5ZE6,1RQJ,3LDW,1UBW,5H9D


Conserved Protein Domain Family
polyprenyl_synt

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pfam00348: polyprenyl_synt (this model, PSSM-Id:395277 is obsolete and has been replaced by 459773)
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Polyprenyl synthetase
Statistics
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PSSM-Id: 395277
Aligned: 430 rows
Threshold Bit Score: 150.343
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5ZE6_A        29 VQLINQLGYYIVsGGGKRIRPMIAVLAARAVG----------Y-------EG--NAHVTIAALIEFIHTATLLHDDVVDE 89  Escherichia col...
XP_001318110  32 QQHFHDLVDYTI-AGGKCLRGLLSVFGFLELTg--------ySp-----dSKeaEAAYALGWVQEILQASFLVADDLMDK 97  Trichomonas vag...
EAY16858      31 EKHCLEVLDYST-KGGKLTRGVVCASAFIESTg--------cDp-----dSEeaKIGYTIGWVLELMQAAFLIADDFMDQ 96  Trichomonas vag...
XP_001325885  31 QKHCIDMLEYST-KGGKMLRGIMTAAVYLELTg--------ySp-----dSEeaKVGYYLGWVEEIIHAGYLIADDLMDQ 96  Trichomonas vag...
3LDW_C        66 SKYYKLLFDYNC-LGGKNNRGILVILIYEYVKn--------rDi-----nSSewEKAACLAWCIEILQAAFLVADDIMDK 131 Plasmodium viva...
Q4UAU6        44 LLYYSYAVQYNL-QGGKMLRGTMVLSTVKSLCgtnipenlmtQtlivgmyNSnhLKQFIVAWCVELLQTSFLVADDIIDK 122 Theileria annulata
CCD78373      40 EQHFQNVTSYNL-SSGKRIRGVLVVLSYMVFSnk-------nEn-----sRKnlSCVYLIGWCVELLHAGFLVLDDIIDN 106 Schistosoma man...
EFW99779      35 MERLNRILIQVQ--GGQISRPRVMFKLFDKLAe--------rEp-----tEDevREVYVMAWVVELLQFAILASDDIVDG 99  Grosmannia clav...
XP_001565042  33 KRYLKDMMDTTC-LGGKYNRGLCVVDVAEAMAkda-----rmDaa---amERtlHDACVCGWMIEMLQAHFLVEDDIMDN 103 Leishmania braz...
NP_493027     38 QYRCRNLFDNTV-IGGKYSRASLCVDTIRALQph-------lRd-----eTQelQAVCEAAATLEIIQSFYLIADDIMDN 104 Caenorhabditis ...
5ZE6_A        90 SDMRRGKATANAA-----FGNA-A-SVLVGDFIYTRAFQMMTSL--------GS-----------LKVLEVMSEAVNVIA 143 Escherichia col...
XP_001318110  98 SPLRRDKPCWYCL-----QENK-YtAVSDSYFLENVLYMIIDKYfadfpvevVL------------EIKHLLHITTLRTA 159 Trichomonas vag...
EAY16858      97 SETRRGMICWYKIe---sVNEQ---AVNDAMIVENLAFVLLDSVrsk--lniKSy----------ARLVQYLRTINTITT 158 Trichomonas vag...
XP_001325885  97 SETRRGQECWYKRe---eIGDQ---AVNDGLILQDLAYVLLDKIrnk--lntKYy----------AKLIEFSRKIGTYTT 158 Trichomonas vag...
3LDW_C       132 GEMRRNKYCWYLLk---dVETK-N-AVNDVLLLYNSIYKLIEIYlr----neSCy----------VDVIATFRDATLKTI 192 Plasmodium viva...
Q4UAU6       123 STKRRSNTCWYLVp---tIGVS-N-AINDVMFLYTLIYRILFNTmk----dsKKf----------LEIIETFNRVSMTTI 183 Theileria annulata
CCD78373     107 STLRRGQPCWHCTqidsnRGLI---GVNDGLHLILSSKYLIHSLfaen-qsdVDsyswkdknnvyLKLCKLFDEISYKTC 182 Schistosoma man...
EFW99779     100 DLWRRGRWSWHRQ-----PGVG-LsAVYDTFVATFLALAFLKKHld----qkKAy----------IGMVESINREILYVQ 159 Grosmannia clav...
XP_001565042 104 SKTRRGRPCWYLH-----PGVTtQvAINDGLILLAWATQVALHYfad--rpfLA------------EVLRVFHDVDFTTT 164 Leishmania braz...
NP_493027    105 SETRRGKPCWFRRe---gVGMS---AINDAFIMDSFVEDILRLAlp----ghVNl----------DRLCEAYRKSKQKTL 164 Caenorhabditis ...
5ZE6_A       144 EGEVLQ---L-------M---NV---------------N--DPDIT---------EENYMRVIYSKTA-RLFEAAAQCSG 183 Escherichia col...
XP_001318110 160 LGQYID---M----------------------------H--KKEPT---------IDNWTLTVTNKTAyYTIWQPFLSGI 197 Trichomonas vag...
