Conserved Protein Domain Family
NIT

?
pfam08376: NIT 
Nitrate and nitrite sensing
The nitrate- and nitrite sensing domain (NIT) is found in receptor components of signal transducing pathways in bacteria which control gene expression, cellular motility and enzyme activity in response to nitrate and nitrite concentrations. The NIT domain is predicted to be all alpha-helical in structure.
Statistics
?
PSSM-Id: 462453
Aligned: 316 rows
Threshold Bit Score: 47.8723
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WP_012233436                     62 LHALQKERAWTALVEGLearppettdvEgerhATpplnraaellrAGGqLRDARAATDESLAQldafLA----------- 130  Sorangium cellulosum...
WP_013283991                     77 VDTVQDERVGAVLFLGAke-------fQt--rAQ-----------YQEgYNRANQRVDQAKSP----YLrqrge----id 128  Micromonospora...
jgi:Snas_3692                    56 VSALQAERGAAVETLTg----------Da--dDS-----------TGS-FTRLVDKTDRAIDD----FRaarvgvadlpg 107 
jgi:Snas_4130                    53 AYQLQSERTLAVQALVNstk----ddkAe-------------------eFLNQQKDTDAAIER----YRssireltdvps 105 
jgi:Snas_2844                    57 AGDLSAERASAVSTL-Tsds----skaSq-------------------sFAKNIRESDESVEE----YKklraeldpeae 108 
KoreaUniversity:VAB18032_07335   13 LYQLDRERQVAVSVVSd----------Ag--gGL-----------NAV-LEQSAV-SDRAIDV----YRqrragldmsqp 63  
ESQ02158                         53 TEHLQHERVAATALVSg----------Qg--dLD-----------T---FRESSETTDRSVTR----FRqgiadlsevpq 102 
WP_023538659                     53 THHLQRERAAATALVSt----------Qg--dPE-----------A---FRETSSATDKSVAR----FRselgqlssvpg 102  Streptomyces niveus...
jgi:Micau_4104                   74 TQRLQAERNAAVGLLLp----------Gs--kVT-----------PAA-FERAVQDTDRAVSR----FHeqrdrlddvpe 125 
jgi:Strop_0757                   71 TQRLQVERIIAVSLLLp----------Ea--eVT-----------AAD-FERAVQDTDRAASR----FHqqrgrldelps 122 
WP_012233436                    131 --ARDlsglprrlardLadgRakvgELGAFRGQAdA-------KTVSLDSVlRVFGGINVSLIRANAGLSE-LSDEGELL 200  Sorangium cellulosum...
WP_013283991                    129 dlPRNfvgl----ldtI---DtqlkDLPATRSQVlNgklkindAD-------QAYRQLIEDLLAIRDSATQ-LAGNNDLS 193  Micromonospora...
jgi:Snas_3692                   108 rvGDIldea----dknL---N----RLESTRNKV-Snr-----tQTSAAVA-FAYRIPIADLIEFRESVPQaGSASSEVG 169 
jgi:Snas_4130                   106 stKINldnv----esgL---D----NLDDVRKRI-Se-----qKQGASAAA-FIYRITIADLLSYRESVPQaGSVPSDVA 167 
jgi:Snas_2844                   109 stEKLltri----dtqL---E----RLDSVRESV-Gt-----kRQTASSVA-FVYRIVIADLLAYRDSVTQvGEAPAEVA 170 
KoreaUniversity:VAB18032_07335   64 avARLvgpl----deqL---R----LLPALREQV-Kar-----sTSLTAVL-VRYRAVIARGLAVREAVGQvGGADGVLA 125 
ESQ02158                        103 naQVMldri----ersV---E----KLVSLRAQA-Rsg-----sSTISALA-FGYRIVIADLIGYRDGIAQaDGVDADIA 164 
WP_023538659                    103 naQSAldri----dqfI---D----EMPSLRAQV-Rsg-----gSTVTALT-FGYRIVIADLIDYRDGIAQaDGVDADVA 164  Streptomyces niveus...
jgi:Micau_4104                  126 svRAVlvra----dasL---A----DVAAQRQRV-Rgd----gLVSLSAVA-FGYRIVIADLDSVLPAVAQ-SGVTPELA 187 
jgi:Strop_0757                  123 svQAVltnv----daaL---T----DVGTQRQRI-Rge----gPVSLSAVA-FGYQGVVADLGNLLPTMAR-SGAPPLLE 184 
WP_012233436                    201 RSIQSIVAVHEFAERASRQHALLAHAFAsTqf--------ePGAFKTLVTLMTEEQlyheEFIANAS--EPAraLYNAAR 270  Sorangium cellulosum...
