2IJL,1O7L,2ESN,3FZV,4IHS,4X6G


Conserved Protein Domain Family
HTH_1

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pfam00126: HTH_1 (this model, PSSM-Id:395075 is obsolete and has been replaced by 459683)
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Bacterial regulatory helix-turn-helix protein, lysR family
Statistics
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PSSM-Id: 395075
Aligned: 1249 rows
Threshold Bit Score: 29.2775
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2IJL_A                26 HGKVELXQLIAETGSISAAGRAXDXSYRRAWLLVDALNHXFRQPVICsqRg-GkqGggAALTVFGA 90  Agrobacterium fabrum ...
Q8EI60                 4 IQRVKAFVIAAQLGSVSAAARQLGKRQPQVSQWIAELEVDLGVQLFQ--Rg----AnqVELSLAGQ 63  Shewanella oneidensis
Q7CS90                63 TRQLTIFVEAAKARNFRAAAVQLGIAQPAVTQRIRQLEENLGFKLFH--RinR--G--VELTAAGQ 122 Agrobacterium fabrum ...
Q883L9                 9 FRHLVCFLEVARQGSLARASDALAISQPALSKSLKELETLLATTLFV--Rs----KsgAALTDAGV 68  Pseudomonas syringae ...
Q88M61                 9 YRHLLCFLEIARQGSLARAADILSISQPAISKTLKELEDLLEARLFE--Rs----RqgVELTPAGT 68  Pseudomonas putida KT...
Q2YKQ3                 8 FRHLHTFVEVARQKSVVKASEILNISQPAVTKTMRELEEILGVPVLE--RdgR--G--IRITRYGE 67  Brucella abortus 2308
P0A4T6                 8 FRHLQTFVEVARQKSVIRAAEILHVSQPAVTKTIRELEDVLGVSLLE--RegR--G--IRISRYGE 67  Agrobacterium fabrum ...
goetting:PGA1_c02580   9 LRHLEVFVEVARKMSVTQAAERLGMTQPAVTRALRELEAVCEKPLVE--KhgR--G--IRLSAYGE 68  Phaeobacter inhibens ...
P77744                 7 IHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFF--Rr----SkgVTLTDAGE 66  Escherichia coli K-12
Q7N101                 7 LNQLRAFVEIYRHGSIRAASRFLLLSQPALTKSIRELEDSLGAKLFI--Rs----NqgIHLTGCGK 66  Photorhabdus laumondi...
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