Conserved Protein Domain Family
SpoU

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COG0566: SpoU (this model, PSSM-Id:223640 is obsolete and has been replaced by 440332)
tRNA G18 (ribose-2'-O)-methylase SpoU [Translation, ribosomal structure and biogenesis]
Statistics
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PSSM-Id: 223640
Aligned: 108 rows
Threshold Bit Score: 120.469
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
16123426 121 E--PE-FDHGGISGKshidpaqlrRQRAEETRVYGENACKALFESRPdAIVRAWFVQSVT--PRFREALKWMAANRKAYH 195 Yersinia pestis
19553964   1 -----------------------------------------------------MGKGPWEeeNPGVPRPTSPLFDVTLLN 27  Corynebacterium glu...
1175994   91 VykTKeKKTGALSPRape---kikKNRAEEMKVYGENACLALFAERPeSIVRLWATVQMS--HKIGEVLSYLAENKKAYH 165 Haemophilus influenzae
15828342   1 -----------------------------------------------------------------------------MLR 3   Mycobacterium leprae
15839764   1 ----------------------------------------------------------------------------MLLR 4   Mycobacterium tuber...
15603722  97 SdkPReKKTGALSPRape---kikKNRAEEMKVYGENACQALFAQRPeSIVRIWATVEMA--KKSGELFSYLAEQKKAYH 171 Pasteurella multocida
15607521   1 ----------------------------------------------------------------------------MLLR 4   Mycobacterium tuber...
16765968  79 Et-PEkVDHGGISGKsfidpevlrRQRAEETRVYGENACQALFQSRPdAIVRAWFIQSVT--PRFKEALRWMAANRKAYH 155 Salmonella typhimur...
15639048   2 LehMKrEQARSQLSHep------pKRRRASLTVCGLRAVETLGSIHPeKIHRFFFTPVRA--KRFGPLCAYLAARKRLYR 73  Treponema pallidum
15803108  79 Et-PEkADHGGISGKsfidpevlrRQRAEETRVYGENACQALFQSRPeAIVRAWFIQSVT--PRFKEALRWMAANRKAXH 155 Escherichia coli O1...
16123426 196 VVEEDELAKASGTEHHGGVCFLIKKRQGLDAETYLQQ--QtqAKDCVLALEEVGNPHNLGGIMRTCAHFGINGVLLQD-- 271 Yersinia pestis
19553964  28 EGDRRNVVDAYRYWTREAIVEDIDTRR--H--------------SLHVAIENFENDANIGTVVRTANAFAVNTVHIVGrr 91  Corynebacterium glu...
1175994  166 VVDSEELARVSGTEHHGGICLLVKKPRAFTLQGYLD---IprNEDCLVLLDNVNNAQNIGGVLRTCAYFGVKNIVADN-- 240 Haemophilus influenzae
15828342   4 DGDTRNVVDAYRYWTREAIIVDIDRRR--H--------------PFHVAIENFGHDANIGSVVRTANAFAVDTMHIVGrr 67  Mycobacterium leprae
15839764   5 DGDARNVVDAYRYWTREAIIADIDTRR--H--------------PLHVAIENFGHDANIGSVVRTANAFAVHTVHIVGrr 68  Mycobacterium tuber...
15603722 172 VVDSAELALVSGTAHHGGICMLVKKARPFTLAGYLD---IprKQDCLVLIDGVQNPHNLGGVVRTCAVFGVKGVVIEQal 248 Pasteurella multocida
15607521   5 DGDARNVVDAYRYWTREAIIADIDTRR--H--------------PLHVAIENFGHDANIGSVVRTANAFAVHTVHIVGrr 68  Mycobacterium tuber...
16765968 156 VVDEAELAKASGTEHHGGVCFLIKKRNGTTVKQWVK---QaaDQDCVLALEDVANPHNLGGMMRSCAHFGVKGVVVQD-- 230 Salmonella typhimur...
