4AKM,5GV0


Conserved Protein Domain Family
Lamp

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pfam01299: Lamp 
Lysosome-associated membrane glycoprotein (Lamp)
Statistics
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PSSM-Id: 460152
Aligned: 68 rows
Threshold Bit Score: 107.665
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4AKM_B         2 VKTGIYQVLNGSRLCIKAEMGIQLIVQ--DKESVFSPRRYFNIDPNATQASGNCGTRKSN--LL---LNFQGGF----VN 70  human
XP_003382483 124 PEKEILVIED---NCFFFEATEIIFTYydKRFSNTTTSHLSTLYPDPIDAVIGCTKDSRLhsFKrsyFNATSGSsvlnLT 200
XP_003768813 122 GTVGDYFGANGSQLCVRLRAQIQMRVLy-QSHDGEKLWGIFILNPNRTVAQGGCEGNRSS--LN---LSFPEGK----LI 191
XP_006105570 169 AAVGDYTWTNVSLPCVHLQAQIQIRIRy-PTQGGKEAWGISVLNPNKTTPQGGCEGAHPH--LL---LSFPYGQ----LS 238
XP_016825511  95 EALGNYTWTNGSQPCVQLQAQIQIRILy-PTQGGGKAWGITTLNPNKTKVQGGCDHAYPH--LS---LSFPYGR----LT 164
Q4FZY1       129 GALGNYTWTNGSQPCVQLQAQIQIRILy-LTQGGKKAWGLSVLNPNKTKVQGGCDSAHPH--LA---LSFPYGQ----LT 198 Norway rat
ELW63601     153 NAIGDYVWTNGSQPCVHLQAQIQIRVLy-PTQGGGKAWGTSVLNPNQTKVQGGCEGAQPH--LL---LSFPSGH----LH 222
XP_004058553 155 ETIGDYTWTNGSQPCVHLQAQIQIRVMy-TTQGGGEAWGISVLNPNKTKVQGSCEGAHPH--LL---LSFPYGH----LS 224
XP_003466301 132 EAVGDYTWTNGSQPCVRLQAQIQIRVLy-PTQGGGEAWGISVLNPNKTKVQGGCADAHTH--LR---LSFPYGH----LS 201
Q2KIW2       136 EAIGDYTWSNGSQPCVRLQAQIQIRVLy-PTQGGGEAWGISVLNPNRTKAQGGCEGTHSH--LL---LSFPSGQ----LS 205 cattle
4AKM_B        71 LTFTKD----EESYYISEVGAYLTV---SDPETVYQ----GIKHAVVMFQTAVGHSFKCVSEQSLQLSAHLQVKTTDVQL 139 human
XP_003382483 201 FEFALNy--vEDSWYLSSLQVVNLT----DGGRIFDygtcGDAINVPEELSYFCSQVNCHGHEQVDDSISVSLDITNLRV 274
XP_003768813 192 FGFKQDs--iMKSVYLSYLATEFNVsfpSAIRWTFS----AENSSLQDLQAPLGYSFCCRNR-SIALSPEIHLDLLALQL 264
XP_006105570 239 FGFKQEp--lQSTVYLNSVAVEYNVsfpQATQWTFS----VQNSSLRELQAPLGQSFSCRNA-SIILSPAFHLDLLFLKL 311
XP_016825511 165 FGFKQDm--eQGTVYLNYMAVEYNVsfpQAAQWTFS----AQNSSLRELQAPLGQSFCCRNT-SIVLSPAVHLDLLFLRL 237
Q4FZY1       199 FGFKQDrhqsHSTVYLNYMAVEYNVsfpQAAQWTFS----AQNSSLQELQAPLGQSFCCGNT-SIVLSPAIHLDLLSLRL 273 Norway rat
ELW63601     223 FGFQQEa--qQSTIFLSYMAVEYNVsfpHAAQWTFS----AQNSSLRDLQAPLDRSFSCRNA-SITLSPALHLDLLFLRL 295
XP_004058553 225 FGFMQDl--qQKVVYLSYMAVEYNVsfpHAAQWTFS----AQNASLRDLQAPLGQSFSCSNS-SIILSPAVHLNLLSLRL 297
XP_003466301 202 FGFKQAvqqsQSVVYLSYMAVDYNVsfpRAAQWAFL----AQNSSLRDLQAPLGQSFSCGNA-SILVSRGFHLDLLSLRL 276
Q2KIW2       206 FGFKQDp--lQSAVYLNYMAVEYNVsfpQAVQWTFS----VQNSSLRDLQTPLGHSFSCRNA-SIIVSPALHLDLLSLKL 278 cattle
4AKM_B       140 QAFDFE 145 human
XP_003382483 275 DAFVKS 280
XP_003768813 265 QAAQLL 270
XP_006105570 312 QAARLP 317
XP_016825511 238 QAAQLP 243
Q4FZY1       274 QAAQLP 279 Norway rat
ELW63601     296 QAAQLP 301
XP_004058553 298 QAAQLP 303
XP_003466301 277 QAAQLP 282
Q2KIW2       279 QAAQLS 284 cattle
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