Conserved Protein Domain Family
GT4_WfcD-like

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cd03795: GT4_WfcD-like 
Escherichia coli alpha-1,3-mannosyltransferase WfcD and similar proteins
This family is most closely related to the GT4 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes.
Statistics
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PSSM-Id: 340826
Aligned: 13 rows
Threshold Bit Score: 450.188
Created: 6-Dec-2005
Updated: 25-Oct-2021
Structure
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Aligned Rows:
 
putative
Feature 1:putative ADP-binding pocket [chemical binding site]
Evidence:
  • Comment:Some of the residues involved in ADP binding bind indirectly.
  • Comment:Based on similarity to sequences with known structure

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                    #                                                                
AAL27341    3 KILLVNKYYHPd-IGGVETVVQQHAQLLKY--EYSVTVLCISKEFSwytknefingvkvircsslgtyfSMPLSITFFLH 79  Shigella boydii
NP_770956  12 SVLHIFKIYYPdlFGGTLTVIRDICASLKD--AFASAVLVCSQSAErreivvndi------pvervrsfGNVLSLPAAPT 83  Bradyrhizobium jap...
NP_254134   2 RVLHFYKTYLSetVGGIEQVIFQLCESSGSw-GIDNHVLTLSSDPHppvvpfggh------vvhrarldLQLASTGFSLS 74  Pseudomonas aerugi...
EDN37986    2 KILHVFKSFYPytYGGIEKFIHELSIATAKkyHVEIHILAMGKENQtidkdfyt--------lhfaktnLNIASTTFSFS 73  Francisella tulare...
CAE53863    3 KVLHFYKTFYPdsYGGVEQVIYQLAKAGTKy-SINSTILSVSKRKVvnpeifegc------isfkakesFSIASTPFSFE 75  Yersinia enterocol...
YP_857398   2 RILHFFKTYYPdaYGGVQQVIYQLAEGAVKr-GHEVDVLCLSAENAgrhfnianh------svhaakedFYIASTGFSWS 74  Aeromonas hydrophi...
EDO09664    4 RVLQISNYYTPh-IGGIEQTCQYLSEGLKD--EYEVKVICFSEDKEtkvqetngi------qiikpgvfLSVARQDLSFS 74  Bacteroides ovatus...
CAA42151   42 KVLHVYRTCYPetKGGVEQVIRFIASGTKPl-GIETKILTLSDNQTssyycegt-------eiisvkksIEISSNGFSWK 113 Vibrio cholerae
AAS55731    2 KILQVNKFYPPv-IGGVEKVVYDLVEGMCS--LAEMEVLVANTEWKyvqeiehka------kihrvpsiGTYFSMPVAPT 72  Aneurinibacillus t...
NP_811776   2 RILQIGKFYPI--RGGIEKVMYDITMGLSQr-QVYCDMLCASAEKQkpenlllndy----arilcvstwKKVAATMLSPA 74  Bacteroides thetai...
ABI98978    5 KVLQFSKFYPPa-VGGIEQVVYDIVQGCSKypHIHNDVLCFNHDLGqpdheitven----lrimrmhtaKIVASTPLSFN 79  Escherichia coli
NP_213362   2 KVLHLGKLCPPn-EGGIEVFSYDLLEYLNSk-GIKADLLCFGNRTFndayrgfn--------ffsckmnVKLNSAPLSYD 71  Aquifex aeolicus VF5
NP_808968   2 KILHLGKFYPL--KGGMEKAILDIVRGISMq-GVTCDLLCVSTEKAgvfplneha------hiyampsvCNVNSVRISPL 72  Bacteroides thetai...
Feature 1                                                                                     
AAL27341   80 YFIn------YLKSDVIINHVPFPLMDLAFFiidr--lvkrKNILFWHSDIVKQkaLKKILRPFIInTINRSTQILTTSP 151 Shigella boydii
NP_770956  84 YPWrlw--rkIAEHDLLALHAPFPLADLVFAfgfg---akrPLVVHWHADIVTHagLRWFIDPLMRrTLRRAKAIIVSDR 158 Bradyrhizobium jap...
