Conserved Protein Domain Family
YfdV

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COG0679: YfdV (this model, PSSM-Id:223751 is obsolete and has been replaced by 440443)
Predicted permease [General function prediction only]
Statistics
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PSSM-Id: 223751
Aligned: 50 rows
Threshold Bit Score: 108.535
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1730754    9 AIWVSVKPIIKIYLIIGVGFLMAKMGILTVEATRIISDIVLTVLLPSLSFNKIVANIEDKDiKSVGIICLSALLIFGSGF 88  baker's yeast
15893657   1 --MYVFEQIVILFLIMGIGYYAAKSKIIDDDTTSHLSNFIVSITLPLMILTSFNVEYSRKT---VITIINLLVFSVAAFI 75  Clostridium acetobu...
15896202   1 MNNNVLNQVLMLFLMLLVGIYASKMKYIDKKMNAGLSNLLLKITLPLLIINSFITMKFSKS--VLNVGEDILLYTLIIHI 78  Clostridium acetobu...
15673902   1 -------------------------------------------------------------------MFMGLFSNLLLVF 13  Lactococcus lactis ...
20094996   1 --MGGLEAFLEILGLVFVGYTLRKVGVFSKDTPSHLNAYVVYLAMPALVFTAMLRAPIQGLlQHLKLVVISMLLSVMCAL 78  Methanopyrus kandle...
15927838   1 ----MTEQFTMIILLIALGYFLKRINFIKATDSQVIATLVLNVTLPSLVIVNLNSAELKLS---FS--ILPILMIIYGIV 71  Staphylococcus aure...
3183308   15 LLRPIIESDLEVIVIALGGYVLAKKGFLPRDAQKVISSLNVYFFTPCLVFEKVGNGLNLKMlIDLSLLPVFYVIISAASI 94  fission yeast
15643001   1 ---------MEFSVIILIGYLTKKFFERDTGK--ILSKLVVNFTLPAAIFYSFSTSRFHFS--KFAFTATGILSNLLLIF 67  Thermotoga maritima
1730590    8 AIYIALKPIFKIYTIMLVGYLVAKFDIVSMENAKGISNMVVNAILPCLTFNKIVSNISWRDiKEIGVIILSAFILFVLGA 87  baker's yeast
6324666    9 AIWASVRPIIKIYLIIGVGFGLCKMNILTVQATRSISDIVLTILLPCLSFNKIVANIEDNDiKDVGIICLTSVILFATGL 88  baker's yeast
1730754   89 FFAYVVRLFLPVPKQWYG-GILAGGMFPNISDLPiaylq-smdqGL---------VFSEEEGNKGVANVIIFLTMFLICI 157 baker's yeast
15893657  76 ISIVIGKIISFKFAMDKRdILMFMSIFSNCGFIG----------FP---------VLKVVYGNKGVLYTSIFNLVYNVFI 136 Clostridium acetobu...
15896202  79 VLVLFSKFAYMKVNDAQKgISKFVTVFSNSGFMG----------YP---------VLRSIYGENGVFYCAIFGIILNLFM 139 Clostridium acetobu...
15673902  14 LGKFIGRKATVEERG----LYMFDLSGYNIGNFS----------IP---------FVSSFFPAAIPFLAMFDMGNSLMVT 70  Lactococcus lactis ...
20094996  79 IGFAVARKMARDRRD-AM-AVALASGLGNTGFLG----------YP---------VCLSTFGEPGLEAAVFYDFGTT--L 135 Methanopyrus kandle...
15927838  72 AKMIAVWFFRKYDNHMRG-SVGMMTGAMNIGLFA----------YP---------LIEVIWPKTGLIYFGMADIGGAFVM 131 Staphylococcus aure...
3183308   95 LISFLLAKLFRLTPRQRN-FATACITFQNSNSLPlalvsslattVKdllwdkipdDTPDKVASRGIMYLLIFSQLGQALR 173 fission yeast
15643001  68 LAFLFFSRIKDPRVRIP---IILSFVGFNTGLFM----------YP---------LAESLWGEASVVNFALFDLGNSFFI 125 Thermotoga maritima
1730590   88 TGALFTTFATTVPKKFFW-GLIFAGFFPNISDLPiayiq-smgnGS---------IFTAEEADKGVAYSCIFLFIQSFLM 156 baker's yeast
6324666   89 GFAFIVRSVLPVPKRWRG-GILAGGMFPNISDLPiaylq-smdqGF---------IFTEAEGEKGVANVIIFLAMFLICV 157 baker's yeast
1730754  158 FNLGGFRLIESDFEYNd--------------------------------------------------------------- 174 baker's yeast
15893657 137 WTIGIVIINDKREKID---------------------------------------------------------------- 152 Clostridium acetobu...
15896202 140 FSYGIMALKNTKGNS----------------------------------------------------------------- 154 Clostridium acetobu...
15673902  71 GTTQAIVELSSGRKKHg--------------------------------------------------------------- 87  Lactococcus lactis ...
20094996 136 SVIAAYLMLSSRRENP---------------------------------------------------------------- 151 Methanopyrus kandle...
15927838 132 FGITYFVGSYFSEGSDq--------------------------------------------------------------- 148 Staphylococcus aure...
3183308  174 WSYGYRILLSPNQPEDplpignrswshsdvneeeiqnllassanvdgvqnsvqanegstvqtdssaiskndnvqvetsne 253 fission yeast
15643001 126 FGVGKAVAEQNKKGIL---------------------------------------------------------------- 141 Thermotoga maritima
1730590  157 MNFGMWRVVGLDFRDT---------------------------------------------------------------- 172 baker's yeast
6324666  158 FNLGGFRLIENDFHYKgd-------------------------------------------------------------- 175 baker's yeast
1730754  175 ----------dESAVRVSETTKTQPAVSANTTNTDTSERF-----FSNEQql-fnNKYTARDSLTEAIGTKGENADVPPI 238 baker's yeast
15893657 153 -----------------YKKILFNHNIIAVIVGVFLMLLS-----IKIPY-----VMSSAFNLIGSMTAPLSMIVIGSIL 205 Clostridium acetobu...
15896202 155 --------------LKELKRAAVNPSIIATVIGFFIFILK-----IKLPH-----LIALSINSVGSMTSPLSMIIVGIML 210 Clostridium acetobu...
15673902  88 -----------FILQEIFGVLFRNPPFVVYIFMFILAIFG-----LSFPD-----EWLIPIRPLANANTLLSIFTIGLFM 146 Lactococcus lactis ...
20094996 152 -----------------LKMSLRFPPAHAAVAGMCWAALG-----LHLPD-----TIRSTLQLLGRSVVPVIMVSLGASL 204 Methanopyrus kandle...
15927838 149 -----------FDFKYLGKKLLQSVPLVTYIVMFILNINH-----IHLPH-----VAIDFFSILSHANMPLSMILLGVML 207 Staphylococcus aure...
3183308  254 evggfgaasskISKFIVLLLDFFSPPLYSLFIALFIAVVPplqrfFFEEGsfvegSITSGIRMAGQVAVPMILVVLGASL 333 fission yeast
15643001 142 -------------------KVFTFPPFLFLLVGITMNSLK-----VVPPG-----IVLDVARTIKNANAFLVFFLVGYYL 192 Thermotoga maritima
1730590  173 -----------KEPDSENITPSVSPAIDDRKLTEITKLPN-----ITRPT-----NAYQSEDARSNSDLSCNSITTNEMT 231 baker's yeast
6324666  176 ---------ddEENTLTNDDSAQQPTQPIEGNSSSSSNQD-----ILKEPn----ESTVPNSSQASYISEKNK-KEKTEL 236 baker's yeast
1730754  239 SR---------RSTNSIAPLSLPDTSSNSKITKPVQVKArntiactqseesqatrgSNPLDSqssastihsyntseSYES 309 baker's yeast
15893657 206 AGv--------DFNDIFKDWSLYYIAILRLIIIPLIIYF-----------------ALKPFQ--------------INKI 246 Clostridium acetobu...
15896202 211 ADi--------NLSDLFKDKLVYILTIVKLLIVPAITFV-----------------VLKLLN--------------ANQT 251 Clostridium acetobu...
15673902 147 EF----------RLPKGKFKTCLKNMTWRYLLAFILASL-----------------VYFFLP--------------FPAI 185 Lactococcus lactis ...
20094996 205 RW---------D-LPKSVISVIPTVWVVKLCASPVVAAT------------------IAPSG--------------LDGK 242 Methanopyrus kandle...
15927838 208 NF----------TLERKYIPATIKYLCLHYGLALVAGLL-----------------VHVLLP--------------VSDD 246 Staphylococcus aure...
3183308  334 ATdiskteptqEVRKNNDTRVIIVCLLGRMVVVPLALLP-----------------AFSLLSyf----------seISTV 386 fission yeast
15643001 193 SF----------RSVYEKFRLILMAGLVKYAAGLLVALI-----------------AVKIFS--------------LSSF 231 Thermotoga maritima
1730590  232 PQ---------AFYEGFTGYIKPYKES-NGASHKFESDLp----------------HAEIYR--------------VSST 271 baker's yeast
6324666  237 SV---------PKPTHTAPPAIDDRSSNS--SAVVSIDSith-----------slrTNHVDAqsv---------seLNDP 285 baker's yeast
1730754  310 SI--DTMRARRtaSQPRAYNTTTLLEEncldekCPKNMSMAALEPIRSIDMRALPS-QNIHHLIREY 373 baker's yeast
15893657 247 VIg--VIIICE--AMPGGTLCPILAKS------CNRNFKYASKIVLITTILSMMTIpFMTLFLKI-- 301 Clostridium acetobutylicum
15896202 252 VIg--VIVVLE--AMPAASNAAVMSLQ------YGSDENVALKHIFITTVLSIIIIpLVIKLVV--- 305 Clostridium acetobutylicum
15673902 186 IK--EILLLIF--FCPMSFLHMIQAIE------LGNDKALAGLTISLSMFISLILMsIIVIIL---- 238 Lactococcus lactis subsp. lactis
20094996 243 -----VAVLEA--AMPPALMNLVLAEL------LGLRPHVTAALVFSTTVISLATVpTVIYLVSGGG 296 Methanopyrus kandleri AV19
15927838 247 MI--KTTLLVTw-MFPVGVAIISYGIQf-----KYRTLPFIGMTTNLTIIISIIILyVYQAVFV--- 302 Staphylococcus aureus subsp. aur...
3183308  387 DDpvFVVVIFLlvGSPTAIQLTQICQLngv-feRECAKVLWWSYAVFTPPNSLLLAfASLLVVKWTK 452 fission yeast
15643001 232 EE--MNLFLSP--LLPSAIMTLVYSVE------KGYDAELASGLITFFTIVSTSIImAVNYTWG--- 285 Thermotoga maritima
1730590  272 YSspGALEFSRidGSSLSYSRISKNSDg----rSYRRKRKADMNELISKYSAAEKIrQGELDLSRPL 334 baker's yeast
6324666  286 -----TYRTR---SQPIAYTTESRTSH------VHNNRRNSITGSLRSIDMRELPA-EGMSDLIREY 337 baker's yeast
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