5HY7


Conserved Protein Domain Family
SF3b10
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pfam07189: SF3b10 
Splicing factor 3B subunit 10 (SF3b10)
This family consists of several eukaryotic splicing factor 3B subunit 10 (SF3b10) proteins. SF3b10 is a 10 kDa subunit of the splicing factor SF3b. SF3b associates with the splicing factor SF3a and a 12S RNA unit to form the U2 small nuclear ribonucleoproteins complex. SF3b10 and SF3b14b are also thought to facilitate the interaction of U2 with the branch site.
Links
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Statistics
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PSSM-Id: 462114
Aligned: 67 rows
Threshold Bit Score: 79.8931
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
5HY7_C        6 RNQQELERLQAKYVGTGHPDTTSWEWKTNIHRDTYSSIVGHPPLLSYMALAQ--NEPVAKFRVQMIRKMLQPVG 77  Chaetomium thermophilu...
CAR65222      6 KEELIYEDMRKKHPGVGSARTTKEEWSNTISKDTYASLAIHQNLLEYYTLASg-FPSKRDAQLTLLRKLANPpk 78 
XP_003959428  6 RQRQVFQTFKQKYVGLGTEDTMKEDWLSNVRKDTYTNIQGHSAMLEYVTIATdgMTSKKDMRMSLLKKMVDtee 79 
ESX00201      6 REKQLYEALKSKHIGLGNEETTRTEYISNIKRDTYASLVAHPAMLEFLSNTY--NKPRQIVHTEMIEKMIRPME 77 
EDK37762      6 KDARLYSANKARYIGLGDPDTPREEFVTNIHRDTYASLGQHDSLLTYTAVAM--NRSPEVVRQQMIKKMVQPKG 77 
XP_002618235  6 RETHQYLHLKGKYIGLGNADTTRDEFLSNIHRDTLASLAMHDNMLTYQATAT--NTHPELVRQALIKRMVQPLS 77 
Q6BLV4        6 KDINQYNQLKSKYIGLGNADITREEFMTNVNRDIYSSLAQHDNILYYNSVII--NEPMELLRQKMIKKMASPIQ 77  Debaryomyces hansenii
CCE41909      6 REKNQYALLKQKYPGIGNADTTRDEFLTTTYNDTIASLAHHKHINYYNSIVT--NKHPNLMKQEMIKKIKSDAt 77 
XP_001527835  6 REKHQYALLKSKYDGIGNSDTTSKEFQTTIYNDTFASLAHHKHLLLHNAVIR--NEHPELVRQEYLKKL-KPMp 76 
EPY53625      6 RSQAKLEQLQARFVGVGHSSTTKYEWMVNQHRDALSSIVGHPPLLAYMSTAL--GESRTQVRQQMLEKMIMPCG 77
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