1FI2,2ET7,2ETE


Conserved Protein Domain Family
cupin_OxOx

?
cd02241: cupin_OxOx 
Oxalate oxidase (germin), cupin domain
Oxalate oxidase (OxOx, also known as germin; EC 1.2.3.4) catalyzes the manganese-dependent oxidative decarboxylation of oxalate to carbon dioxide and hydrogen peroxide (H2O2). It is widespread in fungi and various plant tissues and may play a role in plant signaling and defense. This enzyme has been employed in a widely used assay for detecting urinary oxalate levels. Also, the gene encoding OxOx from barley roots has been expressed in oilseed rape in order to provide a defense against externally supplied oxalic acid. In germin, the predominant protein produced during the early phase of wheat germination, it is believed that H2O2 production is employed as a defense mechanism in response to infection by pathogens. Germin is also a marker of growth onset in cell walls in germinating cereals. The H2O2 produced by OxOx, together with the Ca2+ released by degradation of calcium oxalate, are thought to mediate cell wall cross-linking at high concentrations. Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.
Statistics
?
PSSM-Id: 380368
Aligned: 229 rows
Threshold Bit Score: 130.408
Created: 20-Oct-2004
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
 
Conserved site includes 4 residues -Click on image for an interactive view with Cn3D
Feature 1: Mn binding site [ion binding site], 4 residue positions
Conserved feature residue pattern:H H [QEN] [QH]Click to see conserved feature residue pattern help
Evidence:
  • Structure:1FI2: Hordeum vulgare oxalate oxidase binds manganese; contacts at 4.0A
  • Comment:The four-coordinate metallocenter usually includes three histidines and one glutamate.

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
1FI2_A         2 DPDPLQDFCVAdldgkavsvngh-tckpmseagddFLFSSKLTKAGNtstpngsAVTELDVAEWPgtntlGVSMNRVDFA 80  Hordeum vulgare
EFJ05685      23 DPDPVLDFCVAnnsssgssgs----crnpsavtgqDFVSEILRNMNNtqgpntfNATLASVSTFPglntmGLSIARVDFG 98  Selaginella moe...
EFJ19642      14 DPDPLQDYCLPtqaqqhqc---------ksspspsDFVSRVLGNAPNfqppqtwNASLLSSANFPalntmGLSIARAHLG 84  Selaginella moe...
ERN06382      11 DQNPLQDLCPTlmpnqsifingh-fckapttvlasDFKSSKLNEAGDtdnyvgsSVNLLTAEVFSglntqGLSIARIDYS 89  Amborella trich...
XP_010065197  27 DHENLQDMCPTatsivlfmngy--pckssanisssDFKNSKLSNPGDtdnfcgsAVTMATAADFPglntlGLSIARADME 104 Eucalyptus grandis
Q2R352        24 DSPPLQDVCPMapqgerklfmngffckspstimasDFKTLLLNHAGDldnmvrsSANIITATEFPglntlGISMARTDIA 103 Japanese rice
PWA96139      24 NGDNLQDICPTytspdqsmfvngfpcknpsnistsDFKNLLLSQKGEtdaflrsSVTIVTAAEFPglntlGLSNARTDLE 103 sweet wormwood
Q9FLT3        19 DSDNMQDTCPTapgeqsiffingypcknptkitaqDFKSTKLTEAGDtdnylqsNVTLLTALEFPglntlGLSVSRTDLE 98  thale cress
XP_022153439  27 DSNNVFDTCPTatnksefingf--pcknptivttsDFNSAKLTGPVDtddqfisSVNILTAAEFSglntlGLSISRTDLG 104 Momordica chara...
NP_001241421  26 DCDNLQDTCPAvppnkqtifinglqcknpvnvtaqDFRTTELSKTGPrdi-fgaSLKIVSAAEFIglntlGLSIGRTDLD 104 soybean
Feature 1               # #    #                                         #                       
1FI2_A        81 pgGTNPPHIHpRATEIGMVMKGELLVGILGsldsgNKLYSRVVRaGETFVIPRGLMHFQFNvgktEAYMVVSFNSqnPGI 160 Hordeum vulgare
EFJ05685      99 vgGVVPTHVHpRASELVYVAEGTISAGFVDt---nNVLFARTLQrGDLIIIPRGLLHYLYNvgsePAIAFVVYNSqeAGL 175 Selaginella moe...
EFJ19642      85 vgGTVPLHYHpRASELIYIAEGEVEAGFVDs---nNVLFAQTLQpGDVMILPKGMLHYQYNpgssRATVLASFDSqsPGI 161 Selaginella moe...
ERN06382      90 iyGMVTPHVHpRASEMLYVIDGIIIAGFVAk----NKVFQQILKqGDVFVYPRGLLHFSVNagfgPATSISVFNCqnPGV 165 Amborella trich...
XP_010065197 105 vdGMVLLHSHpRSAEMMYVLKGVVIAGFIDt---eTNLFQKQMReGEVMVIPRGLLHFCLNdgfeVATVFSVLNSqnPGS 181 Eucalyptus grandis
Q2R352       104 vsGAVLPHSHpRASEMMFVHSGSVVAGFFDt---kGKLFQKTLAeGDVFIFPRGLVHFIMNygfgLATTFSVLNSqnPGV 180 Japanese rice
PWA96139     104 vdGLVMPHTHpRSTEMIFVAKGVVIAGFIDt---nSKLFQSVLReGDVFVFPKGLLHYCLNsgfdDALIYSFFNAqnPGV 180 sweet wormwood
Q9FLT3        99 rdGSVPFHSHpRSSEMLFVVKGVVFAGFVDt---nNKIFQTVLQkGDVFVFPKGLLHFCLSggfePATAFSFYNSqnPGV 175 thale cress
XP_022153439 105 tdAIVSPHSHpRATEIFFVNQGIVLAGFLDt---kNRLFQSFLKaGDVMVFPKGLLHFCLNsgyePAIIFSVFNSqnPGV 181 Momordica chara...
NP_001241421 105 gnGLVNFHYHpRATEIIYVTKGVLLAGFVDt---kNQYFQKFLKvGDVFVFPKALFHFFLNtdfeEATVFSVYNSqnPGF 181 soybean
Feature 1                                                     
1FI2_A       161 VFVPLTLFGsdpp------iptpVLTKALrv--eaGVVELLKSKF 197 Hordeum vulgare
EFJ05685     176 QLLGPSLFGsei--------ptpVLASSLsl--neSTIAALRGIY 210 Selaginella moellendorffii
EFJ19642     162 VLPGPGVFGsgi--------rdeVIASSLggl-dhATLEAVKAKF 197 Selaginella moellendorffii
ERN06382     166 VSFSDGIFMsdsg------llerVVRRSFgl--saLEIGHARNVT 202 Amborella trichopoda
XP_010065197 182 VSIAGAMLP--------------FQPNSDd----eDVVNKLRTRL 208 Eucalyptus grandis
Q2R352       181 VGITHAMFApdse------vaegLMARMLsf---rDMGMDDSSSV 216 Japanese rice
PWA96139     181 VDISNAMFGgse---------seMVRVALaklvslNRVEDVRVDD 216 sweet wormwood
Q9FLT3       176 VNIGEVFGIdqe--------hikIMTRCL------ATGSGCRVTD 206 thale cress
XP_022153439 182 VNINGAMFEpad--------snhLVHKFL------ERLKSLSSLS 212 Momordica charantia
NP_001241421 182 VSLSPTTFDttlesldkikkrliSLSASEa----qAQAQDVNSFI 222 soybean

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap