Conserved Protein Domain Family
Pox_int_trans

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pfam05718: Pox_int_trans 
Poxvirus intermediate transcription factor
This family consists of several highly related Poxvirus sequences which are thought to be intermediate transcription factors.
Statistics
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PSSM-Id: 283396
Aligned: 9 rows
Threshold Bit Score: 577.005
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q9Q8W5   1 MDRLFEQLRSIEDNYSRTIFNFHLVSNKDVSDVYPKMRELISNETLFDRIVTVDSIKNSIKKIIYCDIHLTKHIINSDAY 80  Rabbit fibroma virus
Q8V3I4   1 MKDLFIFLHDIENTYSRTIFNFHLIKDDTIGDIYKKIKDIISVENLFDNIVKTDDVKKCIKKLVYCDIHITKHVINPLVY 80  Swinepox virus
Q08FM8  11 MYDLFNFLYEIECDYSRTIFNFHLMKNDGISDIYGKMKELISNETIFNNVVKTEYIRSHIKKLVYCDINITKHIINNNVY 90  Deerpox virus W-848-83
Q6TUQ4   1 MDELFYFLTTIEDDYSRTIFNFHLVKSGDVCNIYDTMKNKISSETMFEDIVKCDDVRRNIKKLVYCDIHITKHIINQSLY 80  Yaba monkey tumor virus
Q80HV2   1 MDNLFTFLHEIEDRYARTIFNFHLISCDEIGDIYGLMKERISSEDMFDNIVYNKDIHPAIKKLVYCDIQLTKHIINQNTY 80  Vaccinia virus WR
Q9J545   1 MYELFSYLHEIEDEYIRTIFNFHIKKCDEISNIYNIIMTKIKDAKNFNDVID-ERFNKTIKKLIYCDIKTTKHIINQSCY 79  Fowlpox virus
Q98295   1 MEPLLRYLHSVEDRYVRTIFNFHIRHVPDVPAIYEPIKARIAGTQLFHEVVPDVHARAGIKKFIYCDIHMTKHILNHAAY 80  Molluscum contagiosum...
Q6TVM0   1 MLALFEFLRSVEDCYRRTIFNFHIAHSAEAGDVYGVLRDRILAATRFEEVAP-PGLADALAKVVYCDISTTKHLVNHAAF 79  Orf virus
Q070A5   1 MESLFERLDAVHPRYVRTIFNFYVRHAPEVATLYPALRDRIVASTRFAEVVDDPDVAAAVKKYIYCDISLTKHILNTACD 80  Crocodilepox virus
Q9Q8W5  81 Pt--HDNTNASSNYSkiaQFFDIKTNNDE--ISMRTAYIFERDKSSLVSYIKTTNKKRKIDYGEIKKTIH-STRSfLSYF 155 Rabbit fibroma virus
Q8V3I4  81 Hi--NEKNKSNCKCS---QFFDINTCNDN--ISTMTAKIFDHDKSSLVSYIKTTNKKKKIDYGEIKKTIHgTKTS-CNYF 152 Swinepox virus
Q08FM8  91 DnivTKRSNHNFKCS---QFFDIKSGTDK--LSLSTVKIFEHDKSSLVSYIRTTNKKRKVDYGEIKKTVHgSSKT-PNYF 164 Deerpox virus W-848-83
Q6TUQ4  81 Pv--YNVGNVFNKYS---HFFDINSSQSD--VSLRTVEIFERDKSSLISYVKTTNKKKKVDYGEIKKTVYgSGKNfLNYF 153 Yaba monkey tumor virus
Q80HV2  81 Pv--FNDSSQVKCC----HYFDINSDNSN--ISSRTVEIFEREKSSLVSYIKTTNKKRKVNYGEIKKTVHgGTNA--NYF 150 Vaccinia virus WR
Q9J545  80 P----TKNKQIKKISkinQYFDINIISDTp-ASKRTKEIFLSDRSSLVSYIKTSNKKCKIDYGELKKTINsHNRS--IYY 152 Fowlpox virus
Q98295  81 A----QGAADAGRAHkmaQHFDVVLAPGA--DSARTRDIFLRDKSSLLSYIKTTSKKSKIDYGEIKKTIHcAGGGaAGYY 154 Molluscum contagiosum...
Q6TVM0  80 A----ARARSARRGGslaQFFDVHVGEDA--ESRRTAEIFDRERSSLVSYVKTTAKRCKIDYGEIKRTIHgGRQT---YF 150 Orf virus
Q070A5  81 A---SGGGDCVGKPRkerRFFRVIIDEASgrGAERTRDLFLSDASSLFSYVKTIEKKPKINYGEIKRSLTnSGYR---FY 154 Crocodilepox virus
Q9Q8W5 156 SGKKSDDYLSTTIKSTEcQPWIKTISKRMRIDIVNNAIVTKGKSSILQTIEIVFTNRTCVKIFKDSTMHIILSKDKNEKD 235 Rabbit fibroma virus
Q8V3I4 153 CGKKSDDYLVTTIKTTN-KPWIKTMSKRMRIDIINNAIITKGKSSILQTIEIIFVNRTCVKIFKDSTMHIILSKEKMEQG 231 Swinepox virus
Q08FM8 165 SGKKSDDYLITTIKSVNsQPWIKTITKRMRIDIINNSIVTKGKSSILQTIEVVFVNRTCIKIFKDSTMHIILSKDKMETG 244 Deerpox virus W-848-83
Q6TUQ4 154 SGKKSDEYMSTTVRYDNtNPWIKSVSKRMRVDIVNNAIITKGKSSILQTIEIVFLNRTCVKIFKDSTMHIILSKERRELG 233 Yaba monkey tumor virus
Q80HV2 151 SGKKSDEYLSTTVRSNInQPWIKTISKRMRVDIINHSIVTRGKSSILQTIEIIFTNRTCVKIFKDSTMHIILSKDKDEKG 230 Vaccinia virus WR
Q9J545 153 SGRRSDEYMSTEVHKDQkNPWIKSISKKLTLDIENQSITTRGKSSILQTIEIIYVNRTCIKIFKDSTIHVILSKDKSETN 232 Fowlpox virus
Q98295 155 SGRRSDEYLSTTVCVDSaRPWIKSVSKRLRVDIARHAIVTRGKSSILQTIEVIYVNRTCVKIFKDSTVHVILSKDKAERR 234 Molluscum contagiosum...
