Conserved Protein Domain Family
ND1

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MTH00071: ND1 
NADH dehydrogenase subunit 1; Provisional
Statistics
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PSSM-Id: 214418
Aligned: 73 rows
Threshold Bit Score: 526.881
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
53686293    5 ASQLINPLMYIIPVLLAVAFLTLVERKILGYMQLRKGPNIVGPTGLLQPIADGLKLFIKEPIRPSTSSQTLFMLMPTMAL 84 
58618665    5 ITHLINPLLYMVPILLAVAFLTLIERKVLGYMQHRKGPNIVGPMGLLQPIADGVKLFVKEPIRPSTSSQALFLLAPTMAF 84 
5834982     5 ITHLINPLLYMIPILLAVAFLTLIERKVLGYMQHRKGPNIVGPTGLIQPIADGVKLFIKEPVRPSTSSQTMFLIAPTMAL 84 
134303092   5 LTHLVNFLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPTGILQPVADGLKLFLKEPIRPSTSSQLLFMLTPTMAL 84 
58045564    5 VTNLINPLLYIVPILLAVAFLTLVERKVLGYMQFRKGPNIVGPLGLLQPIADGVKLFIKEPVRPATASQTLFIFAPIMAL 84 
58045602    5 LTHLVNFLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPTGILQPIADGLKLFLKEPVRPSTSSQLLFMITPTMAL 84 
115494665   3 LPLIISSLCYIAPILLAVAFLTLVERKVLGYMQHRKGPNIVGPTGLLQPIADGIKLFIKEPIRPSTSSQTLFLLAPMMAL 82 
157939554   3 LPLVISSLCYIAPILLAVAFLTLVERKVLGYMQHRKGPNIVGPTGLLQPIADGIKLFIKEPIRPSTSSQTLFLLAPMMAL 82 
55583345    5 LTHLVNFLLYIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPTGILQPVADGLKLFLKEPIRPSTSSQFLFMLTPTMAL 84 
58047407    5 LTYVLNPLLYFVPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPTGLLQPVADGVKLFIKEPIRPSTSSQVLFIVAPVMAL 84 
53686293   85 TLSLAIWMPLPMPHAMSNLNLTILFLLALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLIILCLVLMTGN 164
58618665   85 ALAMSIWAPIPMPFSLADLNLGILFILALSSLTVYTILGSGWSSNSKYALIGALRAVAQTISYEVTLGLILLCMIMLTGG 164
5834982    85 ALAMSIWAPLPMPFSLADLNLGILFILALSSLAVYTILGSGWSSNSKYALIGALRAVAQTISYEVTLGLILLCMIMLAGG 164
134303092  85 ALAMFIWTPLPMPFSLVEINLSILFILAISSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVTLALILLCLIMFTGN 164
58045564   85 TLAMAIWAPIPMPFSMADINLGVLFILAISSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVTLALILLCLIMFTGG 164
58045602   85 TLALFIWTPLPMPFSLVEINLSILFILAISSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVTLALILLCLIMFTGN 164
115494665  83 SLAMIIWTPIPMPVSLSDMNLGVMFLLALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVTLALILLCTILLSGN 162
157939554  83 SLAMIIWTPIPMPVSLSDMNLGVMFLLALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVTLALILLCTILLSGN 162
55583345   85 TLAMSIWTPLPMPFSLVEINLSILFILAISSLTVYSILGSGWSSNSKYALIGALRAVAQTISYEVTLALIPLCLIMFTGS 164
58047407   85 TMALAIWAPMPMPFSISDINLGILFILALSSLTVYSILGSGWASNSKYALIGALRAVAQTISYEVTLALILLCLIMFTGG 164
53686293  165 FNLTNFNFTQEFMWFIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILLMNTLST 244
58618665  165 FTLFNFNTTQEHMWLVIPGWPMAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFVLFFLAEYANILMMNTLST 244
5834982   165 FTYTTLMTTQEQMWLIIPGWPMAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFSLAEYANILMMNTLSY 244
134303092 165 FTLFSFNTSQEWVWLIAPGWPMAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLST 244
58045564  165 FTLYNFNWTQEQVWLVVPGWPMAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGSFALFFLAEYANILMMNTMSA 244
58045602  165 FTLSSFNVSQEWIWLIAPGWPMAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLST 244
115494665 163 FSLQNFSITQEPLWLLIPAWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTISA 242
157939554 163 FSLQNFSITQEPLWLLIPTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTVSA 242
55583345  165 FTLYSFNTSQEWVWLIAPGWPMAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSA 244
58047407  165 FTLYNFNFTQEHMWLIIPGWPMAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILMMNALSA 244
53686293  245 ILFLGTTNNLAQPELSTTTLILKATTLSILFLWIRASYPRFRYDQLMHLIWKNFLPLTLAMTLLHISLPIFMYGNPPM 322
58618665  245 ILFLGSSF-IDTPELTTISIMFKASLLSLLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTLWHISLPISLSGLPPQ 321
5834982   245 LILFLGSSFMNQPELTTISLMIKSSILSMIFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTLWHISLPISMLGLPSQ 322
134303092 245 ILFLGSYYLIIQS---PIILMIKAAALSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLALTIWHIALPISTAGLPPQ 319
58045564  245 VLFLGAFVN--NSWWSTPSIMIKASLLSMLFLWIRASYPRFRYDQLMHLVWKNFLPITLALTMWHISLPIASMGLPPQ 320
58045602  245 ILFLGSYYLILQS---PLILMIKATALSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLALTIWHIALPISTAGLPPQ 319
115494665 243 VIFLGSSTLFILT-LTTSSLMLKSAILSMVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALTIWFISFPISLLLTPPI 319
157939554 243 VIFLGSSTLFILT-LTTSSLMLKSSILSMIFLWVRASYPRFRYDQLMHLVWKNFLPLTLALTIWFISFPISLLLTPPI 319
55583345  245 VLFLGSYHFILQS---PVMLMMKATALSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLALTIWHIALPISTAGLPPQ 319
58047407  245 VLFLGSTSQ--TPELMTATLMVKASLLSLLFLWVRASYPRFRYDQLMHLVWKNFLPITLALTLWHISLPPSVMGLPPL 320
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