Conserved Protein Domain Family
LAT

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pfam15234: LAT (this model, PSSM-Id:405831 is obsolete and has been replaced by 464576)
Linker for activation of T-cells
Statistics
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PSSM-Id: 405831
Aligned: 12 rows
Threshold Bit Score: 192.019
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ELK10906       1 MEA-VILLPLVLGFLLLPLLAVLLMALCVHCRELPAP--YQTL-SSAS-Si------------PHSIIIKRP---P---- 56  black flying fox
XP_014303033   1 MEA-AILLPLALGLLLLPLLAVLLMALCVRCRELPDTytYDSA-VPDS-L-------------PRSIVIKRP---A---- 57  little brown bat
XP_003478268   1 MEEnSVVLSEPLGLLLLPLIAMLLMVLCVRCRELRGS--YGSA-SENR-Sq------------TESFLFKPT---Q---- 57  domestic guinea...
O70601         1 MEA-DALSPVELGLLLLPFVVMLLAALCVRCRELPAS--YDSA-STES-Ly------------PRSILIKPP---Q---- 56  Norway rat
XP_012664368   1 MEG-AGLVPYVLGLLLLPFLAVLLLALCVRCRELPGS--YDSA-TSDS-Ly------------PRSILIKPA---H---- 56  small-eared galago
1_pfamImport   1 MET-TSLGPSLLWLLILLFPTLLVTALCLCCRDLPGK---TSAtSFDT-VymkgfqnpapsphPDPLMLCTPnlyP---- 71 
XP_017198058   1 MEV-NVLGHSALGLLLGPLLAVLLMALCVRCRRLSDS--YNSAsSSDG-Ly------------PRSILIKPP---Y---- 57  rabbit
XP_009007613   1 MEE-TILVPCVLGLLLLPILAVL-MALCVHCHRLPGS--YDST-SSDS-Ly------------PRGIQIKRP---Y---- 55  white-tufted-ea...
XP_023414774   1 MET-AVVVSTVLELLLLPLLAVLLLALCLRCRELPGS--YDSA-SSDS-Ly------------PSNIVVKRP---H---- 56  African savanna...
XP_023471840   1 MEA-AILIPSVLGPLLLPLLAVLLMALCVRCRELPGS--YDS--AATDsLt------------PSS-----I---Vikrp 55  horse
XP_004020908   1 MEA-VSLPVYVLGPLLLPLLAVLLMALCVRCRELPGS--YDTA-VSDS-Lt------------PSSIMIKLP---P---- 56  sheep
XP_030155784   1 MEA-VVLIPYVLGLLLLPLLAVV---LCVRCRELPGS--YDNT-ASDS-L--------------APSSIVIK---Rp--- 52  Canada lynx
ELK10906      57 -TLAPWppattyppVTSYPPLSQPDLLPIPRSPQPPGGSHRMPSSRQDSDGANSVASYEND------------------- 116 black flying fox
XP_014303033  58 -TLAPWpq----atVTSCPPLSPPDLLPIPRSPQPPGGSHRMPSARQDSDGTNSVASYENE------------------- 113 little brown bat
XP_003478268  58 -MLPSWspyp----sapdPHLSQPDLLHIPRSPQLLLGSHRMPSSQQDSDGANSVASYENQ------------------- 113 domestic guinea...
O70601        57 -ITVPRtpatsyplVTSFPPLRQPDLLPIPRSPQPLGGSHRMPSSRQNSDDANSVASYENQ------------------- 116 Norway rat
XP_012664368  57 -TLAPWapatsyppVTSYPPLSQPDLLPIPRSPQPPGGSHRMPSSRQDSDSANSVGNYENE------------------- 116 small-eared galago
1_pfamImport  72 -TDCNWppaa----------pcpPDLLPIPRSPQPPEPSRRIPSSRRDPD-TRSEPSYENEgisglgglgrgglg-psqa 138
XP_017198058  58 -TPAPWp------aVTSVPPLSQPDLLPIPRSPQPPGDSHRMPSSRRDSGGAQSVASYENE------------------- 111 rabbit
XP_009007613  56 -TLAPRppt--yppVTSYPPLSQPDLLPIPRSPQPPGGSHRMPSSRRDSDGANSVPSYENE------------------- 113 white-tufted-ea...
XP_023414774  57 -TLAPWppansyppVTSYPPLSQPDLLPIPRSPQPPGGSHRMPSSRQDSDGANSVASYENE------------------- 116 African savanna...
