Conserved Protein Domain Family
DUF3300

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pfam11737: DUF3300 (this model, PSSM-Id:403055 is obsolete and has been replaced by 463336)
Protein of unknown function (DUF3300)
This hypothetical bacterial gene product has a long hydrophobic segment and is thus likely to be a membrane protein.
Statistics
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PSSM-Id: 403055
Aligned: 39 rows
Threshold Bit Score: 245.264
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q8ZRS9              60 TTAQIDQWVAPVALYPDALLSQVLMASTYPANVVQAVQWSRDNPTLQGDAAIQAVASQPWDPSVKSLVAFPQLMALMGEN 139 Salmonell...
CASKLGSI:C427_5146  43 DQAQLDQMLAPIALYPDTLLSHILVASTYPLEVIQAARWRAVNTDLDEQQALNAVEDKGWDPSVQALVPFNDLLQKLSED 122 Paraglaci...
WP_011761418        43 SEAELARLLAPIALYPDTLLTHILIASSYPLEVVEAQRWREKNRKLGDKKLMDKAEKQGWDPSVTALIAFPNVLERMSDD 122 Shewanell...
WP_011866494        37 SDAELAQMLAPIALYPDSLLTHILIASTYPLEVVQANRWRNKNKSLEGAEAVNRAEKKDWDPSVTALVAFPDLLQRLSDD 116 Shewanell...
WP_013052477        43 SEAELAQMLAPIALYPDSLLTHILISSTYPLEIVQAKRLQSKNKLLPIEQLMHKAEDQDWDPSVTALLAFPTVLDKLSED 122 Shewanell...
Q12PS8              52 SQGQLAQLLAPIALYPDTVLTHVLISATYPLDVVQAERWHSQRQGMDQNALMSSAEAEPWDPSIKALLAFPSLLQKMSQD 131 Shewanell...
Q085T2              44 SDAELAQMLAPIALYPDSLLTHILIASTYPLEIVQAKRWLANQGNRDTNKIMTEVESQDWDPSVKALVAFPNVLERLNDD 123 Shewanell...
Q8E8L4              41 SQAELEQMLAPIALYPDSLLSHILIASTYPLELVQAQRWLEDHPKLSVEQVMSRTEDKGWDPSVKALMAFPNVLQKMSED 120 Shewanell...
Q485X9              44 SEAELAQTLAPIALYPDTLLTHILIASTYPIEVIEAERWLNKHSKLTAAQIERKAKKKDWDASIKALLAFPRVITKLSED 123 Colwellia...
WP_015820267        30 SDGELDALLAPIALYPDTVLSHLLIAATYPLEVVDAERWARNQKNSDRAEILNQAATKNWDPSVQALTPIPEILARMSED 109 Teredinib...
Q8ZRS9             140 PQWVQNLGDAFLAQPQDVMDAVQRLRLLAQQTGSLKSTPQQTVTSVpkssastavttttttsastpatpSTVIKIEPANP 219 Salmonell...
CASKLGSI:C427_5146 123 LDWLQSLGSAFLVNEQQILTSVQNLRQKAYEQGNLTANDYVNIQQE-----------------------QGEIVIETVRK 179 Paraglaci...
WP_011761418       123 LNWTRDLGDAFLADEEAVLDSIQMLRREADRAGNLDGGDNLVVKRQ-----------------------PTQIIIESPSP 179 Shewanell...
WP_011866494       117 LEWTQKLGDTFLQDEERVLDSIQSLRQQAERANAFDDMENMKVTKV-----------------------NRQIVIEPVQR 173 Shewanell...
WP_013052477       123 LEWTQDLGDAFLQDEEKLLASIQTLRHQADAANSLAEMENMSVSRV-----------------------DNQIIIEPIQQ 179 Shewanell...
Q12PS8             132 LAWTQALGDAFIQDEARVLDAIQVLRQQAYDADNLNELQNMRVRRV-----------------------EKHIIIEPVQT 188 Shewanell...
Q085T2             124 LAWTQSVGDAFLQDEGRMLDTIQSLRQQADEANNLADLEQVKVSRV-----------------------ERRIIIESVRP 180 Shewanell...
