4MCB


Conserved Protein Domain Family
TrmD

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COG0336: TrmD 
tRNA G37 N-methylase TrmD [Translation, ribosomal structure and biogenesis]
tRNA G37 N-methylase TrmD is part of the Pathway/BioSystem: tRNA modification
Statistics
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PSSM-Id: 440105
Aligned: 885 rows
Threshold Bit Score: 241.841
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4MCB_A         1 MWIGVISLFPEMFKaITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKA---- 76 
WP_015769262   1 MKFNVLTLFPELFEqYLSQTILKRAIDKDIIDFNIVNIRDYARNKHSQMDDIPFGGGAGMVLKPEAYWNFFYENYEfynn 80 
WP_012861501   1 MKFTVLTLFPEIFElYLNQTIIQRAVDMGIVTYEIVNIREFSGNKHGQVDDTPFGGGAGMVLKPEPYWNYFKIKNA---- 76 
WP_012858865   1 MKIRVLTLFTDIFKiYLSQTIMQRANDQN-IKIDIENIRDYSDNKHKQVDDTPFGGGAGMVLKPEPFWKYFVNLRK---- 75 
NP_712569      1 MKFNFITLFPDKIQsYFSEGLQQKAIESGVFSVNIIQLRNFSGNKHNRVDDTIYGGGPGMLLRVEPIHKAILSLGE---- 76 
WP_013756337   2 NSYYVLTLFPEIFNtYFSIGLAKKGLDKGLFSVDIINLRDFAKNKFKKVDDYPFGGSSGLVLQVQPIMDAINYIES---- 77 
WP_014489153   1 MIIDILTLFPKFYEsTTSFGVISMALNEKKIDLNIEDMRIYGEGNYKKCDDYPYGGGPGMIMTYNIFKKYFDS------- 73 
WP_023791795   1 MIISILTLFPELYKeFSKTSLIGRATQKGVMKLNVKNLFEYALPKTR-IDSPVFGHNSGMLLRPEIIEKAIEEQEK---- 75 
WP_046328261   1 MKITVLTLFKELFDmYLSQTILDRAVNNDLVEYDIVNIRDYSTNSYHQVDDTPFGGGAGMLLKPEPFFKYFFSLKE---- 76 
WP_115585501   1 MNISVLTLFPELYKpFFDASLIKKAQEKGLVSCHTNNLLSYAPPKSR-VDDTTFGHNAGMLIKPEIIDQAVTAGET---- 75 
4MCB_A        77 A---AGEGAkVIYLSPQGRKLDQGGVTELA----Q-N-QKLILVCGRYEGIDERLIQTEIDEEWSIGDYVLTGGELPAMT 147
WP_015769262  81 EnsdLKKPY-VIFLSPQGKQLTHKKVTELS----E-K-EEIVLISGRYEGLDQRVIDKFVDEEISIGDYVLSSGDLPCLV 153
WP_012861501  77 En--pKKPF-VIFVTPQGIPANQNIISDIA----E-K-EDVVLISGRYEGLDQRVIDNFVDMEVSIGDFVLSSGDLPVLC 147
WP_012858865  76 Sk--iKKPF-TIFVTPQGKKLTQEKLIELS----K-M-EDLCIISGKYEGLDQRVIDKFVDEEISIGDYVLSSGDLPSLV 146
NP_712569     77 -----EKGI-VILTSPSGIPFNQSIAMDLK----KgG-KPLTFISGYYEGVDHRVTEHLVDMEMSLGNYVLSAGDLASIC 145
WP_013756337  78 I---CPDVV-FFYPSPRGEVLKQKKLFEIS----K-KfDKICFLCGHYKGVDERIFKLKEIKEISLGDYVLNSGEIATVV 148
WP_014489153  74 ----HKKGY-TIIFSPSGKTLTQQKIKELA----Y-K-EHITMILGHYEGIDYRVEEKYADEALSIGDYVLSGGEIPALL 142
WP_023791795  76 I---YKSSY-KIFFSPQGKKLDQNLLKDLAskihQ-K-QHLMLLPARYEGMDSRVEEYYADLIISIGDYVLMGGDLPAMV 149
WP_046328261  77 En---RKPY-VVFVTPQGNKLNQERIDKLK----E-K-EDLVIISGRYEGLDQRVIDRYVDEEISIGDFVLTSGDLPALC 146
WP_115585501  76 A---LGTAY-KIILSPQGKVMTQPRLQELYerikD-Q-KHIMLIASRYEGLDARVESHYADELVSVGNFVVMGGDIPAML 149
4MCB_A       148 LIDAVARFIPGVLGKQASAEEDSFA---D-GLLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPEL 223
WP_015769262 154 IMDSVIRIKEGVI-KKESFETDSFY---N-GLLGFPQYTRPVEIDGYSVPEVLRSGNHAKIDEYRQLHSIEKTMKNRMDL 228
WP_012861501 148 LMDSVIRIKDGVI-KKESFETDSFY---N-GLLGFPQYTKPAVIEGVEVPEVLTSGHHKKIDEYRLLESLKKTCKNRPDL 222
WP_012858865 147 IIDGIMRMKDGII-KKESYETDSFY---N-GLLGFPQYTRPQMIDKMEVPEVLISGNHEKINQYREMKAIFKTLKNRPDL 221
NP_712569    146 IADAVSRLLPGFLGADESLLDESHN---HpDILEYPQFTKPSEYNGWKVPDVLLSGNHASILAWREQNRKKIERGNYEST 222
WP_013756337 149 LLDGLLRLIPGFIGNEKCIMEDSIS---S-CLLESPNYTKPREIFGEAVPDILLSGHHENIKFWQMKESFKKTIKSKPYL 224
WP_014489153 143 LLDAIAR-YKGVMNNEESVISDTFEensN-GLLEYEQYTRPPEIDDMKVPEILLSGNHKNIDEYRRKRSIIKTFANRADL 220
WP_023791795 150 LIEGLTRLLPEVVSNQESIANESFS---G-PFFDHPSYTLPVIWKGFKVPDIVRSGNHKEIFNWQRSKAIEKTIYNNFNW 225
WP_046328261 147 LIDAITRQKDGVI-TKESYETDSFY---N-GLLGYPQYTKPSNLGRHKVPEVLLSGDHKRIREFRFKESVKKTIKNRPDL 221
WP_115585501 150 LIEGLLRFVPGIVGKEESVQLDSFS---G-AFVDYPEYTRPIVWKGVTVPEIIRSGNHAAIESWRQEQAAQLTVKKHFNW 225
4MCB_A       224 LEGLALTDEQRKLL-KEAq--aE 243
WP_015769262 229 FEKKLAEDEEFLKLcEKYk--lK 249
WP_012861501 223 LEKKIKEDENFRAVwEKYk--kE 243
WP_012858865 222 LEEKFKDKDFLRKY-DEFlkliE 243
NP_712569    223 FKRSA----DSgc---------- 231
WP_013756337 225 ILGRSFSKNEKAAF-AQAk--aE 244
WP_014489153 221 FSKINLNKKDIETI-FEYl--kE 240
WP_023791795 226 LRSHILNYEDIQEV-KNKlpshy 247
WP_046328261 222 IAKKLEEDEDFRKMiEDLl---- 240
WP_115585501 226 LRSVSTTQAERTLV-KKYiphhy 247
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