Conserved Protein Domain Family
OTU_plant_OTU9-like

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cd22751: OTU_plant_OTU9-like 
OTU (ovarian tumor) domain of plant deubiquitinating enzyme OTU9 and similar proteins
This subfamily contains Arabidopsis thaliana deubiquitinating enzymes OTU8, OTU9, OTU10, OTU11, and OTU12, and similar proteins from plants and other eukaryotes. OTU8-OTU12 are deubiquitinases (DUBs)/ubiquitin thiolesterases (EC 3.4.19.12) that catalyze the thiol-dependent hydrolysis of ester, thioester, amide, peptide and isopeptide bonds formed by the C-terminal Gly of ubiquitin, a small regulatory protein that can be conjugated to a large range of target proteins. Protein ubiquitination is a post-translational modification of mostly Lys residues that regulates many cellular processes, including protein degradation, intracellular trafficking, cell signaling, autophagy, transcription, translation, and the DNA damage response. These DUBs may play important regulatory roles at the level of protein turnover by preventing degradation. They belong to the OTU family of cysteine proteases that use a conserved cysteine, histidine, and an aspartate, as the catalytic triad.
Statistics
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PSSM-Id: 438588
Aligned: 56 rows
Threshold Bit Score: 152.695
Created: 22-Sep-2020
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
putativeactive site
Feature 1:putative polypeptide substrate binding site [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                          #                                                         # 
Q8LBW2     195 LFQRLQLYGLVENKIEGDGNCQFRSLSDQLYrspeHHNFVREQVVNQLAYNrei-------------yeGYVPMAYNDYL 261  Arabidopsis thal...
PWA69649   460 LLDRIHRSGLVIKYVTGDGNCQFRSLSKIFHktqsKYHDLRLQIVKEMRANrqlyidyg--kslkipemNMNDSEYDDYV 537  sweet wormwood
PWA50480   350 RSRIKFYGCVGKIAVDEGGNGQFKAISELLRplvvPYEKVRENVVNQLLSFpklyqgf----vdledpeADVHLAYLEYV 425  sweet wormwood
PWA63637   218 LLRRFDFYGYVGEIALGDGNNQVKAISQQLGpsdwPHEKVRAFVVKQILLHselyenl-----vnppsvDSSNWTFLEYL 292  sweet wormwood
PWA46804     2 LLQRLKEYKYVRRQVRDDGNCFFRAVSHQLFntedYHMFIRAVAMAYMRLHhqdf----------ydprEGSFEGFWNYT 71   sweet wormwood
PWA86219    20 LRQRRQLFRFIRKIVIGDGACVFRSVSDQMYhsqfWYGDVRKAACDQMRNNpkl------------ymrGFTKAEYDAYI 87   sweet wormwood
PWA50479   253 LMARIQFYCFAQIKVVDDGNCLSRALSDQLThsqwKYKQVREALVKQMRSNqslyeqkv--rqlldsdpEFEHETYSDYV 330  sweet wormwood
PWA96653   970 LLNRMKLYEFEHVKVTGDGNCLLRALSEQMThdehKHGRVRELLAGQIKGNeelykelvqmfmahhpelFGQQPTYSKFV 1049 sweet wormwood
PWA68257    34 QQRLDEFQYVVRPVVGDDGNCVPRSIAHQLFsneeHHPYVRETVAAQLRVFwer------------yiyQRSAGAYERYV 101  sweet wormwood
PWA44865    89 RDEWLDMLGYVLRKVDGDGNCLMRAISHQMWfteaHHEIIRRVVIAQFRTHsdl------------yrkGYTDEEYEGLI 156  sweet wormwood
Feature 1       #       ####                        # #                                    #   
Q8LBW2     262 KAMKr-nGEWGDHVTLQAAADLFGVRMFVITSfkDTCYIEILPhf---------------------qkSNRLICLSFWa- 318  Arabidopsis thal...
PWA69649   538 ARMSr-dKTWGDIITLFAATNLYKVRATIISSfvDSPMREVVPvg---------------------vrYKTDIYLSYVyi 595  sweet wormwood
PWA50480   426 NSVSr-dGEWGDEYTMQAAADFFQVMFVVITSleGCAVNEFLPydmv------------------nvdPEKVLYLSCLye 486  sweet wormwood
PWA63637   293 FCTSk-dGAWGETVTLQAAADAFEVKIVVIDSseDCAVHDFFPygv--------------------ehPKKVLCLSCVtc 351  sweet wormwood
PWA46804    72 YKMSq-cGEYAGEDMIKATCESFRLKIVRLFSfhERCIEELIPrf---------------------drPKKVIHLSFI-- 127  sweet wormwood
PWA86219    88 DKMSl-pWTCADHLVTRAICDAFQLTIIELGSdpIRCFREYHPtkkttvrsrvdsrksaiikselfkwNLAEIPLSVErm 166  sweet wormwood
PWA50479   331 NRKSe-dKECGDSVMMQAAADRFQAKLVCLCSlkTFAILEYFPygl--------------------aeYKRVLYLASLa- 388  sweet wormwood
PWA96653  1050 QYFSkdgSMAPVFITLQAASDFFTAKIVCITSeeKAVFREFTPhdv--------------------ddPEIVWYLSVLat 1109 sweet wormwood
PWA68257   102 DKMAt-qTKWCDFTFCQAAADVFRVKFFEIVSydSYAKCIILPhd---------------------rvFKKVIFICSS-- 157  sweet wormwood
PWA44865   157 KDMSt-pYKDTQLIACYAIADAFEVSIICLVTyhDSPIYVVKPsng--------------------veSRKNLYLCIS-- 213  sweet wormwood
Feature 1          ###    
Q8LBW2     319 ---EVHYNSIY 326  Arabidopsis thaliana
PWA69649   596 sddDAHYDALV 606  sweet wormwood
PWA50480   487 -ndEKHYNILH 496  sweet wormwood
PWA63637   352 -qdETHYNSIQ 361  sweet wormwood
PWA46804   128 ---PSHSDSMF 135  sweet wormwood
PWA86219   167 -nyMKHTGCFY 176  sweet wormwood
PWA50479   389 ---RSHADSIY 396  sweet wormwood
PWA96653  1110 --eEGHTDSVY 1118 sweet wormwood
PWA68257   158 ---DEHTDSMF 165  sweet wormwood
PWA44865   214 ---KNHADSMF 221  sweet wormwood

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