NP_254134  75 VFKqfr--elAAEADVVNYHFPWPFMDLVHFltg----mnkPSVVTYHSDIIRQrvLLKLYRPLMSrFLHSVDRIVAASP 148 Pseudomonas aerugi...
EDN37986   74 AIKkfk--elAKQVDIIHYHFPYPYADLLQTmcr----ankPYIVTYHSDIIKQkrLMMLYKPLMKrFLNGAKYILPTSP 147 Francisella tulare...
CAE53863   76 AINhfk--klAENADVIHYHFPYPYMDMVHFfsk----idkPSVVSYHSDILKQktLLKIYKPLMFrFLEDVNVIVATSS 149 Yersinia enterocol...
YP_857398  75 AIVefr--rlAESADIIHYHFPLPYMDIVHFwvn----pkkPTVVSYHSDIVKQkyLLQLYKPLMMsFLNKVDAIVASSP 148 Aeromonas hydrophi...
EDO09664   75 YWGhlykvikTWKPDVIHFHYPNPFVTALLLpiip---rttKLYVQWHLDITKQkkIYPFIKPFETiLLKRADLIAPTSP 151 Bacteroides ovatus...
CAA42151  114 LIRqfk--klSKWADIIHYHYPWPTGDFLSLfgs-----snPSIVTYHSDIIRQkcLKKLYQPLEShFLNQANILVATSP 186 Vibrio cholerae
AAS55731   73 FPLwl----kKIKTDIIHFHFPFPLGKLSYLlvdkianipaKTVVTWHSDIVRQkrFLKLYHPFLKrFLEKVDTIIATSP 148 Aneurinibacillus t...
NP_811776  75 MIFrlr--kiNKEYDIIHIHHPDPMACLALFlsg----ykgPVVLHWHSDILKQkmLLKLYSPLQNwLLRRAKVIVGTTP 148 Bacteroides thetai...
ABI98978   80 IFKrfl--klRDEYDLVHFHVPNPIATFASFfvk-----knKYIVHWHSDIVKQkkLLCLFKPFQNiMLRRAARIIVTSD 152 Escherichia coli
NP_213362  72 FVKtfk--kiEKNYDIIHVHSPNPLAEILSLfs------hkKVVAHWHSDIVRQkfTYFFYKPFQHmYLKKAIRIICTSP 143 Aquifex aeolicus VF5
NP_808968  73 LIPtlr--klCPNYDIIHIHCPNPMANLALYlsg----yrgKVVLHWHSDILKQkyALKLYKPLQTwLIRRADVIIGTSP 146 Bacteroides thetai...
Feature 1                                                                                     
AAL27341  152 NLKansEDIGEYqKKTDVLPLFINSNVINgyik------------------------------------------nlnaE 189 Shigella boydii
NP_770956 159 VLVdntPLLREFeDKYHVVPFGIDITGYDwpkie----------------------------------------phhvnD 198 Bradyrhizobium jap...
NP_254134 149 NYFstsDVLRQYrEKTRVITYGLDKDGYPkpatqrl-------------------------------------ehwrekL 191 Pseudomonas aerugi...
EDN37986  148 NYLetsETLREIkVPKKVIPMSLNKSDYNideenykywqqklnfrdtclreydnsivitnsdpesplynqnyshwknniG 227 Francisella tulare...
CAE53863  150 NYCktsEVLLRFkNKVRIIPIGLNKESYPvvdesrf-------------------------------------eywrqrF 192 Yersinia enterocol...
YP_857398 149 NYVktsPILSSLkKNVEVIPFGLEKVSAChanlsll-------------------------------------nkwndkI 191 Aeromonas hydrophi...
EDO09664  152 NYRdssKTLFPFrNKTTILPSAIDIQKLNvntgdiei----------------------------------iqrikdkaK 197 Bacteroides ovatus...
CAA42151  187 QYAhtsENLLRHkNKVKIIPLAVDENTYPipsndni-------------------------------------nkwrekV 229 Vibrio cholerae
AAS55731  149 NMVeasPYLKEHkDKCRVIPLGIDVKEWEktdklfen----------------------------------vkkvreevA 194 Aneurinibacillus t...
