Conserved Protein Domain Family
NHT_00031

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TIGR04181: NHT_00031 
aminotransferase, LLPSF_NHT_00031 family
This clade of aminotransferases is a member of the pfam01041 (DegT/DnrJ/EryC1/StrS) superfamily. The family is named after the instance in Leptospira interrogans serovar Lai, str. 56601, where it is the 31st gene in the 91-gene lipopolysaccharide biosynthesis locus. Members of this family are generally found within a subcluster of seven or more genes including an epimerase/dehydratase, four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD) and a nucleotidyl transferase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analogous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar.
Statistics
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PSSM-Id: 275034
Aligned: 40 rows
Threshold Bit Score: 512.476
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_06232335   19 IPLHAPVFAGREREYLCDCVDTTFVSSVGKYVDRFEQMTADYTGAGRAVAVVNGTCALEMALRLLDVGPGDLVLTQALTF 98  Desulfovibrio a...
ZP_01853017    8 IPLSIPHLAGNEWNYLKDCLDSGWVSSVGSYVDMFEQRISKYVGTEYGIATVNGTAALHLSLLACGVQPGDEVIVPAFTF 87  Planctomyces ma...
ZP_06882102    5 IPLSVPNIKGNEQKYVLEALSQEWVSTAGSYINRLEEEIASYLKVESAVACQSGTAGLHLALQVSGVDTDKEVIVPTLTF 84  Clostridium len...
WP_010942618   2 IPLSVPTLKGNEWKYVKECLDTGWVSSAGKFVDRFESDFCAFTGSRHAVACVNGTAALQVALRIVGVCAGDEVIVPTLTF 81  Geobacter sulfu...
WP_003512892   6 LPLSIPNLGEKEIEYVTNAVKTGWISTAGPYVAEFESKLSEYVSCKGAVSCQNGTSGLHTALMVCGISKDCEVIVPTLTF 85  Clostridium the...
WP_015923416   7 IPLSVPNLSLDILDNLKECIETGWVSTGGRFIKEFEDKVAKYVRVEEAVGVQSGTGALHLGYQLLGVKPGDEVIVPTVTF 86  Halothermothrix...
WP_011392273   6 IPLDWPNISELERDYILKALASGYVSSAGPLVREFEQRFAAYLGIRHAVAVVNGTAGLHLALKLLGIGPGDEVIVPALTF 85  Moorella thermo...
WP_007047346   5 IPLSVPNFGPREAELAGEAITSGWVSTSGGKVTEFEEALARYLGMDRAVACNGGSSALHLAAMAAGITRGDEVIVPTLTF 84  Subdoligranulum...
WP_015814573   7 IPLCEPNLNGREKEYMAEAVDSNWLSG-GSFLKRFEQQLADYTGASHAIGVSNGTSALQVALTLAGVERGDLVLVPDLTF 85  Dyadobacter fer...
WP_013121604   4 IYLDAPNLGPVEKEYLVKCLNSNYVSTVGPFVPDFEEEFARLLGAEAAVAVQSGTAALHMALHALGIGPGDEVIVPSLTF 83  Thermincola potens
ZP_06232335   99 VATANAI-AHTGATPVFLDSDPDTLGLSPDALLRFLQN----------DQATGRRVGACVPVHILGHACRIREICEICAA 167 Desulfovibrio a...
ZP_01853017   88 IAPVNAI-RYCGANPVLIGSESKTMNLDVQKVQEFLEEecisdpaglkNKQTGRYIKAILPVHIFGHPAEMSSLVSLADR 166 Planctomyces ma...
ZP_06882102   85 IAAVNPV-KYLGATPIFMDCN-ETLTIDPYKLEQFCKEecelsngkliNKRTKKHISAIVVVHVFGNTADMEKIMKIAKN 162 Clostridium len...
WP_010942618  82 IATVNAV-TYLGAEPVFMDCD-EFYNIDVRKTAEFLEQetefrdgstwSRVTGRRIAAIVPVHVFGNAARMSELVALCRE 159 Geobacter sulfu...
