Conserved Protein Domain Family
bZIP_HLF

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cd14695: bZIP_HLF 
Basic leucine zipper (bZIP) domain of Hepatic leukemia factor (HLF) and similar proteins: a DNA-binding and dimerization domain
HLF, also called vitellogenin gene-binding protein (VBP) in birds, is a circadian clock-controlled Basic leucine zipper (bZIP) transcription factor which is a direct transcriptional target of CLOCK/BMAL1. It is implicated, together with bZIPs DBP and TEF, in the regulation of genes involved in the metabolism of endobiotic and xenobiotic agents. Triple knockout mice display signs of early aging and suffer premature death, likely due to impaired defense against xenobiotic stress. A leukemogenic translocation results in the chimeric fusion protein E2A-HLF that results in a rare form of pro-B-cell acute lymphoblastic leukemia (ALL). bZIP factors act in networks of homo and heterodimers in the regulation of a diverse set of cellular processes. The bZIP structural motif contains a basic region and a leucine zipper, composed of alpha helices with leucine residues 7 amino acids apart, which stabilize dimerization with a parallel leucine zipper domain. Dimerization of leucine zippers creates a pair of the adjacent basic regions that bind DNA and undergo conformational change. Dimerization occurs in a specific and predictable manner resulting in hundreds of dimers having unique effects on transcription.
Statistics
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PSSM-Id: 269843
Aligned: 39 rows
Threshold Bit Score: 55.2509
Created: 15-Aug-2013
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:DNA binding site [nucleic acid binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1            ## ### ###### ###                                    
Q64709    224 KDDKYWARRRKNNMAAKRSRDARRLKENQIAIRASFLEKENSALRQEVADLRKELGKCKN 283 Norway rat
GAA50702   49 RNEKYWSRRMKNNASAKRSRDARRMLENQVHMKATALERENEQLRLQMTLLVEENKKLRD 108 Clonorchis sinensis
NP_504576 115 KDVAYWERRRKNNDAAKRSRDQRRMKEDEMAHRATSLERENMLLRVELDQLRAETDKLRA 174 nematode
EFW42912  251 RTEKYLERRRKNNEAAKRCRDAKKLKEDMTGLMADALSEENQQLRARVAFLEDEIEELKR 310 Capsaspora owczarzaki ATCC 30864
NP_525049 383 KDAAYYERRRKNNAAAKKSRDRRRIKEDEIAIRAAYLERQNIELLCQIDALKVQLAAFTS 442 fruit fly
EDO48945  287 KTEQYREKRRKNNASAKRSREARKMREIHAQTAAAYLQDENAKLRALVNVLKEENVYLRE 346 starlet sea anemone
EDV27729  115 KRMSHDERRQRNNLSAKKSREAKKIKDRYRSITAKSLETENARLKLEIQMMEKQIQTIRQ 174 Trichoplax adhaerens
EJW88796  111 KDEAYRERRMKNNESARKSRELRRQKEESTQIRCDQLLQENHILRAELSLLQNQMEQFRQ 170 agent of lymphatic filariasis
EFO18546  116 ARKKYRERRDKNNLAAKKSRSNRREREKMMQRKVDELEKENEALRAQLAIYTQQLDYARK 175 eye worm
CAP32428   45 FDKSYYERRARNNKAAQKSREARKKIDAENSHRVNQLEMENNHLKAYIYKLYQENMMMKN 104 Caenorhabditis briggsae

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