1YIT


Conserved Protein Domain Family
Ribosomal_L27A

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pfam00828: Ribosomal_L27A (this model, PSSM-Id:395666 is obsolete and has been replaced by 459951)
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Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
This family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins.
Statistics
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PSSM-Id: 395666
Aligned: 483 rows
Threshold Bit Score: 29.3933
Created: 22-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1YIT_L             25 AGHRGGRGDAGRDKHEFhnHEp-----lGKS----------GFKrpQkV--------Q-EEaATIDVREIDENVTLLAAd 80  Haloarcula...
jgi:Cyan7425_1309  27 QGASGGFGMRGQKSRSG--RPtrpgfegGQNplyrripklkHF---PlIn------rQ-QY-TTINVGSLNNLPAGT--- 90  Cyanothece...
Q8DML6             27 QGASGGFGMRGQKSRSG--RPtrpgfegGQNplyrrlpklkHF---PlVk------rK-VY-TTINVGRLNTLPANS--- 90  Thermosyne...
Q46IS6             29 QGASCGFGMRGQKSRSG--RPtrpgfegGQMplyrrvpklkHF---PiVn------qK-NF-TVLNVSRLNALKDGT--- 92  Prochloroc...
Q7V9X9             30 QGASCGFGMRGQKSRSG--RPtrpgfegGQMplyrrvpklkHF---PlVn------sK-SF-TLINVASLNSLKEGS--- 93  Prochloroc...
WP_015079196       27 QGASAGLGMRGQKSRSG--SGtrpgfegGQQplyrripklkGF---PlMn------rR-IY-TTINVEKLNDLPANS--- 90  Nostocales
Q2JIL0             27 QGASCGKGMRGQKARKG--GStrpgfegGQTplyrrlpklkHF---PrYr------rRlEY-TLVNLRALADLPAGS--- 91  Synechococ...
EDO07955          311 kGGSSGRGCKGQKHRSgryvn--pvfegGQMplyrrlpkfvG----RpVgpghrhgrK-KY-ELIPIHQLNVAKDGTVVd 382 Babesia bovis
CBJ29509           91 QGASCGFGMRGQKSRSG--PGvragfegGQQplyrrlpklvGRPmgPgHt------kK-QF-NLIKLDALNGLDEGA--- 157 Ectocarpus...
XP_002286876       25 QGATCGFGMRGQKSRAG--RPtrpgfegGQQplyrrlpkfaGQPtgPgHe------kE-AY-NLIKLDELNSCAEGS--- 91  Thalassios...
1YIT_L             81 dvaevedggfRVDVRDVveea----ddaDYvKVLGA--GQV----Rh-E-LTLIADDFSEGAREKVEGAGGSVEL 143 Haloarcula mari...
jgi:Cyan7425_1309  91 ----------VVSLSSLidagiittddgPL-KVLGD--GDL----Tv-K-LQVEAAGFTQAAEAKITAAGGSCTV 146 Cyanothece sp. ...
Q8DML6             91 ----------VVTVQSLleagilttakyPL-KVLGD--GEL----Nv-K-LEVHAAAFSGSARSKIEAAGGVCVE 146 Thermosynechoco...
Q46IS6             93 ----------IVNLDLLvkegiltkpknPL-KILGN--GKL----Ev-K-LTVQAAAFTASAKNKIEEVGGSCEL 148 Prochlorococcus...
Q7V9X9             94 ----------TVNLDSLvktgivtspkyPL-KVLGN--GNL----Kv-K-LVVQAAAFTASAKTKIEGAGGSCEV 149 Prochlorococcus...
WP_015079196       91 ----------EVTLESLkaagilttvkgQL-KILGN--GEL----Nv-P-LQVKAAAFTGQARIKIEAAGGSCEA 146 Nostocales
Q2JIL0             92 ----------EVSLESLmergivttndgPL-KILGD--GEV----Sv-P-LTIRAAAITASAKVKVEAAGGRVEI 147 Synechococcus s...
EDO07955          383 ----------WATLECLgarlgrykrghPIkVVGGKkyGGVaeplTarN-LIVKAHAFTKSAAKEIYQMGGRCFL 446 Babesia bovis
CBJ29509          158 ----------TVNFESLraagkvtktkhRWhKVVGG--MELe---Tt-G-LTVQAHGFTKSAVEAIEAKGGKCQL 215 Ectocarpus sili...
XP_002286876       92 ----------TVNFDALfeskavtkakySIhKVVAG--REDf---Ta-KgVTVQAHAFTQSARDAIEGAGGKAVL 150 Thalassiosira p...
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