WP_003512892  86 IAAVNPV-KYAGAEPVFMDCD-DSLTLDVAKLKDFFEKecifkdgkliNKASKKHIKAVLVVHVFGNMADMESIMELCQK 163 Clostridium the...
WP_015923416  87 IATVNPI-TYLGAHPVFMDCD-DTLNMDLDKLEEFLDShceitdkgllNKKSKRIIKVLTVTHIFGNPIDMERVMKIAGR 164 Halothermothrix...
WP_011392273  86 IATVNPV-VYAGARPVVVDVDPWTWNIDPAAIEKTITKh----------------tRAIIPVHLYGNPADMDAILGLARE 148 Moorella thermo...
WP_007047346  85 IAAVNPLtRYVGAEPIFIGCD-DSLCIDPDAVEAFCRDhcelrdgklyNKATGAHVKALEAVHVFGNMADMVRLTEIARR 163 Subdoligranulum...
WP_015814573  86 VATANAV-KYLGADPVMIDIHPATWLIDTELLLDFLEKhtyrntggcfHNESHRRVKAVVPVHLLGNVCDMELINDIAAR 164 Dyadobacter fer...
WP_013121604  84 IATVNPV-LYVGARPVIVDVDPATWNIDPVGLEQAVTEn----------------tRAVIPVHLYGNPCQMDAIMEIARR 146 Thermincola potens
ZP_06232335  168 WNIPVVEDAAEALGST-----L-----NGKHLGTFGQVGVLSYNGNKTITTGGGGMLLTDDPALGARAKHLTTTAKQPHP 237 Desulfovibrio a...
ZP_01853017  167 YQLPVIEDASESLGSE-----Y-----RGKKTGSLATVGCFSFNGNKIITCGGGGMVTTNQESLARRIRHLSTQANS-KP 235 Planctomyces ma...
ZP_06882102  163 YHLIVIEDATEALGSY-----YtegvyKGKFLGTIGDFGVYSFNGNKIITTGGGGMIVAKDAQKLKEIKYLSTQAKD-DE 236 Clostridium len...
WP_010942618 160 RNIKVVEDSTESLGTV-----YcsgelDGKHTGTVGDMGCFSFNGNKIITTGGGGMIVTDVPEYAERARYLTTQAKD-DE 233 Geobacter sulfu...
WP_003512892 164 YNLKVIEDATEALGTYyldgkY-----KGKYAGTIGDAGVYSFNGNKIITTGGGGMIVSNNENFLKRAKHLTTQAKC-DE 237 Clostridium the...
WP_015923416 165 YRLKVLEDAAESLGSFyisgkY-----KGKHTGTIGDLGVFSFNANKILTTGGGGMIVAKDKKLVNKARFLSTQAKT-DP 238 Halothermothrix...
WP_011392273 149 YGLYVIEDATEALGST-----Y-----KGKKAGTFGHIGVFSFNGNKIITTGGGGMLVTEDPELARRARILVNQGREPGE 218 Moorella thermo...
WP_007047346 164 YGLILIEDATEALGTH-----YtdgpfAGKFAGTIGDIGCYSFNGNKIITTGAGGAVVSNHPDWAEHAKHLSTQAK-ADL 237 Subdoligranulum...
WP_015814573 165 FSINVVEDAACSLGSF-----R-----HNRHSGTSGLLGTMSFNSNKIITTAGGGAILTNDEALAKRARHLITQAK-SHA 233 Dyadobacter fer...
WP_013121604 147 YNLYVIEDATESLGAL-----F-----NGHYTGTFGDFGCFSFNGNKLITTGGGGMLVTGDRERAQRVKFLVNQARDAAR 216 Thermincola potens
ZP_06232335  238 WEFRHDEPGWNFRMPNINAALGCAQMERLDDILRDKREIASAYRDFFTSFnGAQYLDAP-TGCDANFWLNTV-LFEDn-- 313 Desulfovibrio a...
ZP_01853017  236 FEYEHDEVGYNYRLTNIQAALGVAQLEQLDSFLEIKRSNAELYRQLLSEIpQVDLAWEE-PWAKSNFWLCTL-LVPA--- 310 Planctomyces ma...