Q6TVM0 151 SGRRSDDFLSTTVRADPsKPWIKSISKQLRVDILHHAICTRGKSSILQTIEVVLTNRTCVKIFKDSTMHIILSKDDRERG 230 Orf virus
Q070A5 155 SGRKSDGFCSTTVSCQRdKPWIKSVRKELVVRVLDESILTRGKSSILQTIEVALKDKTCVKIFKNSTVHVILSKDDDETD 234 Crocodilepox virus
Q9Q8W5 236 CVGVINKLFEVYKVLFYLLYSVVQNEAFLEIYSHSQTIITLETFEEKINKIKDVR--RCYGVYNFKVGMFNLMFNKPIEY 313 Rabbit fibroma virus
Q8V3I4 232 CIGLIDKLFNVYQILFRLLYDITHDDMLDTISNYYKDITDLDVFEDKINKIDNMK--TIYGINNFKVGMFNLTYNYPITH 309 Swinepox virus
Q08FM8 245 SIGIINKLFKVYEILFHLLHDITNETIFKKIFDISLTVLSATTFDEKMNQIKINE--HEYGISNFGIGMFNLTYIKPINF 322 Deerpox virus W-848-83
Q6TUQ4 234 CVGLIDKLFSVYKILFLLLYTVTKQKEFSIIYNTSNEIMTSNSFEDKIKIIKSKK--DDYGIKNFKIGMFNLTFTKPIPY 311 Yaba monkey tumor virus
Q80HV2 231 CIHMIDKLFYVYYNLFLLFEDIIQNEYFKEVANVVNHVLTATALDEKLFLIKKMAehDVYGVSNFKIGMFNLTFIKSLDH 310 Vaccinia virus WR
Q9J545 233 CVDTINKLFDTYSILFDLITDITGNEKFLEYKAVASDIVSTDNFNEKILIIKKHP--NMYGIHNFKIGMFNITYKLSIDM 310 Fowlpox virus
Q98295 235 CVDLVDRLFGTYRALFALLHALTQHAPFRAHAAAADAVLAAPGFDEKLALIRAHA--HMYGVHNFRVGMFNLTYTPHIAF 312 Molluscum contagiosum...
Q6TVM0 231 LADLADKLFGTYATTFRVIAAITGNACFAAVADAAARVVALPDADAKLEAVRGLA--DCYGVRNFKIGMFNLTFTGAIEH 308 Orf virus
Q070A5 235 VAGLVDKCFRTLRVLYGIAHAVTGDPRFPRHAADAARVMAAGTLREKLAAVARHR--ENYGVRNFGVGIFNLMRAAPLGC 312 Crocodilepox virus
Q9Q8W5 314 TVFPSLLvHGGSKIKFFKGKKLNIVALRSLEECVRYIELTESIMKKMEERSAILNGLNIETVDVDELKNLL 384 Rabbit fibroma virus
Q8V3I4 310 TVFPSLL-GNDNKIKFFKGKKLNIVALKSLSDCRTYVELANSIIKNMSHRSEILDNLNIESVSIETLKELL 379 Swinepox virus
Q08FM8 323 TVFPSLL-EDNNKIKFFKGKKLNIVAIRSLKDCKYYVSLSNSIMKNMEERSNILNEINIESVCIEKIKELL 392 Deerpox virus W-848-83
Q6TUQ4 312 TVFPSLL-DNGSKIKFFKGKKLNIVAIKSVNDCKKYVRISNHMLKTMLDRSNILHNLNIESASVDQLKSLL 381 Yaba monkey tumor virus
Q80HV2 311 TVFPSLL-DEDSKIKFFKGKKLNIVALRSLEDCINYVTKSENMIEMMKERSTILNSIDIETESVDRLKELL 380 Vaccinia virus WR
Q9J545 311 IIFPSLM-EFNSKIKFFKGKKLNIVALSSLQDCIKYVKEAKGILCMMKKKSEELEEIDIITASVDRLKNVI 380 Fowlpox virus
Q98295 313 TVFPSLL-DHKSKIKFFKGKKLNIVALSSLQECAYYVGCAEALLRTMQLRSERLDATDVLAASVEELKELL 382 Molluscum contagiosum virus su...
Q6TVM0 309 TVFPSLI-PAESKIKFFKGKKLNIVAVRSTEEGRECVEQAQALLAAMRERSARLAAADVATASVDFLKELL 378 Orf virus
Q070A5 313 TIFPAAV-RPGTKVKFFKGRKLNLVALTSPEDCARQVAEAERLLDEFARKSRVLESVAVEKLSVDEIKSIL 382 Crocodilepox virus
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