15639048  74 SANTQELERLTQSVHHQGVAATIDEPRFPAVTHSQVEfwVq-rREFVVLLDRVGDAHNLGAIIRSAAFFGVHSLVVSDcr 152 Treponema pallidum
15803108 156 VVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVS---QagAQDCVLALENEXNPHNLGGMMRSCAHFGVKGVVVQD-- 230 Escherichia coli O1...
16123426 272 PAMLESGAaVRTAEGGAEHIKAINAD----DFLSVLDTFRKAGYTIVTTSSHk--GVSLSKAELP-AKMVLVLGQESDGL 344 Yersinia pestis
19553964  92 R--------W--NRRGAMVTDRYQHLmhheDVDSLLAWAIAERLTIVAIDNTpg-sVPLETAELP-KNCLLLFGQEGPGV 159 Corynebacterium glu...
1175994  241 VENLYSAAsMRVAEGGAEYIRVLEAD----YIDSALMQLRKSGYQIIHVSHNk-qGDPLDKVRLK-NKVVFVLSESST-- 312 Haemophilus influenzae
15828342  68 R--------W--NRRGAMVTDRYQRLchhdSTASMLDFAAGAGLTVVAVDNIpg-aARLEQTTLP-RQCLLVFGQEGPGI 135 Mycobacterium leprae
15839764  69 R--------W--NRRGAMVTDRYQRLchhdSTTGLLEFAAGAGLTVVAVDNVpg-aARLEQTALP-RECLLLFGQEGPGI 136 Mycobacterium tuber...
15603722 249 ADNLNAPAaMRVAEGGMEYVRVLETT----DVPKALAQLRQAGYQLIHVTANk-qAKPLSKLHFT-EKVVFVLNEQGD-- 320 Pasteurella multocida
15607521  69 R--------W--NRRGAMVTDRYQRLchhdSTTGLLEFAAGAGLTVVAVDNVpg-aARLEQTALP-RECLLLFGQEGPGI 136 Mycobacterium tuber...
16765968 231 AALLESGAaIRTAEGGAEHVQPITGE----SIVDVLDDFRQAGYTVVTTSSDr--GQALFSTTLP-EKMVLVLGREYDYL 303 Salmonella typhimur...
15639048 153 QQAQVTSAtYRVAQGGMEFVQLLRCTn----AQEVLEMCAGKMTRVGASPHAfrsLTRLSNILSPeEAVILVLGNEETGL 228 Treponema pallidum
15803108 231 AALLESGAaIRTAEGGAEHVQPITGD----NIVNVLDDFRQAGYTVVTTSSEq--GKPLFKTSLP-AKMVLVLGQEYEGL 303 Escherichia coli O1...
16123426 345 TDSAWQQGDLSVSIGGTGRVES-LNVSVATGILLAEWWRQNSAQ 387 Yersinia pestis
19553964 160 TEAARAGALMTCSIAQFGSTRS-INAGVAAGIAMHAWIRQHADL 202 Corynebacterium glutamicum ATCC 13032
1175994  313 -ESLATPEDTQARLTLASPIKSgLNIAVNAGVLLAKWYFR---- 351 Haemophilus influenzae
15828342 136 TDEARTGAAMIVSIAQFGSTRS-INAGVAAGIAMHAWIRQHADM 178 Mycobacterium leprae
15839764 137 TDDARAGAAVTVSIAQFGSTRS-INAGVAAGIAMHAWIRQHADL 179 Mycobacterium tuberculosis CDC1551
15603722 321 -ASLAQAEDEQVVLSLGNPLKAeLNIAVATGILLAQWDYR---- 359 Pasteurella multocida
15607521 137 TDDARAGAAVTVSIAQFGSTRS-INAGVAAGIAMHAWIRQHADL 179 Mycobacterium tuberculosis H37Rv
16765968 304 PEAAREPDDLCVKINGTGNVES-LNVSVATGVLLAEWWRQNKA- 345 Salmonella typhimurium LT2
15639048 229 SEHLTAHCDHLCRIAGSGQVES-LNVAQAGALFLSTIVQLRQSP 271 Treponema pallidum
15803108 304 PDAARDPNDLRVKIDGTGNVAG-LNISVATGVLLGEWWRQNKA- 345 Escherichia coli O157:H7 EDL933
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