XP_023471840  56 pTLVPWppatsyppVTSFPPLSQPDLLPIPRSPQPPGGSHHMPSSRQGSDGANSVASYENEe------------------ 117 horse
XP_004020908  57 -TLVPRp------sTTPYPLPSQPDLLPIPRSPQPLGGSHRMASSRQDSDSANSVASYENEgvtgtpvapagrrlrpvlg 129 sheep
XP_030155784  53 pTLATWtpatsyppVTSYPPLSQPDLLPIPRSPQPPGGSHRMPSSRQDSDGANSVASYENEgasgapgalvagrlgpglg 132 Canada lynx
ELK10906     117 ---------EPACEDEDEDe-dEDYHNE---GYLVVLPDTAPAT--GT--TVSSAPAPSNPgGLRDSAFSMESGEDYVNI 179 black flying fox
XP_014303033 114 ---------EPACEDEDDEe--EDYHNE---GYLVVLPDTVPATatATcaAVPAAAAPSSP-GPRDSAFSMESGEDYVNV 178 little brown bat
XP_003478268 114 ---------EVACEDADKDedeEDYPNEgygGYVEVLPDSTPAT--ST--GVPSAPVPSNP-GLRDSAFSMES-RDYVNV 178 domestic guinea...
O70601       117 ---------EPARKNVDEDedeDDYP-E---GYLVVLPDSSPAA--VP--VVSSAPVPSNP-DLGDSAFSMESCEDYVNV 178 Norway rat
XP_012664368 117 ---------DHRCEDEDENddeDDYL-----GYLKVLPDSTSAA--SP--AALSAPVSSNP-GLRDSAFSVESSKDYVNV 177 small-eared galago
1_pfamImport 139 tpsdtcvfpELEPEDADEe---DDYHNNe--GYLLVLPDGSPNS--SSepLSNSAPNLINP-GLRESPSSTMCGDDYVNV 210
XP_017198058 112 ---------ELACEDADEDedeEDSHNE---GYLEVLPDDSPAT--SG--PGPSAPAPGNP-GLRDSAFSMESGDDYVNV 174 rabbit
XP_009007613 114 ---------EPACEDADEDedeDDYHNP---GYLVVLPDSAPAA--ST--AAPPAPALSTS-GLRDSAFSMESVDDYVNV 176 white-tufted-ea...
XP_023414774 117 ---------EPACEDTDEDedeEDYHNE---GYLVVLPDSTPAT--ST--AVPPAPVPNNS-GLRDSAFSMESGEDYVNY 179 African savanna...
XP_023471840 118 ----------pVCEDAEDDedeEDYHNE---GYLVVLPDPAPTTtaST--VVPPAPVSKNP-GLRDSAFSMESGEDYVNV 181 horse
XP_004020908 130 sadpvslppEAACEDADEDdydEDYNNE---GYLVVLPDRDPAT--STgnAVSQAPAPSKP-GLRDSAFSMESGEDYVNV 203 sheep
XP_030155784 133 padrcvvtsEPACEDDDEDe-eEDYPNE---GYLEVLPDSTPAT--GT--AVPPAPAPSNP-GLRDSAFSMESGEDYVNV 203 Canada lynx
ELK10906     180 -----PESEESADASLDGSREYVNV--SQELQP-TARTKPATPSSQKVEDEeeee--eegAPDYENL 236 black flying fox
XP_014303033 179 -----PESEESADASLDGSREYVNV--SQELQP-TVRTEPATLASQEAEEEee-----egAPDYENL 232 little brown bat
XP_003478268 179 -----PESEESAEASLDGSLEYVNV--SQELQP-LPGTEPATLSSQEVEDEed-----eeAPDYENV 232 domestic guinea pig
O70601       179 -----PESEESAEASLDGSREYVNV--SQDAQP-VIRAELASVTSQEVEDEeeedvdgeeAPDYENL 237 Norway rat
XP_012664368 178 -----PESEESAEASLDGSLEYVNV--SQEQQP-GARTEPATLSSQEVEDEee-----egAPDYENL 231 small-eared galago
1_pfamImport 211 -----SAS-ESTEVSLGGSCEYVNVpeAQEKRTpSSRSEPG------VEGMdge----eeGPDYENV 261
XP_017198058 175 -----PESGGSADASLDGSREYVNV--SQEL-PlEARIQPATLSAPEAGDQeed----eeAPDYENL 229 rabbit
XP_009007613 177 -----PESGESAEASLDGSREYVNV--SQELHPgVAKMEAATLSSQEAEEVee-----egAPDYENL 231 white-tufted-ear marmoset
XP_023414774 180 dlfphPSSSAWLDHSLDGSREYVNV--SQELQP-TAKTEPATASSQeveeeeeeeegapdyenl--- 240 African savanna elephant
XP_023471840 182 -----PESEESADASLDGSREYVNV--SQELQP-TARTEPATRKAQRVEDEee------gAPDYENL 234 horse
XP_004020908 204 -----PESEESADASLNGSREYVNV--SQELQP-GAKTKPDTQNSQEVEDEe--------APDYENL 254 sheep
XP_030155784 204 -----PESEESADVSLDGSREYVNV--SQELPP-VARTEPAILSSQNdde-------eegAPDYENL 255 Canada lynx
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