WP_013283991                    194 DRMRAAAAVARQKEYLTQRRVVVHQALT-Qnq-------ytAALREQFIASGTGQSqslaTFQSVATepDKL--FYEQTV 263  Micromonospora...
jgi:Snas_3692                   170 DKIRASTQLLQSSEYQSLEDVAVLRAID-NgplselhygqiVESGSASDEMRLTFK-------DLADseWRG--WLENSR 239 
jgi:Snas_4130                   168 DRIRASNLLSRSIEYQSIQTETVLRALD-Rge-------lsSAAFQKITAANTGSTdalltFNSLAPteWRE--WLDRAL 237 
jgi:Snas_2844                   171 DELRAGSTLSRAIEFVGLQEVAVLRAGP-Gkt-------ltPSDAEEIAATRLGFDdamltFDRLTTteWQT--LVERAQ 240 
KoreaUniversity:VAB18032_07335  126 DHLRVAAALSQASEYAGIQQAAV--AVG-Sgrv------vsQAVQRDLAATRAGFDeallVVSRRSPtrWRA--WLDQAL 194 
ESQ02158                        165 DRIRAAAALSEAAEYTAQEQVTVMRAQA-Tgg-------ftTASRRTFDASRLGYTesigALYGLGPgeWRT--MLERTL 234 
WP_023538659                    165 DRIRAAAAISRASEHLGQQQVAVMKAQG-Tgg-------ftEASKRTFDATRIGYTeatgSLFDLGPqqWRT--WLERTL 234  Streptomyces niveus...
jgi:Micau_4104                  188 DEIRASAALSRARESVGQQQVAVLQAVA-Arr-------ltPALHAEVVAARSSQDealrEFDGLARpsWRA--LLGRTL 257 
jgi:Strop_0757                  185 DAMRVSAALARAREAVGQQQVMVLQAVA-Anq-------ltPALHAEIVAARASHEealrEFDLSARsgWRS--LLGRTM 254 
WP_012233436                    271 -SNpRVRRADELRAAa------------iGSTDealaidhdaWFEAQQGRVDGL----AAIEEEAISGMR 323  Soran...
WP_013283991                    264 sGP-DLRKADRFTSFvsgnnngsmenapfGADQ---------WDQTMVAN-AKLi---RTVEARLDGNVV 319  Micro...
jgi:Snas_3692                   240 dGA-KMIAAQALEHEaagtppgeelnidrS--A---------WVK----RIDYLagkqRELQGRVDGDVv 293 
jgi:Snas_4130                   238 aGD-ELSLTAT-MEDealrsk-----pgkkidIdp-----gdWAKGMNKRAEQY----EGVQEDIDKAVV 291 
jgi:Snas_2844                   241 i-D-EQGVAATKLERdiarih-----hgekldVdp-----gkWTDLMDSRASAL----LKVEEEIDQDNS 294 
KoreaUniversity:VAB18032_07335  195 tGE-QVLTAQRIDDGiartqvgqrlrvapG--R---------WAAASGERRDRL----HQVQSRIDDDIL 248 
ESQ02158                        235 sGE-KALEARRLEDRisrtgvdqdidvapK--E---------WIKASADRQELL----RSVEKRVDASVH 288 
WP_023538659                    235 sGP-KALEARRLEDTvsrtapdqeltvdpE--K---------WQKASADRLTLL----RSVESRIDDSVL 288  Strep...
jgi:Micau_4104                  258 tGP-DVLAGVRLDGAvsgtgvyepvrlagGAEQ---------WSRVMTSRADLL----AQVQAAVNDDIG 313 
jgi:Strop_0757                  255 tGP-DVLAAVRLDGVvsgtalyepmqlpgGAQQ---------WSRVMTTRANLL----AEVQTVVNRDIA 310 
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap