Conserved Protein Domain Family
LplB

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COG4209: LplB (this model, PSSM-Id:226666 is obsolete and has been replaced by 443357)
ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism]
Statistics
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PSSM-Id: 226666
Aligned: 14 rows
Threshold Bit Score: 380.872
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
15614675  24 PPKTPAGKPTGIKLFFKkcyEQKALLLMSLPFLIWLIIFRYVPLYGWSIAFQDFRP-----ARPIFDQDWAGFKHFTFLF 98  Bacillus halodurans
15891904   1 MKQDFQGRLHDLQEDVR---RDWQLYLLLAPMLIWFAVFLYKPMYGLVIAFQDFSI-----FRGIEKSPWVGFANFVELF 72  Agrobacterium tumef...
15613047  17 PSIPKKVRRQQKLKRIF---RNKYLYLMILPGLVYFLIFKYVPMWGLIIAFQDYQP-----FLGVTGSEWVGFKHFERLF 88  Bacillus halodurans
15613628   9 NAKTVERKLKKQKWNFR---RTWQLHVLLIPALVLALIFQYGPMFGIVMAFQDYKP-----WLGFTGSEWVGLQHFITMF 80  Bacillus halodurans
15614474   9 HSKIRVQRRKKILTTLK---QQKYLYLMSLPFVAWVLVFNYFPLWGWTMAFQNFRP-----GLSFFEQEWVGLQHFIELF 80  Bacillus halodurans
7676158   11 P-VLTAGKGISWMAALK---RDKWLYLLLIPGLLYFLIFKYLPMWGVLIAFKDYSP-----YLGFWKSEWVGFDYFKDFF 81  Bacillus subtilis
16080066  11 VDAVIFKKEKRKRLLIKl-iQQKYLYLMILPGCIYFLLFKYVPMWGIVIAFQDYQP-----FLGILGSEWVGLKHFIRLF 84  Bacillus subtilis
16080065     --------------------------------------------------------------------------------     Bacillus subtilis
15900033   2 DIKIKREEIMKK--FSKtlrDNWIFLLMVLPGALWLILFFYIPVFGNVVAFKDYHMtsngfIDSIINSKWVGLDNFRFLF 79  Streptococcus pneum...
15675480   1 ----MIRQTNKKTSFWKnviKYRALLLMVLPGFIWFIFFFYIPVLANVVAFKDFHYsaggfMESLKESPWVGLANFKYLF 76  Streptococcus pyoge...
15614675  99 TDPRFFEVLRNTLAMSLINLVLGFVTAIGLAILLNELRNLTFKRVVQTISYMPHFLSWVVAAGLVSAALSIENGIINIVL 178 Bacillus halodurans
15891904  73 RNDMFVRSFWNTITISGLGLIFAFPVPIILALMFNEVQNGTARSWAQTVVYLPHFISVVIVAGIVINFLSPSIGIVNLML 152 Agrobacterium tumef...
15613047  89 TEPTFFQLLRNTLVLFLYNLIFFFPVPIILAVLLNEIRLMVFKRFVQTMIYIPHFMSWVIVVSLTYVLFTTDGGVINEII 168 Bacillus halodurans
15613628  81 EYDYAKQVIWNTLVISVLKMIFGLIVPIIVALLLNEMYQMVVKRTVQTIIYLPYFLSWVILGGILIDVLSPDGGIVNQAL 160 Bacillus halodurans
15614474  81 QDNRFYLVLRNTLAMSIMGLIVGFTMPILFAVLLNEVRHMVFKRTVQTVSYLPHFVSWVVVAGIVTKMLSIDGGIVNQLL 160 Bacillus halodurans
7676158   82 MNPDFFRLLRNTLMLASLDLLFAFPAPLILALLLNEVRKAVYKRCIQTFIYVPHFVSWTIVVSITFVFFTVDTGVINKLI 161 Bacillus subtilis
16080066  85 TEPTFFLLLKNTLVLFALNLAIFFPVPITAGASIERSADCSL-------------------------------------- 126 Bacillus subtilis
16080065   1 --------------------------------------------------------------------------MINELI 6   Bacillus subtilis
15900033  80 SSRDAFIITRNTVLYNLGFIFLGLVVSVGIAIILSELRSKRMVKIFQTSMLFPYFLSWVIISFFTDAFLNIDKGVFNHLL 159 Streptococcus pneum...
15675480  77 ASKDAWLITRNTIAYNVIFLLFNVFFAIAFAIIMSELRNKRTVKVYHTMSLLPYFLSWVVIEYFVSAFLNTDKGFINQLL 156 Streptococcus pyoge...