NP_811776 149 VYVqesPFLENIqRKVISVPIGIDEMKPVpgrvaq---------------------------------------ikeryA 189 Bacteroides thetai...
ABI98978  153 KYGresQQLKDYsEKLITIPIGISPIQKTinqelfq-------------------------------------alkkefP 195 Escherichia coli
NP_213362 144 QYLqtsKQLEGFrNKAVVIPLGLNPKRLMsdyvdekf----------------------------------kdfielknK 189 Aquifex aeolicus VF5
NP_808968 147 VYLensPFLRGMeHKFRIVPLGCEAIVPSadrvsd---------------------------------------irkqyK 187 Bacteroides thetai...
Feature 1            ###                                                              #       
AAL27341  190 KKYDFIFFGRLcYYKGVDILLDAVKILknkgaePEIFMAGDGDLVNYIenei-ienKIKNITFIKRFLtEEEKYHYLsiS 268 Shigella boydii
NP_770956 199 RGRLVLACGRLvPYKGFDVLIRAAAAHn-----FETWIIGEGVERPRLeqliqelgLGDRVRLLGSVD-DCERIKLMclA 272 Bradyrhizobium jap...
NP_254134 192 GPRFFLFVGVMrYYKGLHILLDALQGTd-----YPVVIVGAGPLQAELyaqa-aalGLRNVHFLGRVD-DEDKVALLqlS 264 Pseudomonas aerugi...
EDN37986  228 FEKFFIYIGALrYYKGLDVLIDAMQGQd-----YPLVIVGDGNQKELLeqkv-klnKLQNVKFFGALD-DKDKLSLLklS 300 Francisella tulare...
CAE53863  193 KTPFYLFIGALrYYKGLHILLNAMVRSr-----YPLVIVGAGSIEADLkkqa-hklGLDNVFFLGLQS-DVDKVILLklC 265 Yersinia enterocol...
YP_857398 192 KGRFFLFIGFLrYYKGLSFVLDAMRELd-----YPLIIIGEGPCEKDLksqa-dklGLRNTFFIGPVS-DDEKNILLelC 264 Aeromonas hydrophi...
EDO09664  198 GRKIVFFIGRHvLHKGIQDLIEAEQLIkn---dCYIFIGGVGPITDEMka----icKSNRVEFVGRLS-DQEKKCYYhaA 269 Bacteroides ovatus...
CAA42151  230 GEGFFLFVGVLrYYKGLDFLLEAAKINq-----LPVIIAGDGPERVKLesyi-akhNLENVKLVGFIS-EEDKVILHllS 302 Vibrio cholerae
AAS55731  195 IKPIILFVGRLvYYKGVEYLIEAMTEIn-----ASLFLVGEWPLKPLLqkraeelgITEKINFLGGAS-KEQLVTYLhaC 268 Aneurinibacillus t...
NP_811776 190 GKKIIFSLGRLvEYKGYEYLIKASQKLnd---dYIILIGGKGPLQEYLqslidelgVRKKVKLLGFID-DKDLPDYFgaC 265 Bacteroides thetai...
ABI98978  196 FKKIVFSLGRLaYYKGFEYLIKSARYLnd---dCVILIGGAGELKDDLqaliqkynLHDKVRLLGRID-DVDLSTYYifS 271 Escherichia coli
NP_213362 190 GRKIVLSIGRLvEYKGYKYLIEAAKYInn---nISIVIAGSGPLFQSLeekietlnLKEKVFLFGRIN-NVSLYMKN--C 263 Aquifex aeolicus VF5
NP_808968 188 GKRIIFALGRLiAYKGFRFLIEAARYLdd---gYVVLIGGTGPLYNKLlkqineenLQGKVCLLGYVT-DDEVAQYYgaC 263 Bacteroides thetai...
Feature 1                     #                                                               
AAL27341  269 KCFLFPSVAASEAFGITQLEAMSl-GLPVINTNLNTGVPFVSl-nGVTGITVTAGnPDDLANAMLSLLRDDEKYESFKTN 346 Shigella boydii
NP_770956 273 DVFVMPSVTNAETFGLVQLEAMAa-GRPVVNTALDTAVPHVAr-hGMEAITVPPGdAEKLGEAIDTLIRDPERRRSMGLA 350 Bradyrhizobium jap...