EAY16858     159 MGQTLD---F----------------------------I--NKTKS---------FESYEVSVRNKTShYSLCAPIILGL 196 Trichomonas vag...
XP_001325885 159 IGQTYDfiak------------------------------------------ipsFQEYNQIVTYKTAfYTVVSPIVFGL 196 Trichomonas vag...
3LDW_C       193 IGQHLDtniFsd----kY---SDahreidvnninvpeqP--VIDINmi------nFGVYKNIVIHKTAyYSFFLPIVCGM 257 Plasmodium viva...
Q4UAU6       184 LGQHLD---Iyes----------------------nsdV--LFHDSke------aTKLFAEICKNKTSyYSFFLPLKLGM 230 Theileria annulata
CCD78373     183 SGQCLD---VlssnpnnQcilDR---------------K--QNNLEfdsftrnysPDVFEAITHWKTGfYTFYLPVACGM 242 Schistosoma man...
EFW99779     160 LYQSFD---T-------M---VA---------------NqgPGNVStf------cEHKLRDISLGLCG--YFFLPFSLML 203 Grosmannia clav...
XP_001565042 165 IGQLYDvtsMvdsakldAnvaHA---------------N--TTDYVey------tPFNHRRIVVYKTAyYTYWLPLVMGL 221 Leishmania braz...
NP_493027    165 IGQFLDts--------------------------------svNQISsf------tWDRYELMVENKTShYTVFHPIQMAL 206 Caenorhabditis ...
5ZE6_A       184 ILAG--CTP-EEE--KGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNvGDDLNEGKPTLPLLHAMHhg-------tPEQ 251 Escherichia col...
XP_001318110 198 VASQkiP-A-EVWqsKPFEDALIKAGVLFQCQDDWLDQYGQAAVTGKV-GTDIQDGKVSWLFAKAMEvg-------nEEQ 267 Trichomonas vag...
EAY16858     197 IASQk-F-EvTDKf-ESIEKFALRLGYYFQVQDDYFDVYGDPQVTGKI-GSDIKDGKNTWLFCKAYEla-------nDEQ 265 Trichomonas vag...
XP_001325885 197 IGSQ--IYDvDDKf-EDIEKFMIRLGNYFQVQDDYIDVYGDPKHTGKI-GTDIQDAKISWCYCKAYEla-------nDDQ 265 Trichomonas vag...
3LDW_C       258 LLAG--IAVdNLIy-KKIEDISMLMGEYFQIHDDYLDIFGDSTKTGKV-GSDIQNNKLTWPLIKTFElc-------sEPD 326 Plasmodium viva...
Q4UAU6       231 MLSG--VELsNLFy-SKVESISILIGTLFQAQDDYLDCYGDPDNFGKN-GTDIQTRKCSWLLSQALTia-------sEEQ 299 Theileria annulata
CCD78373     243 ILAE--VDTdDIF--KSVQHILLKLGNYFQAQDDYLDCFGDSEITGKV-GTDIAEGKCTWLIVEALKyl-------sPEQ 310 Schistosoma man...
EFW99779     204 HYLGqgT-P-DNL--RQTREITDEISIYYQAQNDYIDLYGDRSNNGKD-GRDIRENKCSWLIVEALNrs-------dKGQ 271 Grosmannia clav...
XP_001565042 222 LVSG--TAEkVDK--EVTHKVSMVMGEYFQVQDDVMDCFTSPEKLGKI-GTDIEDAKCSWLAVTFLAia-------pAEK 289 Leishmania braz...
NP_493027    207 IISD--V---LAYh-GSVKKVAYQIGFLFQSQDDFLDVYGDPKITGKI-GTDIQDGKCTWLAVRALQkmhktpekwgAKL 279 Caenorhabditis ...
5ZE6_A       252 aqMIRTAIE-QGNg-RHLLEPVLEAM 275 Escherichia coli K-12
XP_001318110 268 rkLLLENVGhHEPekVQIVRDIYKAL 293 Trichomonas vaginalis G3
EAY16858     266 kkTLDQKIGhEEF--VEDIKKLYEEI 289 Trichomonas vaginalis G3
XP_001325885 266 kkILKEKIGhEEY--VNDIKQLYADL 289 Trichomonas vaginalis G3
3LDW_C       327 kiKIVKNYGkNNLacVKVIDSLYEQY 352 Plasmodium vivax Sal-1
Q4UAU6       300 knLIKENIGhDDNskVDVVKSIYREL 325 Theileria annulata
CCD78373     311 yeILKTNYGkPDLksQQTVRNLYDTI 336 Schistosoma mansoni
EFW99779     272 rtALKNKYGrSDKecVDEVKQIFNDL 297 Grosmannia clavigera kw1407
XP_001565042 290 aaEFKANYGsADPakVAVIKQLYAEQ 315 Leishmania braziliensis MHOM/BR/75/M2904
NP_493027    280 ieEFKTSFGsVDPekVEKIKRIYDEL 305 Caenorhabditis elegans
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