5Z3G,4W20,3J61,3J39,3ZF7,4A18,1VX7


Conserved Protein Domain Family
Ribosomal_L28e

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pfam01778: Ribosomal_L28e (this model, PSSM-Id:396372 is obsolete and has been replaced by 460323)
Ribosomal L28e protein family
Statistics
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PSSM-Id: 396372
Aligned: 218 rows
Threshold Bit Score: 54.445
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5Z3G_Z                          5 IVWQVI--NQSFcSHRIKApngQNFCRNEYNVTGLCTRQSC----------PLANSKYATVK--CD--NGK------LYL 62 
XP_007875570                   23 fVWACLkkNASF-LVKQRVgksVVFSKERLNPANRHTYSYC----------GLLNDKGLGLEsgKN--NKG------LVV 83  Pneumocystis murina B123...
CCJ30659                       14 LVWACLrkNASF-LVKQKSgkpIFLSREPLNPLNKHMYIYS----------GLSNDKALSVEpnKN--NKG------IVL 74  Pneumocystis jirovecii...
A0DHZ4                          5 VLWEVVkgNNAF-LVKrn---gLTLSTDPFNNTGVQTYSST----------GFISKNAVGVV--PT--SGKvnqinnINL 66  Paramecium tetraurelia...
EGR31717                       14 LHWELVknFNCY-QLKnf---gQKFTKDPYSLTGKNTFYGS----------GFLHLSGLALN--KG--EKS------TVV 69  Ichthyophthirius multifiliis...
WGS:AAGF:cds.TTHERM_00487140A  54 LVWEIVknNNAF-LVKnn---gVAFTTDPFSVTGRNTQVGL----------GFTHRHGVALK--GG--AKQ------AIA 109 Tetrahymena thermophila SB210...
XP_001611330                   27 LVWELIkkNNAY-IFKsg---hETFTKERYNLMARHTPMYS----------GLMQNSVMNLE--LSpsGSK------IVL 84  Babesia bovis T2Bo...
Q4UBK1                         20 LLWELVrnNHAF-LKKsr---tTTFSLESHNLLSKHSPRFTvltqfcitfvGYTNKTSYDVV--LN--STG------SLI 85  Theileria annulata...
Q4N0Z3                         20 LLWELLrnNHAF-LKKsr---tTTFSLESHNLLSRHCPRFT----------GYTNKPSYNVV--LN--STA------SLV 75  Theileria parva...
4A18_O                          4 LVWEIVknNNAF-LVKnn---gVAFTTDPFSVTGRNTQVGL----------GFTHRHGVALK--GG--AKQ------AIA 59 
5Z3G_Z                         63 YMKTP------ERAHTP---AKL----WERIKLS--KNYTKALQQIDEHL--LhW-SKFFRHKCKQRFTKLTQ 117
XP_007875570                   84 LMKNCp----lESRNKP---SSM----VQKVYYAp-KSYCYTIQRIERLItkKqY-PLKLKRAAISRARLLLS 143 Pneum...
CCJ30659                       75 LVKNTs----kTSRNKP---ACL----VNRICFSprRPFSFISQHIKRFVlkKkY-RPDLQEAALYRARLFLY 135 Pneum...
A0DHZ4                         67 VAKKStkfqqaDRKAKN---TQS----VYASTLAvkHGVHTASRVIRKRFg---TsRLGLQKAALRKLVKLNR 129 Param...
EGR31717                       70 ASLRK------NQTHKKvrkSGN----LEGAQLNvkSGFQRVAKVIRKTFq-----TKGVRQAALRKLVNFHR 127 Ichth...
WGS:AAGF:cds.TTHERM_00487140A 110 TSLRK------NQSHKVk-kTGT----IEAETLTvkGGVQRVAKVIRGRFq-----SKGLKQFALKKLVNFHR 166 Tetra...
XP_001611330                   85 TSMDL------QNARQP---RNK----TQTKNLDknPARVEFLKNFAYPS------RPELAEVLAEKFIKMTH 138 Babes...
Q4UBK1                         86 TLKRSn----vRNSRRP---SSK----TSVKSL---KKSLELVNSLKSTV--KkD-RPDLADLVARKFTMLTK 141 Theil...
Q4N0Z3                         76 TFKKNn----lKNSRRP---SSK----ISVKTL---IKSLKLLDSVKTTV--RkD-RPDLTELLARKFTMLVK 131 Theil...
4A18_O                         60 TSLRK------NQSHKV---KKTgtieAETLTVK--GGVQRVAKVIRGRF--Qs---KGLKQFALKKLVNFHR 116
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