKIVYQGSVTI 265
189499284 242 SGPAKVVYTGTVSV 255
78188320  252 SGPAKIIFSGTFEK 265
194337676 252 SGPAKIIYEGSFTI 265
78187819  254 TGPAVIVYTGVVKA 267
194333117 251 SGPATIVYTGSIQM 264
193213537 251 EGPARPVYQGTIAL 264
21674831  244 EGPARAVYRGTITL 257
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