Conserved Protein Domain Family
TnpB_IS66

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pfam05717: TnpB_IS66 
IS66 Orf2 like protein
This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition.
Statistics
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PSSM-Id: 461723
Aligned: 157 rows
Threshold Bit Score: 99.8562
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_011765760     2 YSEAVDMRKSIDALAQLVASC-MGMDPLSGQ-VFVFIGRRRDKVKLLVWDRHGFWVLYKRLERGRFADPArlAAGALaMS 79  Azoarcus olea...
jgi:Sph21_4929  13 YDGHCDMRKSFDGLCGLVISV-MNRQPTSGE-VFVFLNRSRTHIKLLHWEHGGFVLYYKRLEQGTFG------TSSLkKG 84 
jgi:Echvi_3898  13 YRSPVDMRKGFNGLSGIVTNE-LDRDPVSGE-VFVFVNRHRNLIKLLHWEKGGFVVYYKRLEKGTFLLP----EDRG-DG 85 
WP_022054427    13 FNGNVDLRKGIFRLCESIRED-MSLDPSDASnVYMFMSRNRKVVKILHYERGFYVLYEKRPVMGRFKKPVfdEVSK--CY 89  Bacteroidaceae
WP_022233133    13 CPGRTDMRKGISSLCGVVHEK-MNSEVKNGD-VFIFIGSSRRLMKLLHAEDGGMVMYVKRLEAGRFKLPEydPQSN--SY 88  Bacteroides m...
WP_004294670    13 CPGYTDMRKGMFTLCGLVHER-MGGDIRSGD-VFIFYNRFRTKIKLLHAEPGGLVLYEKLLEEGTFKIPAydPATR--SY 88  eubacteria
jgi:Odosp_0528  13 CPGSTDMRKGMFSLSGLIREK-MNGDVRNGD-VYIFINRLKNRIKLLHAETGGLVMYEKLLEEGTFKIPAydPETH--SY 88 
jgi:Cycma_1560  13 YDKPTDMRFGINALSGLVRNK-LGFDPMNGD-VFIFIGKRGNQIRLLQWDKDGFALYIKKLERGTFERP-----ILT-GT 84 
CDC63958         2 CQQPVNMRKGIDALFNLIQSE-SPLSPMTGD-VFVFFSRNRQSVKLLRWDTDGFLLYQKRLEKGSFEQPRlnPSTG--YY 77 
wustl:BV1290    13 YQGFVRMNLGIDGLFKIIRSQmKELSPISGD-IFLFFGKNRQSVKILRWDGDGFLLYYKRLEGGSFELPTfnPHTG--NY 89 
WP_011765760    80 ELAMSELVAWLDGIDLARVR 99  Azoarcus olearius
jgi:Sph21_4929  85 ELSWSDLVLLIEGVQVVKCI 104
jgi:Echvi_3898  86 VLDWPELVLMVAGIQVEGYR 105
WP_022054427    90 RIQWSDMAYLTESIVVDKMy 109 Bacteroidaceae
WP_022233133    89 PMEWRDLVMMVEGIQENPQQ 108 Bacteroides mediterraneensis
WP_004294670    89 PMTWSDLVVMVEGINEDVSK 108 eubacteria
jgi:Odosp_0528  89 PMTWSDLVIMVEGINEDKRK 108
jgi:Cycma_1560  85 AITSTQLSFLLQGVRLESVR 104
CDC63958        78 ELSWETFSLIMSGISLDSVR 97 
wustl:BV1290    90 EISYQVLSFILNGVSLKSVR 109
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