ZP_06882102  237 LNYIHNQVGYNYRMTNLQAAVGVGQLEQLENFIAVKEKNYMLYKDLLKEIeGVRLLEFA-SNIRPNYWFYSL-QLDKkl- 313 Clostridium len...
WP_010942618 234 VRYVHNEVGYNFRLTNVQAAIGVAQLELLPEFLEAKRANYLAYQERIDRIdGLILAEGP-AYARNNHWMYAL-QIDPavy 311 Geobacter sulfu...
WP_003512892 238 LYFIHDEIGYNYRMTNIQAALGLAQLEQIEHFIETKRKNYEFYKQEINKIhGLKILEFK-GNIRPNYWFYSL-YIDEny- 314 Clostridium the...
WP_015923416 239 LYFKHDEIGYNYRLTNIAAALGTSQIDKIEDFVKIKKENYHLYKKEINNIeGLELLPFN-EGTRPNYWFYSL-IVNSeky 316 Halothermothrix...
WP_011392273 219 TEYEHKEIGFNYRLTNLQAALGLAQLERLPEFLATKRRNAAIYRRDLYNVsGISWQQEL-PGAESNWWLFSI-LVDKkky 296 Moorella thermo...
WP_007047346 238 LQFLHDEVGYNYRMTNVQACLGLAQLERLEGFIAHKKELYDHYVEKLDGVkGLRILPFRtEGIRPNRWFFSLyLKDSg-- 315 Subdoligranulum...
WP_015814573 234 TEYIHDALGYNFRLVNPLAAMGAAQMEQLPGFVRRKKEVAEYYCRVFDGLp-VQFQQLT-PGTDSNHWHSAM-LVNEs-- 308 Dyadobacter fer...
WP_013121604 217 -GYYHPEMGFNYRMTNIEAALGLAQLSRFRELLARKKRYAVIYRETLGDIpGLQFQSEC-QGGESAHWLSCL-RVSTv-- 291 Thermincola potens
ZP_06232335  314 -TRRDEFLEFSNAHGVMTRPLWTLMPELPMFRDNAR-DDLSVARNSCDRAVNLPSG 367 Desulfovibrio aespoeensis Aspo-2
ZP_01853017  311 -ADRKPLMDHLLSENIQVRPAWKLMHTLPMYQDCQK-YRLEETEAVFEHCISIPSS 364 Planctomyces maris DSM 8797
ZP_06882102  314 sISIDMLIQNMRDFGIQTRPIWGLIHQQRPYASCQN-FKIEKAEEYHQSIINLPCS 368 Clostridium lentocellum DSM 5427
WP_010942618 312 gKDREQLMEYLKGEGVQTRPVWYLNHLQVPFRDCRN-YRIEKAFQLLEATLSIPCS 366 Geobacter sulfurreducens
WP_003512892 315 pLNRDELIRYLASKKIQTRPIWGLISEQKPYKTHQT-YRIEKAYKYLEHVVNIPCS 369 Clostridium thermocellum
WP_015923416 317 gLNRDELLHKLNSVGIQTRPLWGLVSKQKPYKNYFA-YKIEKARYYVNNLINIPCS 371 Halothermothrix orenii
WP_011392273 297 gLDKLELMQYLRKEGIQIRPLFKPLNWQQCYRAYNF-NHCPIAEALYMSGLNLPSa 351 Moorella thermoacetica
WP_007047346 316 -LDRDTVIEKLQAQGIQTRPVWALIHEQADYPRNEA-YGLDKALNYRRYIVNLPCS 369 Subdoligranulum variabile
WP_015814573 309 ----RALIVALATESIETRPLWTPIHQLPVFRQNLFiTRENVSSEVSLRGMMLPCS 360 Dyadobacter fermentans
WP_013121604 292 -KAVKLA-AALAEEGIPTRRVFMPVSDMPYLREYAR--PCPHARDIYEHGICLPSS 343 Thermincola potens
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