Q8E8L4             121 LDWTQRLGEAFLANEGQVMDGIQSLRQQADKANSLANMDNMAVTRA-----------------------NNQIIIEPVRR 177 Shewanell...
Q485X9             124 LTWMQELGNAFLQDEARVLASIQSLRQQADQAGNLANMDNVKVIKE-----------------------QRVIIIEPAQP 180 Colwellia...
WP_015820267       110 LSWTERLGDAFLQDESQVLESIQRLRQRAYDEGNLTTNDYQSVSRD-----------------------QGDIIIEPVQR 166 Teredinib...
Q8ZRS9             220 QVVYVPNYNPATVYGAWPN-TAYPPVYLPPPPG----------QQFA-----DSFVKGFGYSLgvattYALFSSIDWDDD 283 Salmonell...
CASKLGSI:C427_5146 180 EVVYVPYYDTRVVYGNWWW-QDHQPYYWHRPSHs--------iFNAG-----LYWSTGVYIRP-----SFYFGGFHWRNR 240 Paraglaci...
WP_011761418       180 EIIYVPYYDPRVVYGHWRW-NRYPPVYWAPFPGy--------vSYHRh----FGWHSGISISF-----NFYFSNFHWYDR 241 Shewanell...
WP_011866494       174 EVIYVPYYDTRVVYGHWHW-YNYPPVYWAYPPHya-------rYYPGhisghFYFNSGIHISF-----NYFFSAFSWRQR 240 Shewanell...
WP_013052477       180 EIVYVPYYDPRLVYGHWAW-YRYPPVYWAPSPYyv-------rPHHGh----FYWHSGVHISF-----NYYFSAFSWHKH 242 Shewanell...
Q12PS8             189 QVIYLPYYDSRYIYGNWHW-QQHPPHYWHRPAYisssryiagpSHRAh----IYWDTGVHIGV-----NFFFSAFHWHKR 258 Shewanell...
Q085T2             181 EIVYVPYYDSRIVYGNWRW-NRYPPVYWHAPAYvh------yrPNHSa----IYWDSGVRISF-----NFFFSGFHWHDR 244 Shewanell...
Q8E8L4             178 EVVYVPYYDPRVVYGTWRWgVAYPPVYWQFGGYvgn----pyrPSHSy----FYWSPGIHISF-----NYFFSSFHWHRH 244 Shewanell...
Q485X9             181 EVIYVPYYDTRVVYGRWHW-THYPPVYWRNPNYy--------aAHYGh----FYWGHGVHISS-----HFYFSAFHWHNR 242 Colwellia...
WP_015820267       167 EVVYVPYYDTRVVYGPWWW-PVYPPHFWLNPHRhh-------aHQVGl----FFWAPGFFLGH-----SFYFGGFHWHHR 229 Teredinib...
Q8ZRS9             284 DhhhhdddhhdddyhhggngyqhngdnininVNNFNRIsgqNLP-----------------GQTMGWQ 334 Salmonella enterica s...
CASKLGSI:C427_5146 241 H------------------------------VVANYHY---RSHsdrywsnnhnnrqvvrvKEYPRWN 275 Paraglaciecola psychr...
WP_011761418       242 H------------------------------VIVH------HHHhyrrppe----pryaisQGAQRWR 269 Shewanella amazonensis
WP_011866494       241 H------------------------------IVVTH-----HHHttryrpy----srivtsSGAQRWH 269 Shewanella loihica
WP_013052477       243 H------------------------------VVVVH-----HTNsrhyryh----rpivtsHGAQRWH 271 Shewanella violacea
Q12PS8             259 H------------------------------VVVTS-----HHNshyyqrp----qqifisQGAKHWH 287 Shewanella denitrific...
Q085T2             245 R------------------------------VIAVP-----VHQnyryytp----rkisysHGAQHWQ 273 Shewanella frigidimar...
Q8E8L4             245 K------------------------------VVVID-----HHHshhyrpr----erysvsHGAQPWK 273 Shewanella oneidensis
Q485X9             243 H------------------------------VVVK------HYNrpgyhsr----kkivssHSAKRWN 270 Colwellia psychreryth...
WP_015820267       230 Q------------------------------VVVVR-----HSHrsyyegh----rrlvvhRDSHRWH 258 Teredinibacter turnerae
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