NP_254134 265 YAMVFPSHLRSEAFGISLLEGAMy-GKPMISSEIGTGTSYINi-hGETGLVVPPSqPAAFRQAMRWLWEHPQQAEEMGRN 342 Pseudomonas aerugi...
EDN37986  301 YALVLPSNIRTEAFGLVLLEASMf-AKPMITCEIGTGTTFVNi-nKQTGLVAKPNdSQDLAEKLKELWQDEQKAQEYGAN 378 Francisella tulare...
CAE53863  266 FCVIFPSHLRTEAFGITLLEGAMf-GKPLISSEIGTGTTYINi-hQETGVVVPPSdPIKLREAMDFLWDNPNIAERYGIE 343 Yersinia enterocol...
YP_857398 265 YAVVFPSHLRSEAFGMTLLEASMy-GKPMITCEIGTGTTYINl-hGETGLAIEPAnSDALSSAMKKLWEDQDETERMGKN 342 Aeromonas hydrophi...
EDO09664  270 DIFAFPSYTKAEGFGLTLAEAMYcnAVPVTYTIEGSGVNWVSl-hEVTGLEVPNRnVAEYAKAIDELLSDDKKRNDFAET 348 Bacteroides ovatus...
CAA42151  303 KAFVFPSHLRSEAFGISLIEAQMy-CKAIISSDIGTGSSYVNi-nGETGLVVPPAdSQSFSDAMLKIEHDTKLCEKLGIN 380 Vibrio cholerae
AAS55731  269 DIFVLPSVERSEAFGIVQLEAMAc-GKPIVSTNLATGVPFVNq-dGKTGIVVPPKdIKSLTQALTFLIENESVRKQYGER 346 Aneurinibacillus t...
NP_811776 266 DLFCLSSIWKTEAFGIVQIEAMSc-GKPVIAMNIPESGVSWVninRFSGINVKPEdADALAEAITAVLTDECLYEELARG 344 Bacteroides thetai...
ABI98978  272 DVFCMPSIEKSEAFGVVQLEAMLy-SLPIVSTKIPGSGVDWVnadGVSGITVEPKnEHAIAEAINKLLSDDSLRHSLGKN 350 Escherichia coli
NP_213362 264 DVFCLPSITRNEAFGLVLVEALYf-GKPLITTDVEGSGISYVnqnGITGLVVKPKdPKALAEAINKILKNENLYKQFSEN 342 Aquifex aeolicus VF5
NP_808968 264 DVFCLSSVWKTEAFGLVQIEAMSc-GKPVVATNIEGSGVPWVnrnGYSGLNVEPEnPEALAKAIMKITSSEEAYRTYSRQ 342 Bacteroides thetai...
Feature 1                    
AAL27341  347 CKVRVSELFEENVVK 361 Shigella boydii
NP_770956 351 ARTRALTRYSATAFK 365 Bradyrhizobium japonicum USDA 110
NP_254134 343 AEARYRQLFTAEEMG 357 Pseudomonas aeruginosa PAO1
EDN37986  379 AKARFDDIFSLNKMV 393 Francisella tularensis subsp. novicida GA99-3548
CAE53863  344 AEKRFKEIFTADLMA 358 Yersinia enterocolitica (type 0:9)
YP_857398 343 AKVRFEQNFTADIMI 357 Aeromonas hydrophila subsp. hydrophila ATCC 7966
EDO09664  349 AHQRIVENFTIEKEI 363 Bacteroides ovatus ATCC 8483
CAA42151  381 ARKRFEQEFTAHRYA 395 Vibrio cholerae
AAS55731  347 GKERVYEHFTREKMV 361 Aneurinibacillus thermoaerophilus
NP_811776 345 ARRRYETMFTKELMT 359 Bacteroides thetaiotaomicron VPI-5482
ABI98978  351 AHNRLLELFTVDRMS 365 Escherichia coli
NP_213362 343 AKKRFKEFEISNIGD 357 Aquifex aeolicus VF5
NP_808968 343 ARAHYNKMFVKERML 357 Bacteroides thetaiotaomicron VPI-5482

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