15614675 179 MKLGMisEPIMWLGVGEYFWGIIGASDVWKNVGWNTIIYLAAITMIDTEQYEAAEIDGATRLQRIWYITLPGMRPVIVIL 258 Bacillus halodurans
15891904 153 KGLGF--EPIYFLTQPEWFRPVYIGSSVWKEAGFESIVYLAAIAGVSPTLYESARVDGASRWQMMWRITLPCILPTIVIM 230 Agrobacterium tumef...
15613047 169 YSITG--KNVNFLMSEDWFRPLYILQVIWREAGWATIIYFAAIAAIDPSLYEAAKMDGANRFRQIWHITLPAIRSVIVVL 246 Bacillus halodurans
15613628 161 GLFGI--DPIFFLGSNDWFRTTVVISDLWKETGFNTIVFLAAITAVNPNLYEAAVVDGANRWKQTLHITLPAMLPIIIVV 238 Bacillus halodurans
15614474 161 MAFGFvdQPVQFMAKGEWFWVIVTLSDLWKEMGWNSIIFLAAMAGIDPQLYEAAKVDGASRWRQIWHITLPGIRPTILVI 240 Bacillus halodurans
7676158  162 MSLTG--EQISFLSDADWFRPMIVMQSIWKETGWGTILFLAALATVDQEQYEAAIMDGAGRFRRMWHITLPAIRSTIIVL 239 Bacillus subtilis
16080066     --------------------------------------------------------------------------------     Bacillus subtilis
16080065   7 VFFGG--EKINFLLNEEWFRPLYILQVIWREAGWSTIIYLAAITAVDPQLYEAAKMDGAGRLRQMWHITLPAIKSVIVVL 84  Bacillus subtilis
15900033 160 ESLGL--KEVNFYADLGIWPYLLLFLGIWKGFGYSSVMYYATIMGIDPTYYEAATVDGASKWQRIRNVTIPQLTPLVTVL 237 Streptococcus pneum...
15675480 157 TGSGA--DPIKWYSNPTWWPLILLFMSVWKGLGYNSIIYYASVKGISDTYYEAAMVDGASKWQQIRNITIPQLLPMMSIL 234 Streptococcus pyoge...
15614675 259 LIMNLGYILESGFEAQYLLMNPMN--MDFAENLDIFVLRYGINMGNFSLATAAGIFKTVVSFIFLFSANHIAKRLGE-AR 335 Bacillus halodurans
15891904 231 LIIRIGNLVEVGFEYIILLYRPST--YETADVVSTFIYRTGLQGTQYDLATAAGLFNAVIAFVLVYSANRISRKVSS-TS 307 Agrobacterium tumef...
15613047 247 LILKIGDILELGFEHVFLMLNAMN--REVAEIFDTYVYTAGLKEGQFSYSTAVGFFKSIVGLIMVMLANWLAKKFGE-EG 323 Bacillus halodurans
15613628 239 ATLSLGNILNAGFDQIFNLYNPLV--YQTGDIIDTYVYRVSLVNGDFSYGTAVGLFKSLISLVLIIIGYRLAYKYAN-WR 315 Bacillus halodurans
15614474 241 LILSIGHLMAIGFEKQFLLGNPLV--VDYSEVLDLYALNYGLGLGRYSYGTAIGIFNSVVCIILLFLANGIFKRFTN-QS 317 Bacillus halodurans
7676158  240 LILRIGSFLNLGFEQVYLMTNSLN--RSVADIFDTYVYMMGITQGAYSYSTAVGLFKSVVGIILIFGANYIAKKFDQ-EG 316 Bacillus subtilis
16080066     --------------------------------------------------------------------------------     Bacillus subtilis
16080065  85 LILKIGDTLELGFEHVYLLLNATN--REVAEIFDTYVYTAGLKQGQFSYSTAVGVFKAAVGLILVMLANRLAKKFGE-EG 161 Bacillus subtilis
15900033 238 TILAVGNIFRADFGLFYQIPHNAGqlYNVTNVLDVYVFNGLTQTADIGMAAAAGLYQSVVGLILVILSNLLARRVDPnSA 317 Streptococcus pneum...
15675480 235 LIINIGNIFKSDFGLFYVIPKNSGplYDVTSVLNTYVYNALTATGDIGMASAASLYQSVVGTSILLVTNAIVRRMDPdAA 314 Streptococcus pyoge...
15614675 336 LF 337 Bacillus halodurans
15891904 308 LW 309 Agrobacterium tumefaciens str. C58 (Cereon)
15613047 324 VY 325 Bacillus halodurans
15613628 316 IF 317 Bacillus halodurans
15614474 318 VM 319 Bacillus halodurans
7676158  317 LF 318 Bacillus subtilis
16080066     --     Bacillus subtilis
16080065 162 IY 163 Bacillus subtilis
15900033 318 LF 319 Streptococcus pneumoniae TIGR4
15675480 315 LF 316 Streptococcus pyogenes M1 GAS
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